FFCP PHASE1:Hg19::chr9:139937521..139937538,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56654|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=7899|TSSclassifier=S|UniProt=Q9NQX5|association_with_transcript=0bp_to_AF283247_5end|description=CAGE_peak_8_at_NPDC1_5end|id=chr9:139937521..139937538,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0000358;2.48e-10;1!UBERON:0009143;6.32e-10;1!UBERON:0001045;6.32e-10;1!UBERON:0010226;6.32e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!9.03e-44!115;UBERON:0000477!4.58e-11!286;UBERON:0004111!5.46e-11!241;UBERON:0001049!1.26e-10!57;UBERON:0005068!1.26e-10!57;UBERON:0006241!1.26e-10!57;UBERON:0007135!1.26e-10!57;UBERON:0003080!7.01e-10!42;UBERON:0002616!3.37e-09!59;UBERON:0000025!3.43e-09!194;UBERON:0002780!4.55e-09!41;UBERON:0001890!4.55e-09!41;UBERON:0006240!4.55e-09!41;UBERON:0001017!7.54e-09!82;UBERON:0005743!1.36e-08!86;UBERON:0000955!2.19e-08!69;UBERON:0006238!2.19e-08!69;UBERON:0003075!5.97e-08!86;UBERON:0007284!5.97e-08!86;UBERON:0000073!8.34e-08!94;UBERON:0001016!8.34e-08!94;UBERON:0002346!8.38e-08!90;UBERON:0000468!4.47e-07!659|ontology_enrichment_uberon_v019=UBERON:0000996;1.72e-10;1!UBERON:0002135;2.48e-10;1!UBERON:0002171;2.48e-10;1!UBERON:0006518;2.48e-10;1!UBERON:0008949;2.48e-10;1!UBERON:0000101;2.48e-10;1!UBERON:0002167;2.48e-10;1!UBERON:0002084;6.32e-10;1!UBERON:0001154;6.32e-10;1!UBERON:0001153;6.32e-10;1!UBERON:0009854;6.32e-10;1!UBERON:0002082;6.32e-10;1|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.19e-14,114;UBERON:0000996,1.80e-10,1;UBERON:0002135,2.37e-10,1;UBERON:0002171,2.59e-10,1;UBERON:0006518,2.59e-10,1;UBERON:0008949,2.59e-10,1;UBERON:0000101,2.59e-10,1;UBERON:0002167,2.59e-10,1;UBERON:0002084,3.40e-10,1;UBERON:0002082,3.40e-10,1;UBERON:0010226,3.40e-10,1;UBERON:0001154,9.82e-10,1;UBERON:0001153,9.82e-10,1;UBERON:0001045,9.82e-10,1;UBERON:0004921,5.89e-07,118|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0.838998872419812,0.275118041940067,0.417989933073621,1.03366703667732,0.35576626268671,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.298897361103602,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.118306800039844,0,0.482022059766964,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0.561320188866147,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.2023155617111,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,1.15755106853338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.18714054040822,3.51619630252546,0,0,0,0,0,0,0,0.281338832821026,0,0.329607748453519,0,0,1.10513566212459,0,0,0,0,0,0,0,0.591860433821602,0,0,0.969332746095218,0.0927680981618513,0,0.260427761085233,0,2.89999830173917,0,0.254253650292766,0,0,0.583209226766509,0.173624994933292,0.885741385813839,0.241192877250816,0,0.221158519862449,0.295547618953547,0.219385397153973,0.10893846351899,0,1.53900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.353830258013357,0,0,0.123563938946503,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.821425535170343,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.52418000472609,0,0.0967563312890851,0,0.0821154570532092,1.35784623083787,0.0882561266915003,0,0,0,0,0,0,0.640358984218058,0,0.144090417154106,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0,0,0.273810757783986,0,0,0,2.51354161145029,0.687481272035051,0.71787302457681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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56654 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7899 | |||
|TSSclassifier=S | |||
|UniProt=Q9NQX5 | |||
|association_with_transcript=0bp_to_AF283247_5end | |||
|description=CAGE_peak_8_at_NPDC1_5end | |||
|id=chr9:139937521..139937538,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.48e-10;1!UBERON:0009143;6.32e-10;1!UBERON:0001045;6.32e-10;1!UBERON:0010226;6.32e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.03e-44!115;UBERON:0000477!4.58e-11!286;UBERON:0004111!5.46e-11!241;UBERON:0001049!1.26e-10!57;UBERON:0005068!1.26e-10!57;UBERON:0006241!1.26e-10!57;UBERON:0007135!1.26e-10!57;UBERON:0003080!7.01e-10!42;UBERON:0002616!3.37e-09!59;UBERON:0000025!3.43e-09!194;UBERON:0002780!4.55e-09!41;UBERON:0001890!4.55e-09!41;UBERON:0006240!4.55e-09!41;UBERON:0001017!7.54e-09!82;UBERON:0005743!1.36e-08!86;UBERON:0000955!2.19e-08!69;UBERON:0006238!2.19e-08!69;UBERON:0003075!5.97e-08!86;UBERON:0007284!5.97e-08!86;UBERON:0000073!8.34e-08!94;UBERON:0001016!8.34e-08!94;UBERON:0002346!8.38e-08!90;UBERON:0000468!4.47e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;1.72e-10;1!UBERON:0002135;2.48e-10;1!UBERON:0002171;2.48e-10;1!UBERON:0006518;2.48e-10;1!UBERON:0008949;2.48e-10;1!UBERON:0000101;2.48e-10;1!UBERON:0002167;2.48e-10;1!UBERON:0002084;6.32e-10;1!UBERON:0001154;6.32e-10;1!UBERON:0001153;6.32e-10;1!UBERON:0009854;6.32e-10;1!UBERON:0002082;6.32e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.19e-14,114;UBERON:0000996,1.80e-10,1;UBERON:0002135,2.37e-10,1;UBERON:0002171,2.59e-10,1;UBERON:0006518,2.59e-10,1;UBERON:0008949,2.59e-10,1;UBERON:0000101,2.59e-10,1;UBERON:0002167,2.59e-10,1;UBERON:0002084,3.40e-10,1;UBERON:0002082,3.40e-10,1;UBERON:0010226,3.40e-10,1;UBERON:0001154,9.82e-10,1;UBERON:0001153,9.82e-10,1;UBERON:0001045,9.82e-10,1;UBERON:0004921,5.89e-07,118 | |||
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|short_description=p8@NPDC1 | |||
}} |
Revision as of 08:20, 14 September 2013
Short description: | p8@NPDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_NPDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AF283247_5end |
EntrezGene: | NPDC1 |
HGNC: | 7899 |
UniProt: | Q9NQX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.19e-14 | 114 |
vagina | 1.80e-10 | 1 |
mitral valve | 2.37e-10 | 1 |
lower lobe of right lung | 2.59e-10 | 1 |
right lung lobe | 2.59e-10 | 1 |
lower lobe of lung | 2.59e-10 | 1 |
lobe of lung | 2.59e-10 | 1 |
right lung | 2.59e-10 | 1 |
heart left ventricle | 3.40e-10 | 1 |
cardiac ventricle | 3.40e-10 | 1 |
future cardiac ventricle | 3.40e-10 | 1 |
vermiform appendix | 9.82e-10 | 1 |
caecum | 9.82e-10 | 1 |
midgut | 9.82e-10 | 1 |
subdivision of digestive tract | 5.89e-07 | 118 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.