FFCP PHASE1:Hg19::chr9:2621595..2621606,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7436|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12698|TSSclassifier=S|UniProt=P98155,Q5VVF5,A8K0G2|association_with_transcript=-186bp_to_NM_001018056,NM_003383,uc003zhk.1,uc003zhl.1,uc003zhm.1,uc003zhn.1_5end|description=CAGE_peak_5_at_VLDLR_5end|id=chr9:2621595..2621606,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.88e-10!115;UBERON:0003075!2.66e-08!86;UBERON:0007284!2.66e-08!86;UBERON:0000073!9.14e-08!94;UBERON:0001016!9.14e-08!94;UBERON:0005743!9.18e-08!86;UBERON:0002346!9.82e-08!90;UBERON:0001017!1.38e-07!82;UBERON:0001049!2.00e-07!57;UBERON:0005068!2.00e-07!57;UBERON:0006241!2.00e-07!57;UBERON:0007135!2.00e-07!57;UBERON:0000955!6.09e-07!69;UBERON:0006238!6.09e-07!69|ontology_enrichment_uberon_v019=UBERON:0004151;4.29e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0004151,2.72e-07,3|phase1_expression=0.363356758541113,0.428201047781966,0.986680828671798,0,0,0,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0.313454721478088,0.85870796139317,0.410623275218653,0.376627918784408,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,1.15877215168659,0,0.486634870302636,0,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,1.43418310374407,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0.113432183160021,0.358779271377724,0.213557388818567,0.423863802319124,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.194874010322397,0.504867548488229,0,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.343135620597051,0.109750285408626,0,0.100528972411631,0,0,0,0,0.115930404975077,0.821860859650752,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0.300343057843917,0.571652865261156,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.499864955910285,0,0,0,0.718874566474748,0,0,0,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0,0.502548796003046,0,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0.248107807818777,0.153461973288062,0.280660094433074,0.384417447767103,1.53512174720011,0.160853921143607,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0.552485933615378,0.459257792658427,0,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0,0,0,0,0,0.650756789328606,0.103041011647722,0.183138929636687,0.082509499920588,0,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0.330569830721956,0.576570202095319,0.255225424989168,0.4046311234222,0,1.25924938732256,0,0,0,0,0,0.715624433709956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.272999822815972,1.55545975149084,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.392996164052485,0,0,0.422215270595328,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,2.8853842595289,0.142283686696828,0,0,0,0,0,0,0,0.626719583092093,0,0,0.642352300414798,0,0,0.343505344755765,1.84344458585075,0.447352215784832,0.333698283423817,0.390776190804081,0,0,0,0,0,0,0.879049075631364,0,0.222886768554957,0.284136146806413,0.71623345421307,0,0,1.9882952955326,0.281338832821026,0.111308705022906,0,0,0.597743964753209,0,1.0077309914171,1.94310496754094,0.246169610922139,0,0,0.537063524026827,0.511572370226872,0.394573622547734,0,0,1.93866549219044,0.185536196323703,0,0.520855522170466,0.262379999988587,0,0.341380344856499,0.254253650292766,0,0,0,0.694499979733169,0,0,0,0.884634079449797,1.77328571372128,0,0,0.278847488557207,0,0.227884111694002,0.69169171316418,3.05175990993225,0.869178975376065,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0.565412285735763,0.216388639742091,0,0,0,0,0,0,0.539209063845416,0.802577647298789,0.468528891450678,0,0,0,0,0,0.61214552326098,0.063186579628488,0.450970258243478,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0.529536760149002,0.90392296312213,0.137041924646751,0,0.189932387867636,0.7822055309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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7436 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12698 | |||
|TSSclassifier=S | |||
|UniProt=P98155,Q5VVF5,A8K0G2 | |||
|association_with_transcript=-186bp_to_NM_001018056,NM_003383,uc003zhk.1,uc003zhl.1,uc003zhm.1,uc003zhn.1_5end | |||
|description=CAGE_peak_5_at_VLDLR_5end | |||
|id=chr9:2621595..2621606,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.88e-10!115;UBERON:0003075!2.66e-08!86;UBERON:0007284!2.66e-08!86;UBERON:0000073!9.14e-08!94;UBERON:0001016!9.14e-08!94;UBERON:0005743!9.18e-08!86;UBERON:0002346!9.82e-08!90;UBERON:0001017!1.38e-07!82;UBERON:0001049!2.00e-07!57;UBERON:0005068!2.00e-07!57;UBERON:0006241!2.00e-07!57;UBERON:0007135!2.00e-07!57;UBERON:0000955!6.09e-07!69;UBERON:0006238!6.09e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;4.29e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,2.72e-07,3 | |||
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| |||
|short_description=p5@VLDLR | |||
}} |
Revision as of 08:39, 14 September 2013
Short description: | p5@VLDLR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_VLDLR_5end |
Coexpression cluster: | NA |
Association with transcript: | -186bp_to_NM_001018056, NM_003383, uc003zhk.1, uc003zhl.1, uc003zhm.1, uc003zhn.1_5end |
EntrezGene: | VLDLR |
HGNC: | 12698 |
UniProt: | P98155Q5VVF5A8K0G2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 2.72e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.