FFCP PHASE1:Mm9::chr6:121306836..121306865,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14411|HGNC=|MCL_coexpression_id=56|UniProt=|association_with_transcript=0bp_to_ENSMUST00000170582,ENSMUST00000171874_5end|description=CAGE_peak_4_at_Slc6a12_5end|id=chr6:121306836..121306865,+|ontology_enrichment_celltype=CL:0000325!7.15e-10!2;CL:0000217!7.15e-10!2;CL:0000328!7.15e-10!2;CL:0002573!7.15e-10!2;CL:0002376!7.15e-10!2;CL:0000218!7.15e-10!2;CL:0000692!7.15e-10!2;CL:0002377!7.15e-10!2;CL:0002375!7.15e-10!2;CL:0000215!7.29e-07!3;CL:0000630!7.29e-07!3|ontology_enrichment_celltype_v019_2=CL:0002476,7.56e-10,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!8.84e-16!3;UBERON:0000478!8.84e-16!3;UBERON:0000158!8.84e-16!3;UBERON:0005795!4.88e-12!4;UBERON:0000995!4.88e-12!4;UBERON:0001987!3.81e-11!2;UBERON:0003124!3.81e-11!2;UBERON:0004340!3.81e-11!2;UBERON:0003975!1.00e-09!5|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.10e-52,3;UBERON:0000478,1.10e-52,3;UBERON:0000158,1.10e-52,3;UBERON:0005795,4.62e-40,4;UBERON:0000995,4.62e-40,4;UBERON:0001987,6.35e-36,2;UBERON:0003124,6.35e-36,2;UBERON:0004340,6.35e-36,2;UBERON:0003975,2.89e-32,5;UBERON:0003134,1.53e-20,8;UBERON:0006834,7.74e-19,1;UBERON:0000305,1.74e-18,1;UBERON:0004175,2.30e-18,9;UBERON:0000474,2.30e-18,9;UBERON:0003100,3.43e-15,11;UBERON:0003133,2.18e-07,24;UBERON:0004923,2.41e-07,24;UBERON:0004871,4.77e-07,3;UBERON:0005156,7.12e-07,26;UBERON:0000990,7.12e-07,26|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.19109432242185,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,107.479642293179,30.0801540626625,0,0.49465875882444,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,44.8561116328325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p4@Slc6a12}} | ||
|EntrezGene=14411 | |||
|HGNC= | |||
|MCL_coexpression_id=56 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000170582,ENSMUST00000171874_5end | |||
|description=CAGE_peak_4_at_Slc6a12_5end | |||
|id=chr6:121306836..121306865,+ | |||
|ontology_enrichment_celltype=CL:0000325!7.15e-10!2;CL:0000217!7.15e-10!2;CL:0000328!7.15e-10!2;CL:0002573!7.15e-10!2;CL:0002376!7.15e-10!2;CL:0000218!7.15e-10!2;CL:0000692!7.15e-10!2;CL:0002377!7.15e-10!2;CL:0002375!7.15e-10!2;CL:0000215!7.29e-07!3;CL:0000630!7.29e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,7.56e-10,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!8.84e-16!3;UBERON:0000478!8.84e-16!3;UBERON:0000158!8.84e-16!3;UBERON:0005795!4.88e-12!4;UBERON:0000995!4.88e-12!4;UBERON:0001987!3.81e-11!2;UBERON:0003124!3.81e-11!2;UBERON:0004340!3.81e-11!2;UBERON:0003975!1.00e-09!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.10e-52,3;UBERON:0000478,1.10e-52,3;UBERON:0000158,1.10e-52,3;UBERON:0005795,4.62e-40,4;UBERON:0000995,4.62e-40,4;UBERON:0001987,6.35e-36,2;UBERON:0003124,6.35e-36,2;UBERON:0004340,6.35e-36,2;UBERON:0003975,2.89e-32,5;UBERON:0003134,1.53e-20,8;UBERON:0006834,7.74e-19,1;UBERON:0000305,1.74e-18,1;UBERON:0004175,2.30e-18,9;UBERON:0000474,2.30e-18,9;UBERON:0003100,3.43e-15,11;UBERON:0003133,2.18e-07,24;UBERON:0004923,2.41e-07,24;UBERON:0004871,4.77e-07,3;UBERON:0005156,7.12e-07,26;UBERON:0000990,7.12e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.19109432242185,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,107.479642293179,30.0801540626625,0,0.49465875882444,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,44.8561116328325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Slc6a12 | |||
}} |
Revision as of 08:45, 14 September 2013
Short description: | p4@Slc6a12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Slc6a12_5end |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | 0bp_to_ENSMUST00000170582, ENSMUST00000171874_5end |
EntrezGene: | Slc6a12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 7.56e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.10e-52 | 3 |
extraembryonic structure | 1.10e-52 | 3 |
membranous layer | 1.10e-52 | 3 |
embryonic uterus | 4.62e-40 | 4 |
uterus | 4.62e-40 | 4 |
placenta | 6.35e-36 | 2 |
chorion | 6.35e-36 | 2 |
allantois | 6.35e-36 | 2 |
internal female genitalia | 2.89e-32 | 5 |
female reproductive organ | 1.53e-20 | 8 |
uterus or analog | 7.74e-19 | 1 |
amnion | 1.74e-18 | 1 |
internal genitalia | 2.30e-18 | 9 |
female reproductive system | 2.30e-18 | 9 |
female organism | 3.43e-15 | 11 |
reproductive organ | 2.18e-07 | 24 |
organ component layer | 2.41e-07 | 24 |
somatic layer of lateral plate mesoderm | 4.77e-07 | 3 |
reproductive structure | 7.12e-07 | 26 |
reproductive system | 7.12e-07 | 26 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.