FFCP PHASE1:Mm9::chr6:124813895..124814014,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14788|HGNC=|MCL_coexpression_id=1|UniProt=Q3UN16|association_with_transcript=0bp_to_ENSMUST00000046893,NM_013533,uc009dsg.1,uc009dsh.1_5end|description=CAGE_peak_1_at_Gpr162_5end|id=chr6:124813895..124814014,-|ontology_enrichment_celltype=CL:0000117!9.30e-13!23;CL:0000337!9.30e-13!23;CL:0000540!3.11e-11!33;CL:0000047!3.11e-11!33;CL:0000031!3.11e-11!33;CL:0000404!3.11e-11!33;CL:0002319!1.57e-10!43;CL:0000221!1.58e-10!44;CL:0000133!1.58e-10!44;CL:0000393!8.30e-08!39;CL:0000211!8.30e-08!39;CL:0000055!3.98e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.40e-13,23;CL:0000337,1.40e-13,23;CL:0000540,3.50e-11,33;CL:0000047,3.50e-11,33;CL:0000031,3.50e-11,33;CL:0000404,3.50e-11,33;CL:0000221,2.52e-10,44;CL:0000133,2.52e-10,44;CL:0002319,2.54e-10,43;CL:0000393,2.87e-07,39;CL:0000211,2.87e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.79e-30!73;UBERON:0005743!6.79e-30!73;UBERON:0000073!2.29e-28!75;UBERON:0001016!2.29e-28!75;UBERON:0002346!4.29e-28!71;UBERON:0003075!4.29e-28!71;UBERON:0007284!4.29e-28!71;UBERON:0000033!1.98e-27!63;UBERON:0001049!3.92e-26!52;UBERON:0005068!3.92e-26!52;UBERON:0006241!3.92e-26!52;UBERON:0007135!3.92e-26!52;UBERON:0004121!1.45e-25!102;UBERON:0000924!1.45e-25!102;UBERON:0006601!1.45e-25!102;UBERON:0000955!8.26e-25!50;UBERON:0006238!8.26e-25!50;UBERON:0002616!4.29e-24!49;UBERON:0003056!3.90e-23!49;UBERON:0000153!1.93e-22!94;UBERON:0007811!3.25e-22!86;UBERON:0003080!1.62e-19!40;UBERON:0002780!6.72e-19!39;UBERON:0001890!6.72e-19!39;UBERON:0006240!6.72e-19!39;UBERON:0002020!8.74e-18!34;UBERON:0002791!8.51e-15!29;UBERON:0003528!8.51e-15!29;UBERON:0001893!8.51e-15!29;UBERON:0000956!1.35e-10!21;UBERON:0001869!1.35e-10!21;UBERON:0000203!1.35e-10!21;UBERON:0002619!7.31e-09!17;UBERON:0000468!1.03e-08!333;UBERON:0002021!1.16e-07!10;UBERON:0000411!1.16e-07!10;UBERON:0001950!1.16e-07!10;UBERON:0003076!3.85e-07!12;UBERON:0003057!3.85e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.75e-31,73;UBERON:0002346,6.87e-31,64;UBERON:0003075,6.87e-31,64;UBERON:0007284,6.87e-31,64;UBERON:0000073,2.86e-29,54;UBERON:0001016,3.86e-29,75;UBERON:0001049,6.06e-28,52;UBERON:0005068,6.06e-28,52;UBERON:0006241,6.06e-28,52;UBERON:0007135,6.06e-28,52;UBERON:0004121,1.78e-25,95;UBERON:0000924,1.78e-25,95;UBERON:0006601,1.78e-25,95;UBERON:0003056,1.00e-24,49;UBERON:0000955,1.12e-24,47;UBERON:0006238,1.12e-24,47;UBERON:0010371,1.28e-24,73;UBERON:0010314,1.70e-24,92;UBERON:0002616,6.37e-24,46;UBERON:0003080,7.77e-21,40;UBERON:0002780,3.57e-20,39;UBERON:0001890,3.57e-20,39;UBERON:0006240,3.57e-20,39;UBERON:0002020,5.61e-19,34;UBERON:0003528,9.08e-16,29;UBERON:0002791,9.08e-16,29;UBERON:0001893,9.08e-16,29;UBERON:0000956,2.93e-11,21;UBERON:0001869,2.93e-11,21;UBERON:0000203,2.93e-11,21;UBERON:0002619,2.12e-09,17;UBERON:0002021,4.12e-08,10;UBERON:0000411,4.12e-08,10;UBERON:0001950,4.12e-08,10;UBERON:0003076,1.49e-07,12;UBERON:0003057,1.49e-07,12|phase1_expression=10.5698239089164,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0.936258105287974,0.171217968225505,0.478632953972018,0.171200729931206,0.437102012094987,0.333109761815663,0,0,0,0.274228867211478,0.42438965179803,13.436839843869,0.198581902401771,0.261199789138935,0,0.45881856213434,0,0,0,0,0.252030129759931,0,0,0.61506478758457,0,0,0,0.408338712524738,0,0,0,0,0,0,0.629484089877886,0.709638518536602,0.183546752161682,6.25913075478431,5.01457859675027,2.63623419281366,1.94429899074283,1.1198913730029,4.31257693094915,0,0,0,0.257259436035947,0,0.515672092277442,52.1976469017762,55.0150618442914,46.2696924559511,2.03306719241479,1.77858959222228,39.1456377017409,42.5212535903799,33.3925654024667,11.9840044207362,14.6002956022191,15.0349937847293,16.8757422914613,19.1395714829758,52.2741301458961,46.1615250588872,14.0864419097197,15.1435844208813,9.19218786610021,36.3382407297983,39.3277001302378,43.9314685112856,51.1718796393152,56.0819255282771,46.8822033501084,42.4358158482099,34.8912818219642,39.2691496786402,44.7835449919975,44.277592728521,49.9550514811806,0.227178579999552,0.529000920747499,0.289864488701678,0,0.679971333707751,0,0,0.448026887097336,1.96622188184453,0,0.259786004602869,0,2.81686839553361,0,0,0,0,0,0,1.48439043634778,1.8125651855302,0.593768556259299,4.8575891494518,4.87144765299426,2.53677046981664,4.06951129492081,2.23418543557839,1.0053327306374,0,0.289198713839823,0.884610551949874,0.970601099684455,0.220841518460394,0.484875253135222,0,72.6096376588637,85.6637030867031,0.510914110417183,0,0,0,48.5321671671626,32.9400434029411,22.7434377324285,54.059363579798,78.5046454004115,48.6224024269371,49.1591027095306,2.13862664085664,0.870848794270651,0.505445516867349,6.31325567659422,7.026503919986,15.8632452059096,15.6654052930654,21.701493768343,26.3981616707152,29.7223831060852,41.5098639799599,26.3877438153796,1.5089759505299,3.21480336285293,5.27853372491847,4.82230611340665,3.61461423993277,3.1342694986995,2.26360350048738,2.7864797354589,0,0,0,1.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| ||
|EntrezGene=14788 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q3UN16 | |||
|association_with_transcript=0bp_to_ENSMUST00000046893,NM_013533,uc009dsg.1,uc009dsh.1_5end | |||
|description=CAGE_peak_1_at_Gpr162_5end | |||
|id=chr6:124813895..124814014,- | |||
|ontology_enrichment_celltype=CL:0000117!9.30e-13!23;CL:0000337!9.30e-13!23;CL:0000540!3.11e-11!33;CL:0000047!3.11e-11!33;CL:0000031!3.11e-11!33;CL:0000404!3.11e-11!33;CL:0002319!1.57e-10!43;CL:0000221!1.58e-10!44;CL:0000133!1.58e-10!44;CL:0000393!8.30e-08!39;CL:0000211!8.30e-08!39;CL:0000055!3.98e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.40e-13,23;CL:0000337,1.40e-13,23;CL:0000540,3.50e-11,33;CL:0000047,3.50e-11,33;CL:0000031,3.50e-11,33;CL:0000404,3.50e-11,33;CL:0000221,2.52e-10,44;CL:0000133,2.52e-10,44;CL:0002319,2.54e-10,43;CL:0000393,2.87e-07,39;CL:0000211,2.87e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.79e-30!73;UBERON:0005743!6.79e-30!73;UBERON:0000073!2.29e-28!75;UBERON:0001016!2.29e-28!75;UBERON:0002346!4.29e-28!71;UBERON:0003075!4.29e-28!71;UBERON:0007284!4.29e-28!71;UBERON:0000033!1.98e-27!63;UBERON:0001049!3.92e-26!52;UBERON:0005068!3.92e-26!52;UBERON:0006241!3.92e-26!52;UBERON:0007135!3.92e-26!52;UBERON:0004121!1.45e-25!102;UBERON:0000924!1.45e-25!102;UBERON:0006601!1.45e-25!102;UBERON:0000955!8.26e-25!50;UBERON:0006238!8.26e-25!50;UBERON:0002616!4.29e-24!49;UBERON:0003056!3.90e-23!49;UBERON:0000153!1.93e-22!94;UBERON:0007811!3.25e-22!86;UBERON:0003080!1.62e-19!40;UBERON:0002780!6.72e-19!39;UBERON:0001890!6.72e-19!39;UBERON:0006240!6.72e-19!39;UBERON:0002020!8.74e-18!34;UBERON:0002791!8.51e-15!29;UBERON:0003528!8.51e-15!29;UBERON:0001893!8.51e-15!29;UBERON:0000956!1.35e-10!21;UBERON:0001869!1.35e-10!21;UBERON:0000203!1.35e-10!21;UBERON:0002619!7.31e-09!17;UBERON:0000468!1.03e-08!333;UBERON:0002021!1.16e-07!10;UBERON:0000411!1.16e-07!10;UBERON:0001950!1.16e-07!10;UBERON:0003076!3.85e-07!12;UBERON:0003057!3.85e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.75e-31,73;UBERON:0002346,6.87e-31,64;UBERON:0003075,6.87e-31,64;UBERON:0007284,6.87e-31,64;UBERON:0000073,2.86e-29,54;UBERON:0001016,3.86e-29,75;UBERON:0001049,6.06e-28,52;UBERON:0005068,6.06e-28,52;UBERON:0006241,6.06e-28,52;UBERON:0007135,6.06e-28,52;UBERON:0004121,1.78e-25,95;UBERON:0000924,1.78e-25,95;UBERON:0006601,1.78e-25,95;UBERON:0003056,1.00e-24,49;UBERON:0000955,1.12e-24,47;UBERON:0006238,1.12e-24,47;UBERON:0010371,1.28e-24,73;UBERON:0010314,1.70e-24,92;UBERON:0002616,6.37e-24,46;UBERON:0003080,7.77e-21,40;UBERON:0002780,3.57e-20,39;UBERON:0001890,3.57e-20,39;UBERON:0006240,3.57e-20,39;UBERON:0002020,5.61e-19,34;UBERON:0003528,9.08e-16,29;UBERON:0002791,9.08e-16,29;UBERON:0001893,9.08e-16,29;UBERON:0000956,2.93e-11,21;UBERON:0001869,2.93e-11,21;UBERON:0000203,2.93e-11,21;UBERON:0002619,2.12e-09,17;UBERON:0002021,4.12e-08,10;UBERON:0000411,4.12e-08,10;UBERON:0001950,4.12e-08,10;UBERON:0003076,1.49e-07,12;UBERON:0003057,1.49e-07,12 | |||
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| |||
|short_description=p1@Gpr162 | |||
}} |
Revision as of 08:51, 14 September 2013
Short description: | p1@Gpr162 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gpr162_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000046893, NM_013533, uc009dsg.1, uc009dsh.1_5end |
EntrezGene: | Gpr162 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.40e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.40e-13 | 23 |
neuron | 3.50e-11 | 33 |
neuronal stem cell | 3.50e-11 | 33 |
neuroblast | 3.50e-11 | 33 |
electrically signaling cell | 3.50e-11 | 33 |
ectodermal cell | 2.52e-10 | 44 |
neurectodermal cell | 2.52e-10 | 44 |
neural cell | 2.54e-10 | 43 |
electrically responsive cell | 2.87e-07 | 39 |
electrically active cell | 2.87e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.