FFCP PHASE1:Mm9::chr6:144157893..144157905,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20678|HGNC=|MCL_coexpression_id=76|UniProt=Q2TBA9|association_with_transcript=66bp_to_ENSMUST00000077160_5end|description=CAGE_peak_14_at_Sox5_5end|id=chr6:144157893..144157905,-|ontology_enrichment_celltype=CL:0002609!2.90e-07!6|ontology_enrichment_celltype_v019_2=CL:0002609,1.58e-25,6;CL:0000182,3.19e-11,5;CL:0002608,7.10e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003080!4.82e-09!40;UBERON:0001017!5.98e-09!73;UBERON:0005743!5.98e-09!73;UBERON:0001049!7.63e-09!52;UBERON:0005068!7.63e-09!52;UBERON:0006241!7.63e-09!52;UBERON:0007135!7.63e-09!52;UBERON:0000073!7.77e-09!75;UBERON:0001016!7.77e-09!75;UBERON:0002780!1.90e-08!39;UBERON:0001890!1.90e-08!39;UBERON:0006240!1.90e-08!39;UBERON:0000955!3.30e-08!50;UBERON:0006238!3.30e-08!50;UBERON:0002346!3.49e-08!71;UBERON:0003075!3.49e-08!71;UBERON:0007284!3.49e-08!71;UBERON:0002616!8.18e-08!49;UBERON:0002791!1.63e-07!29;UBERON:0003528!1.63e-07!29;UBERON:0001893!1.63e-07!29;UBERON:0002020!5.68e-07!34;UBERON:0003056!6.31e-07!49;UBERON:0000033!8.45e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0000956,4.05e-10,21;UBERON:0001869,4.05e-10,21;UBERON:0000203,4.05e-10,21;UBERON:0003528,3.24e-07,29;UBERON:0002791,3.24e-07,29;UBERON:0001893,3.24e-07,29|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.43575472007147,9.18040380655497,9.04397333810943,0,0,1.10241719293459,1.91690942036473,0.919218786610021,0,0,0,0.263772575460388,0.365950574409639,0.52091337055676,0,0.56276261003168,0,0.294628585473668,0.284743361598206,0,0.075726193333184,0,0,0.860423876981386,0,1.07940638327563,1.29955283489534,1.34408066129201,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.599162557619291,0,0.251308704225729,0.347648640384553,0,0,0.648965052271031,0,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0,0.215567992932842,1.13463648100692,0.351902248327898,0,0.556094498451196,0.348252166522167,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0.514523061896422,0,0.264450566663544,0.213288250535234,0,0,0,0,0,0,0,0,0,0.38992817423824,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,1.77871576252289,0,0,0,0,0,0,0,0,0,0,0,0,1.01031551178845,0.717589654087649,0.964887042726734,0,0,0.162964976442026,0.169745085775188,0,0.335012514883631,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,0,0.35163505977661,0,0,1.26203287766503,0.390438744296638,0.430846795465598,0.477937595905104,0,0,0.404810701674894,0.584511715822624,0,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0,0,0.177340233642274,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0.406638934253697,0,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0.920650473014354,1.14579102687879,0.171853182343688,0.685082519770642,0.755393897389701,0.675022500231806,0,0,0,0.207574695168353,0.399024873401031,1.02440163452481,0.972426868273176,0.209613162627982,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,1.01391719956096,0.377252682772152,0.37456602987953,0.448176066834085,0.402048282689293,0,0.463537303779422,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0.726732083161643,0.376437521661322,0.0846146078916765,0.914639864363863,0,0.135804113845862,0,0,0.0985044823755635,0,0.464810523557898,0,0.749431733813838,0.233931608445408,0,0.382576664137687,0.441182838239031,0|short_description=p14@Sox5}} | ||
|EntrezGene=20678 | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|UniProt=Q2TBA9 | |||
|association_with_transcript=66bp_to_ENSMUST00000077160_5end | |||
|description=CAGE_peak_14_at_Sox5_5end | |||
|id=chr6:144157893..144157905,- | |||
|ontology_enrichment_celltype=CL:0002609!2.90e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.58e-25,6;CL:0000182,3.19e-11,5;CL:0002608,7.10e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003080!4.82e-09!40;UBERON:0001017!5.98e-09!73;UBERON:0005743!5.98e-09!73;UBERON:0001049!7.63e-09!52;UBERON:0005068!7.63e-09!52;UBERON:0006241!7.63e-09!52;UBERON:0007135!7.63e-09!52;UBERON:0000073!7.77e-09!75;UBERON:0001016!7.77e-09!75;UBERON:0002780!1.90e-08!39;UBERON:0001890!1.90e-08!39;UBERON:0006240!1.90e-08!39;UBERON:0000955!3.30e-08!50;UBERON:0006238!3.30e-08!50;UBERON:0002346!3.49e-08!71;UBERON:0003075!3.49e-08!71;UBERON:0007284!3.49e-08!71;UBERON:0002616!8.18e-08!49;UBERON:0002791!1.63e-07!29;UBERON:0003528!1.63e-07!29;UBERON:0001893!1.63e-07!29;UBERON:0002020!5.68e-07!34;UBERON:0003056!6.31e-07!49;UBERON:0000033!8.45e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,4.05e-10,21;UBERON:0001869,4.05e-10,21;UBERON:0000203,4.05e-10,21;UBERON:0003528,3.24e-07,29;UBERON:0002791,3.24e-07,29;UBERON:0001893,3.24e-07,29 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.43575472007147,9.18040380655497,9.04397333810943,0,0,1.10241719293459,1.91690942036473,0.919218786610021,0,0,0,0.263772575460388,0.365950574409639,0.52091337055676,0,0.56276261003168,0,0.294628585473668,0.284743361598206,0,0.075726193333184,0,0,0.860423876981386,0,1.07940638327563,1.29955283489534,1.34408066129201,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.599162557619291,0,0.251308704225729,0.347648640384553,0,0,0.648965052271031,0,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0,0.215567992932842,1.13463648100692,0.351902248327898,0,0.556094498451196,0.348252166522167,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0.514523061896422,0,0.264450566663544,0.213288250535234,0,0,0,0,0,0,0,0,0,0.38992817423824,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,1.77871576252289,0,0,0,0,0,0,0,0,0,0,0,0,1.01031551178845,0.717589654087649,0.964887042726734,0,0,0.162964976442026,0.169745085775188,0,0.335012514883631,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,0,0.35163505977661,0,0,1.26203287766503,0.390438744296638,0.430846795465598,0.477937595905104,0,0,0.404810701674894,0.584511715822624,0,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0,0,0.177340233642274,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0.406638934253697,0,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0.920650473014354,1.14579102687879,0.171853182343688,0.685082519770642,0.755393897389701,0.675022500231806,0,0,0,0.207574695168353,0.399024873401031,1.02440163452481,0.972426868273176,0.209613162627982,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,1.01391719956096,0.377252682772152,0.37456602987953,0.448176066834085,0.402048282689293,0,0.463537303779422,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0.726732083161643,0.376437521661322,0.0846146078916765,0.914639864363863,0,0.135804113845862,0,0,0.0985044823755635,0,0.464810523557898,0,0.749431733813838,0.233931608445408,0,0.382576664137687,0.441182838239031,0 | |||
|short_description=p14@Sox5 | |||
}} |
Revision as of 09:19, 14 September 2013
Short description: | p14@Sox5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Sox5_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | 66bp_to_ENSMUST00000077160_5end |
EntrezGene: | Sox5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.58e-25 | 6 |
hepatocyte | 3.19e-11 | 5 |
hippocampal neuron | 7.10e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 4.05e-10 | 21 |
cerebral hemisphere | 4.05e-10 | 21 |
pallium | 4.05e-10 | 21 |
brain grey matter | 3.24e-07 | 29 |
regional part of telencephalon | 3.24e-07 | 29 |
telencephalon | 3.24e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.