FFCP PHASE1:Hg19::chr9:80263772..80263785,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:80263772..80263785,-|id=chr9:80263772..80263785,-|ontology_enrichment_celltype=CL:0002322!8.82e-10!5|ontology_enrichment_celltype_v019=CL:0000511;9.72e-14;1!CL:0002625;9.72e-14;1!CL:0000216;9.72e-14;1!CL:0002322;5.03e-11;5!CL:0000540;3.27e-09;6!CL:0000404;3.27e-09;6!CL:0002262;1.64e-07;2!CL:1000398;1.64e-07;2|ontology_enrichment_celltype_v019_2=CL:0000511,5.15e-14,1;CL:0002625,5.15e-14,1;CL:0000216,5.15e-14,1;CL:0002322,4.79e-11,5;CL:0000540,3.02e-09,6;CL:0000031,3.02e-09,6;CL:0000404,3.02e-09,6;CL:0002262,1.45e-07,2;CL:1000398,1.45e-07,2;CL:0000047,3.78e-07,8|ontology_enrichment_development_v019=CL:0000031;3.27e-09;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;3.28e-14;1!DOID:4549;3.28e-14;1!DOID:5861;3.28e-14;1!DOID:6496;3.28e-14;1|ontology_enrichment_disease_v019_2=DOID:3371,3.50e-14,1;DOID:4549,3.50e-14,1;DOID:5861,3.50e-14,1;DOID:6496,3.50e-14,1|ontology_enrichment_uberon=UBERON:0007023!6.42e-14!115;UBERON:0005743!7.32e-10!86;UBERON:0001017!8.70e-10!82;UBERON:0001049!3.47e-09!57;UBERON:0005068!3.47e-09!57;UBERON:0006241!3.47e-09!57;UBERON:0007135!3.47e-09!57;UBERON:0000073!3.11e-08!94;UBERON:0001016!3.11e-08!94;UBERON:0002780!3.13e-08!41;UBERON:0001890!3.13e-08!41;UBERON:0006240!3.13e-08!41;UBERON:0001893!5.49e-08!34;UBERON:0003080!6.12e-08!42;UBERON:0002616!1.00e-07!59;UBERON:0002346!1.15e-07!90;UBERON:0001869!1.28e-07!32;UBERON:0003135!1.65e-07!11;UBERON:0002791!2.73e-07!33;UBERON:0000955!4.49e-07!69;UBERON:0006238!4.49e-07!69|ontology_enrichment_uberon_v019=UBERON:0002050;7.35e-23;5!UBERON:0005423;7.35e-23;5!UBERON:0005795;9.72e-14;1!UBERON:0006834;9.72e-14;1!UBERON:0001136;9.72e-14;1!UBERON:0001343;9.72e-14;1!UBERON:0004910;9.72e-14;1!UBERON:0004813;9.72e-14;1!UBERON:0002346;2.35e-13;4!UBERON:0000923;2.35e-13;4!UBERON:0010316;2.35e-13;4!UBERON:0005291;2.35e-13;4!UBERON:0001875;1.64e-07;2!UBERON:0001281;1.64e-07;2!UBERON:0003497;1.64e-07;2!UBERON:0003909;1.64e-07;2!UBERON:0003835;1.64e-07;2!UBERON:0004909;1.64e-07;2!UBERON:0006514;1.64e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001136,5.15e-14,1;UBERON:0001343,5.15e-14,1;UBERON:0004910,5.15e-14,1;UBERON:0005154,5.15e-14,1;UBERON:0005295,5.15e-14,1;UBERON:0004813,5.15e-14,1;UBERON:0005297,5.15e-14,1;UBERON:0005294,5.15e-14,1;UBERON:0010141,5.15e-14,1;UBERON:0005891,5.15e-14,1;UBERON:0006834,5.85e-14,1;UBERON:0004909,1.20e-07,2;UBERON:0001281,1.45e-07,2;UBERON:0003497,1.45e-07,2;UBERON:0003909,1.45e-07,2;UBERON:0003835,1.45e-07,2;UBERON:0001875,2.12e-07,2;UBERON:0006514,2.12e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.731842236777572,0.132529768321485,0.580969714347592,1.45125477021519,2.01856680700503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0.721832238805369,0,0.570762456703795,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,1.13733384070897,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,3.61850119435151,0,0,0,0.126621591911757,0,0,0.426905989478705,0,0.144090417154106,0,0,0,0,0,0,0,0,0,1.20084057741958,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.964518890790115,1.51293380256957,1.24632101408756,0,0,0.182248669974074,0,0,0.786818822024972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0.471612915298998,0.828478110694391,0,0,0,0,0,0.5013797880454,0,0.655745261419609,0,0,0.366078794705889,0,0,0.221858103073705,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06287460050841,0,0,0,0,0,0,0,0.128458450192919,1.41696576325585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.19024743058172,0,0,0.496211178389294,1.23109871051734,0,0,0,0,0.455324382702595,0.0887023701626388,0,0,0.271878931907327,0,0,0.667388411352415,0.156986185701028,0.157115589916002,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.154348316215889,0,3.76253837089218,0,0,0.392616934229891,0,0,0,0.0939839179798536,0.644578879735772,0,0,0,0,0,0,0,0,0.271965960763659,0.436350690340377,0.5290268405154,0,0,0.865253124247578,0,0,0,0.305966489225945,0,0.735159196278759,0.250707539292375,0,0,0.829169439458779,0,0,0,0,0,0,0.381882949668989,0.606351566874658,0,0.342233301085281,0,0.286888821570705,0.332660356546013,0,0,0,0,0,1.58913877437726,1.22068853494722,0,0,0|short_description=p@chr9:80263772..80263785,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:80263772..80263785,- | |||
|id=chr9:80263772..80263785,- | |||
|ontology_enrichment_celltype=CL:0002322!8.82e-10!5 | |||
|ontology_enrichment_celltype_v019=CL:0000511;9.72e-14;1!CL:0002625;9.72e-14;1!CL:0000216;9.72e-14;1!CL:0002322;5.03e-11;5!CL:0000540;3.27e-09;6!CL:0000404;3.27e-09;6!CL:0002262;1.64e-07;2!CL:1000398;1.64e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,5.15e-14,1;CL:0002625,5.15e-14,1;CL:0000216,5.15e-14,1;CL:0002322,4.79e-11,5;CL:0000540,3.02e-09,6;CL:0000031,3.02e-09,6;CL:0000404,3.02e-09,6;CL:0002262,1.45e-07,2;CL:1000398,1.45e-07,2;CL:0000047,3.78e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;3.27e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;3.28e-14;1!DOID:4549;3.28e-14;1!DOID:5861;3.28e-14;1!DOID:6496;3.28e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,3.50e-14,1;DOID:4549,3.50e-14,1;DOID:5861,3.50e-14,1;DOID:6496,3.50e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.42e-14!115;UBERON:0005743!7.32e-10!86;UBERON:0001017!8.70e-10!82;UBERON:0001049!3.47e-09!57;UBERON:0005068!3.47e-09!57;UBERON:0006241!3.47e-09!57;UBERON:0007135!3.47e-09!57;UBERON:0000073!3.11e-08!94;UBERON:0001016!3.11e-08!94;UBERON:0002780!3.13e-08!41;UBERON:0001890!3.13e-08!41;UBERON:0006240!3.13e-08!41;UBERON:0001893!5.49e-08!34;UBERON:0003080!6.12e-08!42;UBERON:0002616!1.00e-07!59;UBERON:0002346!1.15e-07!90;UBERON:0001869!1.28e-07!32;UBERON:0003135!1.65e-07!11;UBERON:0002791!2.73e-07!33;UBERON:0000955!4.49e-07!69;UBERON:0006238!4.49e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002050;7.35e-23;5!UBERON:0005423;7.35e-23;5!UBERON:0005795;9.72e-14;1!UBERON:0006834;9.72e-14;1!UBERON:0001136;9.72e-14;1!UBERON:0001343;9.72e-14;1!UBERON:0004910;9.72e-14;1!UBERON:0004813;9.72e-14;1!UBERON:0002346;2.35e-13;4!UBERON:0000923;2.35e-13;4!UBERON:0010316;2.35e-13;4!UBERON:0005291;2.35e-13;4!UBERON:0001875;1.64e-07;2!UBERON:0001281;1.64e-07;2!UBERON:0003497;1.64e-07;2!UBERON:0003909;1.64e-07;2!UBERON:0003835;1.64e-07;2!UBERON:0004909;1.64e-07;2!UBERON:0006514;1.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,5.15e-14,1;UBERON:0001343,5.15e-14,1;UBERON:0004910,5.15e-14,1;UBERON:0005154,5.15e-14,1;UBERON:0005295,5.15e-14,1;UBERON:0004813,5.15e-14,1;UBERON:0005297,5.15e-14,1;UBERON:0005294,5.15e-14,1;UBERON:0010141,5.15e-14,1;UBERON:0005891,5.15e-14,1;UBERON:0006834,5.85e-14,1;UBERON:0004909,1.20e-07,2;UBERON:0001281,1.45e-07,2;UBERON:0003497,1.45e-07,2;UBERON:0003909,1.45e-07,2;UBERON:0003835,1.45e-07,2;UBERON:0001875,2.12e-07,2;UBERON:0006514,2.12e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.731842236777572,0.132529768321485,0.580969714347592,1.45125477021519,2.01856680700503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0.721832238805369,0,0.570762456703795,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,1.13733384070897,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,3.61850119435151,0,0,0,0.126621591911757,0,0,0.426905989478705,0,0.144090417154106,0,0,0,0,0,0,0,0,0,1.20084057741958,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.964518890790115,1.51293380256957,1.24632101408756,0,0,0.182248669974074,0,0,0.786818822024972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0.471612915298998,0.828478110694391,0,0,0,0,0,0.5013797880454,0,0.655745261419609,0,0,0.366078794705889,0,0,0.221858103073705,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06287460050841,0,0,0,0,0,0,0,0.128458450192919,1.41696576325585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.19024743058172,0,0,0.496211178389294,1.23109871051734,0,0,0,0,0.455324382702595,0.0887023701626388,0,0,0.271878931907327,0,0,0.667388411352415,0.156986185701028,0.157115589916002,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.154348316215889,0,3.76253837089218,0,0,0.392616934229891,0,0,0,0.0939839179798536,0.644578879735772,0,0,0,0,0,0,0,0,0.271965960763659,0.436350690340377,0.5290268405154,0,0,0.865253124247578,0,0,0,0.305966489225945,0,0.735159196278759,0.250707539292375,0,0,0.829169439458779,0,0,0,0,0,0,0.381882949668989,0.606351566874658,0,0.342233301085281,0,0.286888821570705,0.332660356546013,0,0,0,0,0,1.58913877437726,1.22068853494722,0,0,0 | |||
|short_description=p@chr9:80263772..80263785,- | |||
}} |
Revision as of 09:28, 14 September 2013
Short description: | p@chr9:80263772..80263785, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:80263772..80263785, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 5.15e-14 | 1 |
seminiferous tubule epithelial cell | 5.15e-14 | 1 |
Sertoli cell | 5.15e-14 | 1 |
embryonic stem cell | 4.79e-11 | 5 |
neuron | 3.02e-09 | 6 |
neuroblast | 3.02e-09 | 6 |
electrically signaling cell | 3.02e-09 | 6 |
endothelial cell of sinusoid | 1.45e-07 | 2 |
endothelial cell of hepatic sinusoid | 1.45e-07 | 2 |
neuronal stem cell | 3.78e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 5.15e-14 | 1 |
seminiferous tubule of testis | 5.15e-14 | 1 |
epithelium of male gonad | 5.15e-14 | 1 |
epithelial cord | 5.15e-14 | 1 |
sex cord | 5.15e-14 | 1 |
seminiferous tubule epithelium | 5.15e-14 | 1 |
testis sex cord | 5.15e-14 | 1 |
genital ridge | 5.15e-14 | 1 |
primitive sex cord of indifferent gonad | 5.15e-14 | 1 |
coelomic epithelium | 5.15e-14 | 1 |
uterus or analog | 5.85e-14 | 1 |
epithelium of gonad | 1.20e-07 | 2 |
hepatic sinusoid | 1.45e-07 | 2 |
abdomen blood vessel | 1.45e-07 | 2 |
sinusoid | 1.45e-07 | 2 |
abdominal segment blood vessel | 1.45e-07 | 2 |
globus pallidus | 2.12e-07 | 2 |
pallidum | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 3.50e-14 | 1 |
extraosseous chondrosarcoma | 3.50e-14 | 1 |
myxoid chondrosarcoma | 3.50e-14 | 1 |
extraskeletal myxoid chondrosarcoma | 3.50e-14 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.