FFCP PHASE1:Mm9::chr6:3437479..3437484,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:3437479..3437484,-|id=chr6:3437479..3437484,-|ontology_enrichment_celltype=CL:0000473!3.07e-12!3;CL:0000627!3.07e-12!3;CL:0000682!3.07e-12!3;CL:0000239!4.33e-10!6;CL:0000677!4.33e-10!6;CL:0000212!4.33e-10!6;CL:0000584!4.33e-10!6;CL:0000075!1.18e-08!7;CL:0002563!9.85e-07!9;CL:0002251!9.85e-07!9|ontology_enrichment_celltype_v019_2=CL:0000682,7.35e-53,3;CL:0000473,2.90e-23,7;CL:0000066,5.10e-18,25;CL:0000239,1.61e-12,6;CL:0000677,1.61e-12,6;CL:0000584,1.61e-12,6;CL:0000075,7.02e-11,7;CL:0002563,1.10e-08,9;CL:0002251,1.10e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.86e-18!15;UBERON:0001242!8.21e-13!13;UBERON:0000060!8.21e-13!13;UBERON:0001262!8.21e-13!13;UBERON:0004786!8.21e-13!13;UBERON:0002465!2.57e-11!3;UBERON:0004923!1.03e-10!24;UBERON:0001962!4.70e-08!2;UBERON:0001961!4.70e-08!2;UBERON:0001744!4.70e-08!2;UBERON:0007023!1.40e-07!51;UBERON:0003350!9.85e-07!9;UBERON:0004808!9.85e-07!9;UBERON:0001277!9.85e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.10e-08,9;UBERON:0004808,1.10e-08,9;UBERON:0001277,1.10e-08,9;UBERON:0000485,2.79e-07,11|phase1_expression=0,0.348975407639361,1.36499771816861,0,0,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0.47997726838022,0.45881856213434,1.14846392823004,1.7230479846363,3.44753972297422,0.190023419456374,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:3437479..3437484,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:3437479..3437484,- | |||
|id=chr6:3437479..3437484,- | |||
|ontology_enrichment_celltype=CL:0000473!3.07e-12!3;CL:0000627!3.07e-12!3;CL:0000682!3.07e-12!3;CL:0000239!4.33e-10!6;CL:0000677!4.33e-10!6;CL:0000212!4.33e-10!6;CL:0000584!4.33e-10!6;CL:0000075!1.18e-08!7;CL:0002563!9.85e-07!9;CL:0002251!9.85e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,7.35e-53,3;CL:0000473,2.90e-23,7;CL:0000066,5.10e-18,25;CL:0000239,1.61e-12,6;CL:0000677,1.61e-12,6;CL:0000584,1.61e-12,6;CL:0000075,7.02e-11,7;CL:0002563,1.10e-08,9;CL:0002251,1.10e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.86e-18!15;UBERON:0001242!8.21e-13!13;UBERON:0000060!8.21e-13!13;UBERON:0001262!8.21e-13!13;UBERON:0004786!8.21e-13!13;UBERON:0002465!2.57e-11!3;UBERON:0004923!1.03e-10!24;UBERON:0001962!4.70e-08!2;UBERON:0001961!4.70e-08!2;UBERON:0001744!4.70e-08!2;UBERON:0007023!1.40e-07!51;UBERON:0003350!9.85e-07!9;UBERON:0004808!9.85e-07!9;UBERON:0001277!9.85e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.10e-08,9;UBERON:0004808,1.10e-08,9;UBERON:0001277,1.10e-08,9;UBERON:0000485,2.79e-07,11 | |||
|phase1_expression=0,0.348975407639361,1.36499771816861,0,0,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0.47997726838022,0.45881856213434,1.14846392823004,1.7230479846363,3.44753972297422,0.190023419456374,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:3437479..3437484,- | |||
}} |
Revision as of 09:40, 14 September 2013
Short description: | p@chr6:3437479..3437484, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:3437479..3437484, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 7.35e-53 | 3 |
defensive cell | 2.90e-23 | 7 |
epithelial cell | 5.10e-18 | 25 |
brush border epithelial cell | 1.61e-12 | 6 |
gut absorptive cell | 1.61e-12 | 6 |
enterocyte | 1.61e-12 | 6 |
columnar/cuboidal epithelial cell | 7.02e-11 | 7 |
intestinal epithelial cell | 1.10e-08 | 9 |
epithelial cell of alimentary canal | 1.10e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.10e-08 | 9 |
gastrointestinal system epithelium | 1.10e-08 | 9 |
intestinal epithelium | 1.10e-08 | 9 |
simple columnar epithelium | 2.79e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.