FFCP PHASE1:Hg19::chrX:123097014..123097033,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10735|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11355|TSSclassifier=W|UniProt=B1AMT0|association_with_transcript=0bp_to_ENST00000394478_5end|coexpression_cluster_id=C2|description=CAGE_peak_12_at_STAG2_5end|id=chrX:123097014..123097033,+|ontology_enrichment_celltype=CL:0002057!4.79e-40!42;CL:0000766!2.85e-38!76;CL:0000860!4.97e-38!45;CL:0000738!1.80e-37!140;CL:0000037!1.77e-32!172;CL:0000566!1.77e-32!172;CL:0000988!1.77e-30!182;CL:0000839!2.41e-30!70;CL:0002032!9.85e-30!165;CL:0000837!9.85e-30!165;CL:0000557!1.35e-29!71;CL:0002009!1.79e-29!65;CL:0002194!2.52e-29!63;CL:0000576!2.52e-29!63;CL:0000040!2.52e-29!63;CL:0000559!2.52e-29!63;CL:0000763!3.71e-29!112;CL:0000049!3.71e-29!112;CL:0002031!1.50e-28!124;CL:0002087!2.08e-28!119;CL:0002393!1.01e-10!9;CL:0002397!1.01e-10!9;CL:0000094!2.31e-10!8;CL:0000081!7.17e-07!11|ontology_enrichment_celltype_v019=CL:0000860;5.05e-55;33!CL:0002057;5.05e-55;33!CL:0000576;9.56e-42;48!CL:0000473;3.68e-39;39!CL:0000234;3.68e-39;39!CL:0000766;1.09e-30;69!CL:0000094;5.96e-26;8!CL:0002393;2.78e-23;6!CL:0002397;2.78e-23;6!CL:0000081;1.34e-18;11!CL:0000763;4.76e-15;100!CL:0000775;2.24e-14;3!CL:0002087;5.88e-11;104!CL:0000771;4.00e-10;2!CL:0000738;4.05e-08;136!CL:0000988;5.76e-07;177|ontology_enrichment_celltype_v019_2=CL:0000860,4.05e-81,42;CL:0002057,4.05e-81,42;CL:0000473,4.42e-70,48;CL:0000234,4.42e-70,48;CL:0000766,5.82e-70,72;CL:0002194,1.26e-54,59;CL:0000576,1.26e-54,59;CL:0000040,1.26e-54,59;CL:0000559,1.26e-54,59;CL:0002009,1.24e-52,61;CL:0000839,1.23e-51,66;CL:0000557,2.36e-47,67;CL:0000763,9.25e-47,108;CL:0000049,9.25e-47,108;CL:0000738,1.88e-35,136;CL:0000037,1.30e-30,168;CL:0002032,1.78e-30,161;CL:0000837,1.78e-30,161;CL:0000988,1.27e-28,177;CL:0002031,3.30e-27,120;CL:0002087,1.05e-26,115;CL:0000094,5.07e-26,8;CL:0002393,6.09e-21,9;CL:0002397,6.09e-21,9;CL:0000081,1.19e-18,11;CL:0000775,2.20e-14,3;CL:0000771,4.00e-10,2;CL:0000134,5.53e-10,354;CL:0002320,1.27e-09,361;CL:0000219,2.37e-08,386;CL:0000034,6.33e-07,441;CL:0000048,8.32e-07,427|ontology_enrichment_development_v019=CL:0002057;6.43e-57;42!CL:0000049;1.25e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!6.09e-36!102;UBERON:0003061!6.09e-36!102;UBERON:0002193!2.15e-31!112;UBERON:0002371!1.53e-25!80;UBERON:0001474!1.29e-23!86;UBERON:0004765!1.34e-20!101;UBERON:0001434!1.34e-20!101;UBERON:0002405!6.87e-16!115;UBERON:0000178!3.73e-11!15;UBERON:0000179!3.73e-11!15;UBERON:0000463!3.73e-11!15;UBERON:0002204!1.87e-07!167;UBERON:0003081!6.47e-07!216|ontology_enrichment_uberon_v019=UBERON:0000178;3.73e-17;15!UBERON:0000179;3.73e-17;15!UBERON:0000463;3.73e-17;15!UBERON:0002390;1.17e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.87e-55,98;UBERON:0003061,2.87e-55,98;UBERON:0002193,2.07e-49,108;UBERON:0002371,6.23e-44,76;UBERON:0001474,3.18e-40,82;UBERON:0004765,4.86e-36,90;UBERON:0002405,1.18e-34,93;UBERON:0001434,9.60e-32,100;UBERON:0003081,2.20e-22,203;UBERON:0000178,4.08e-17,15;UBERON:0000179,4.08e-17,15;UBERON:0000463,4.08e-17,15;UBERON:0002204,3.49e-16,167;UBERON:0000926,2.14e-11,315;UBERON:0004120,2.14e-11,315;UBERON:0006603,2.14e-11,315;UBERON:0002384,3.95e-09,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0,1.18009283054671,1.91914699048606,0.309632246632152,0,0,0,0,0,1.17440175733939,1.66198622559563,2.20598892217156,1.73608696572681,0,0,0.515151135268373,0.581592955118259,0.755751887377619,0.727752183563449,1.39457422143411,0.822335776043652,1.23882548358041,2.01384674625505,1.2808035326455,3.54723344832878,3.7922024881028,1.29096936716765,4.06279459783025,0.188242339542605,0,1.12361742222542,3.97909060082173,0.641858054152187,4.47535988059329,0,0.398927315243264,0.426224750532694,2.32167390902867,1.13477044938228,5.60540024096017,2.51248665256743,1.5644487552606,2.82345498116652,3.02699751316684,4.41933163185078,8.54448446090388,1.69004229049553,1.06302149982522,1.88692780957538,1.57260083605093,2.4028302854641,2.4108838004562,0.855038231223746,0.59675003159727,1.64397738388171,0,0,0,1.28019066769952,0.800791974072025,0.574752439954483,0.661044872784862,0,0.569212969109448,0.587237189370939,0.382273228125229,1.32171328579026,0.560508562981536,0,0,0,0,0.167186495390678,0,0.473447805734733,0,0,0,0.664601683750863,0.541607727530031,0,0.260118695119756,0,0,0,0.296573126324121,0.267540828089713,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.752875595388864,0.383959833463255,0,0,0.821127996921047,0,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0.7299547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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10735 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11355 | |||
|TSSclassifier=W | |||
|UniProt=B1AMT0 | |||
|association_with_transcript=0bp_to_ENST00000394478_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_12_at_STAG2_5end | |||
|id=chrX:123097014..123097033,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.79e-40!42;CL:0000766!2.85e-38!76;CL:0000860!4.97e-38!45;CL:0000738!1.80e-37!140;CL:0000037!1.77e-32!172;CL:0000566!1.77e-32!172;CL:0000988!1.77e-30!182;CL:0000839!2.41e-30!70;CL:0002032!9.85e-30!165;CL:0000837!9.85e-30!165;CL:0000557!1.35e-29!71;CL:0002009!1.79e-29!65;CL:0002194!2.52e-29!63;CL:0000576!2.52e-29!63;CL:0000040!2.52e-29!63;CL:0000559!2.52e-29!63;CL:0000763!3.71e-29!112;CL:0000049!3.71e-29!112;CL:0002031!1.50e-28!124;CL:0002087!2.08e-28!119;CL:0002393!1.01e-10!9;CL:0002397!1.01e-10!9;CL:0000094!2.31e-10!8;CL:0000081!7.17e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.05e-55;33!CL:0002057;5.05e-55;33!CL:0000576;9.56e-42;48!CL:0000473;3.68e-39;39!CL:0000234;3.68e-39;39!CL:0000766;1.09e-30;69!CL:0000094;5.96e-26;8!CL:0002393;2.78e-23;6!CL:0002397;2.78e-23;6!CL:0000081;1.34e-18;11!CL:0000763;4.76e-15;100!CL:0000775;2.24e-14;3!CL:0002087;5.88e-11;104!CL:0000771;4.00e-10;2!CL:0000738;4.05e-08;136!CL:0000988;5.76e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.05e-81,42;CL:0002057,4.05e-81,42;CL:0000473,4.42e-70,48;CL:0000234,4.42e-70,48;CL:0000766,5.82e-70,72;CL:0002194,1.26e-54,59;CL:0000576,1.26e-54,59;CL:0000040,1.26e-54,59;CL:0000559,1.26e-54,59;CL:0002009,1.24e-52,61;CL:0000839,1.23e-51,66;CL:0000557,2.36e-47,67;CL:0000763,9.25e-47,108;CL:0000049,9.25e-47,108;CL:0000738,1.88e-35,136;CL:0000037,1.30e-30,168;CL:0002032,1.78e-30,161;CL:0000837,1.78e-30,161;CL:0000988,1.27e-28,177;CL:0002031,3.30e-27,120;CL:0002087,1.05e-26,115;CL:0000094,5.07e-26,8;CL:0002393,6.09e-21,9;CL:0002397,6.09e-21,9;CL:0000081,1.19e-18,11;CL:0000775,2.20e-14,3;CL:0000771,4.00e-10,2;CL:0000134,5.53e-10,354;CL:0002320,1.27e-09,361;CL:0000219,2.37e-08,386;CL:0000034,6.33e-07,441;CL:0000048,8.32e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;6.43e-57;42!CL:0000049;1.25e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.09e-36!102;UBERON:0003061!6.09e-36!102;UBERON:0002193!2.15e-31!112;UBERON:0002371!1.53e-25!80;UBERON:0001474!1.29e-23!86;UBERON:0004765!1.34e-20!101;UBERON:0001434!1.34e-20!101;UBERON:0002405!6.87e-16!115;UBERON:0000178!3.73e-11!15;UBERON:0000179!3.73e-11!15;UBERON:0000463!3.73e-11!15;UBERON:0002204!1.87e-07!167;UBERON:0003081!6.47e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.73e-17;15!UBERON:0000179;3.73e-17;15!UBERON:0000463;3.73e-17;15!UBERON:0002390;1.17e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.87e-55,98;UBERON:0003061,2.87e-55,98;UBERON:0002193,2.07e-49,108;UBERON:0002371,6.23e-44,76;UBERON:0001474,3.18e-40,82;UBERON:0004765,4.86e-36,90;UBERON:0002405,1.18e-34,93;UBERON:0001434,9.60e-32,100;UBERON:0003081,2.20e-22,203;UBERON:0000178,4.08e-17,15;UBERON:0000179,4.08e-17,15;UBERON:0000463,4.08e-17,15;UBERON:0002204,3.49e-16,167;UBERON:0000926,2.14e-11,315;UBERON:0004120,2.14e-11,315;UBERON:0006603,2.14e-11,315;UBERON:0002384,3.95e-09,371 | |||
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| |||
|short_description=p12@STAG2 | |||
}} |
Revision as of 10:38, 14 September 2013
Short description: | p12@STAG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_STAG2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000394478_5end |
EntrezGene: | STAG2 |
HGNC: | 11355 |
UniProt: | B1AMT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.87e-55 | 98 |
blood island | 2.87e-55 | 98 |
hemolymphoid system | 2.07e-49 | 108 |
bone marrow | 6.23e-44 | 76 |
bone element | 3.18e-40 | 82 |
skeletal element | 4.86e-36 | 90 |
immune system | 1.18e-34 | 93 |
skeletal system | 9.60e-32 | 100 |
lateral plate mesoderm | 2.20e-22 | 203 |
blood | 4.08e-17 | 15 |
haemolymphatic fluid | 4.08e-17 | 15 |
organism substance | 4.08e-17 | 15 |
musculoskeletal system | 3.49e-16 | 167 |
mesoderm | 2.14e-11 | 315 |
mesoderm-derived structure | 2.14e-11 | 315 |
presumptive mesoderm | 2.14e-11 | 315 |
connective tissue | 3.95e-09 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.