FFCP PHASE1:Mm9::chr7:109017821..109017858,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14275|HGNC=|MCL_coexpression_id=206|UniProt=E9PXB5,D3Z711|association_with_transcript=0bp_to_ENSMUST00000134145,ENSMUST00000140584_5end|description=CAGE_peak_3_at_Folr1_5end|id=chr7:109017821..109017858,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!4.76e-10!24;UBERON:0005156!1.23e-09!26;UBERON:0000990!1.23e-09!26;UBERON:0002113!1.95e-08!14;UBERON:0003918!1.95e-08!14;UBERON:0005095!1.95e-08!14;UBERON:0007687!1.95e-08!14;UBERON:0006554!1.09e-07!16;UBERON:0001008!1.41e-07!17;UBERON:0000991!5.54e-07!18;UBERON:0005564!5.54e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0006554,6.03e-15,18;UBERON:0002113,2.30e-14,14;UBERON:0003918,2.30e-14,14;UBERON:0011143,2.30e-14,14;UBERON:0005095,2.30e-14,14;UBERON:0007687,2.30e-14,14;UBERON:0001008,5.99e-14,19;UBERON:0003133,2.67e-09,24;UBERON:0000489,1.59e-08,21;UBERON:0005156,2.58e-08,26;UBERON:0000990,2.58e-08,26;UBERON:0005795,2.39e-07,4;UBERON:0000995,2.39e-07,4;UBERON:0000970,2.99e-07,9;UBERON:0000019,2.99e-07,9;UBERON:0000047,2.99e-07,9;UBERON:0010312,2.99e-07,9;UBERON:0004088,2.99e-07,9;UBERON:0002104,2.99e-07,9;UBERON:0001456,2.99e-07,9;UBERON:0003072,2.99e-07,9;UBERON:0004128,2.99e-07,9;UBERON:0003071,2.99e-07,9;UBERON:0003134,3.99e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,1.30815093828268,12.7417985985994,17.3042610176112,0.419959264876088,0,0,0,0,1.28629718017973,2.86533439938757,13.9231464914909,0.202316460859598,0,0,0,0.889294796111139,0,0,0,0.599200221036809,1.53687322128622,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0.365950574409639,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66844398250329,0,0,0,0,0,0,0,0,0,0,5.36664234679582,0,0.148442139064825,0.520455980298408,0.608930956624282,1.15307748628029,0.452167921657868,1.05829836422134,0.251333182659351,15.8204779349999,0.86759614151947,0,0,0,0,0,2.34224637609238,1.04723353406728,0,0,0,0,0,1.83000241127451,0,0,0,0.62336413367868,0,2.95334155165917,0.995255764880744,1.76905930903572,2.31486041475121,0.520481771850815,0.919608417733892,2.16074555766419,1.80845781402858,1.49680298132921,2.0498195245576,1.3118241438362,7.24369438069244,0,0,0,0.219195732427575,0,0,0,0.796137067273973,0,0,0,0.207125772535502,0.469052119962192,0.900310307305074,0.473489471170421,0.196764231747404,0.462801338662135,0.697601834251224,0.536546802799238,0.583826711835847,0.329119699826961,0.492502392237286,0.162137619091711,0.438599962275997,0.439100230582101,0.536825675041487,3.78521907415429,2.88132914661996,0,0.264450566663544,0,0.232236671860439,0.38660238396628,0.605050573870028,0.22237804384487,1.14135375667535,0,1.97638745668813,1.25667604400135,1.59165177632921,1.75467678407208,0,0.216138049874694,0.199141273254367,1.13800740571849,1.02823661348756,2.25415471346161,4.07302655690629,2.52138233317913,5.40045813155453,6.63983639804701,19.0417090893687,20.8808308029028,25.1730214400473,0.296452627087149,0,0.393117990226406,0,0,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0.179397413521912,0,0,0.37898282354097,0,0.339490171550376,0,0.167506257441816,0,0,0.472905432318573,0,0.478364305972461,0.163863314715738,0.690739927463582,0,0,0,0,0,0.321101179975584,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0.395287777946524,0,0.99358059645788,3.38324646967785,1.95464351224291,0.989820737835213,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0.316036757935816,1.05418608574999,0,2.38307724027652,0.540183282093931,0,0.643011105094777,1.77340233642274,2.14042581122485,0.987294123612726,3.04464949114599,3.52007562095566,24.9961843619308,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0,0,0,0.170870880797853,0.206386867963223,0,0.188368457004691,0.27338845544205,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0.674321731924103,0.661227645802687,1.04702376793612,0,0,0,0.897099276263873,1.48912641411388,2.72231663681667,2.45403664607689,1.01373675294467,1.64300134104056,0.911430693907651,1.46803082195995,0.724752362478018,0.576060012515731,0,0,0,0,0.358053391334963,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,1.10992976687032,0.179427713218951,0.671538465456314,0.579568782096571,35.096622909371,1.83151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0.666740183404846,0.206035057238894,0,0,1.01391719956096,0,0.37456602987953,0.320125762024346,0.34461281373368,0.952587382566147,0.579421629724277,0.192909220463705,0.412085900803307,0.588795680537589,0,0.354951612318675,0,0.436039249896986,0.564656282491984,0.338458431566706,0.548783918618318,1.05227884575137,0.407412341537585,0.561142271657738,0.237270036248348,0.197008964751127,0,0.154936841185966,0.192906610981141,0.249810577937946,0.701794825336225,0.429742108096597,0,0.220591419119515,0|short_description=p3@Folr1}} | ||
|EntrezGene=14275 | |||
|HGNC= | |||
|MCL_coexpression_id=206 | |||
|UniProt=E9PXB5,D3Z711 | |||
|association_with_transcript=0bp_to_ENSMUST00000134145,ENSMUST00000140584_5end | |||
|description=CAGE_peak_3_at_Folr1_5end | |||
|id=chr7:109017821..109017858,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!4.76e-10!24;UBERON:0005156!1.23e-09!26;UBERON:0000990!1.23e-09!26;UBERON:0002113!1.95e-08!14;UBERON:0003918!1.95e-08!14;UBERON:0005095!1.95e-08!14;UBERON:0007687!1.95e-08!14;UBERON:0006554!1.09e-07!16;UBERON:0001008!1.41e-07!17;UBERON:0000991!5.54e-07!18;UBERON:0005564!5.54e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,6.03e-15,18;UBERON:0002113,2.30e-14,14;UBERON:0003918,2.30e-14,14;UBERON:0011143,2.30e-14,14;UBERON:0005095,2.30e-14,14;UBERON:0007687,2.30e-14,14;UBERON:0001008,5.99e-14,19;UBERON:0003133,2.67e-09,24;UBERON:0000489,1.59e-08,21;UBERON:0005156,2.58e-08,26;UBERON:0000990,2.58e-08,26;UBERON:0005795,2.39e-07,4;UBERON:0000995,2.39e-07,4;UBERON:0000970,2.99e-07,9;UBERON:0000019,2.99e-07,9;UBERON:0000047,2.99e-07,9;UBERON:0010312,2.99e-07,9;UBERON:0004088,2.99e-07,9;UBERON:0002104,2.99e-07,9;UBERON:0001456,2.99e-07,9;UBERON:0003072,2.99e-07,9;UBERON:0004128,2.99e-07,9;UBERON:0003071,2.99e-07,9;UBERON:0003134,3.99e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,1.30815093828268,12.7417985985994,17.3042610176112,0.419959264876088,0,0,0,0,1.28629718017973,2.86533439938757,13.9231464914909,0.202316460859598,0,0,0,0.889294796111139,0,0,0,0.599200221036809,1.53687322128622,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0.365950574409639,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66844398250329,0,0,0,0,0,0,0,0,0,0,5.36664234679582,0,0.148442139064825,0.520455980298408,0.608930956624282,1.15307748628029,0.452167921657868,1.05829836422134,0.251333182659351,15.8204779349999,0.86759614151947,0,0,0,0,0,2.34224637609238,1.04723353406728,0,0,0,0,0,1.83000241127451,0,0,0,0.62336413367868,0,2.95334155165917,0.995255764880744,1.76905930903572,2.31486041475121,0.520481771850815,0.919608417733892,2.16074555766419,1.80845781402858,1.49680298132921,2.0498195245576,1.3118241438362,7.24369438069244,0,0,0,0.219195732427575,0,0,0,0.796137067273973,0,0,0,0.207125772535502,0.469052119962192,0.900310307305074,0.473489471170421,0.196764231747404,0.462801338662135,0.697601834251224,0.536546802799238,0.583826711835847,0.329119699826961,0.492502392237286,0.162137619091711,0.438599962275997,0.439100230582101,0.536825675041487,3.78521907415429,2.88132914661996,0,0.264450566663544,0,0.232236671860439,0.38660238396628,0.605050573870028,0.22237804384487,1.14135375667535,0,1.97638745668813,1.25667604400135,1.59165177632921,1.75467678407208,0,0.216138049874694,0.199141273254367,1.13800740571849,1.02823661348756,2.25415471346161,4.07302655690629,2.52138233317913,5.40045813155453,6.63983639804701,19.0417090893687,20.8808308029028,25.1730214400473,0.296452627087149,0,0.393117990226406,0,0,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0.179397413521912,0,0,0.37898282354097,0,0.339490171550376,0,0.167506257441816,0,0,0.472905432318573,0,0.478364305972461,0.163863314715738,0.690739927463582,0,0,0,0,0,0.321101179975584,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0.395287777946524,0,0.99358059645788,3.38324646967785,1.95464351224291,0.989820737835213,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0.316036757935816,1.05418608574999,0,2.38307724027652,0.540183282093931,0,0.643011105094777,1.77340233642274,2.14042581122485,0.987294123612726,3.04464949114599,3.52007562095566,24.9961843619308,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0,0,0,0.170870880797853,0.206386867963223,0,0.188368457004691,0.27338845544205,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0.674321731924103,0.661227645802687,1.04702376793612,0,0,0,0.897099276263873,1.48912641411388,2.72231663681667,2.45403664607689,1.01373675294467,1.64300134104056,0.911430693907651,1.46803082195995,0.724752362478018,0.576060012515731,0,0,0,0,0.358053391334963,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,1.10992976687032,0.179427713218951,0.671538465456314,0.579568782096571,35.096622909371,1.83151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0.666740183404846,0.206035057238894,0,0,1.01391719956096,0,0.37456602987953,0.320125762024346,0.34461281373368,0.952587382566147,0.579421629724277,0.192909220463705,0.412085900803307,0.588795680537589,0,0.354951612318675,0,0.436039249896986,0.564656282491984,0.338458431566706,0.548783918618318,1.05227884575137,0.407412341537585,0.561142271657738,0.237270036248348,0.197008964751127,0,0.154936841185966,0.192906610981141,0.249810577937946,0.701794825336225,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p3@Folr1 | |||
}} |
Revision as of 11:19, 14 September 2013
Short description: | p3@Folr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Folr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:206 |
Association with transcript: | 0bp_to_ENSMUST00000134145, ENSMUST00000140584_5end |
EntrezGene: | Folr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urinary system structure | 6.03e-15 | 18 |
kidney | 2.30e-14 | 14 |
kidney mesenchyme | 2.30e-14 | 14 |
upper urinary tract | 2.30e-14 | 14 |
kidney rudiment | 2.30e-14 | 14 |
kidney field | 2.30e-14 | 14 |
renal system | 5.99e-14 | 19 |
reproductive organ | 2.67e-09 | 24 |
cavitated compound organ | 1.59e-08 | 21 |
reproductive structure | 2.58e-08 | 26 |
reproductive system | 2.58e-08 | 26 |
embryonic uterus | 2.39e-07 | 4 |
uterus | 2.39e-07 | 4 |
eye | 2.99e-07 | 9 |
camera-type eye | 2.99e-07 | 9 |
simple eye | 2.99e-07 | 9 |
immature eye | 2.99e-07 | 9 |
ocular region | 2.99e-07 | 9 |
visual system | 2.99e-07 | 9 |
face | 2.99e-07 | 9 |
optic cup | 2.99e-07 | 9 |
optic vesicle | 2.99e-07 | 9 |
eye primordium | 2.99e-07 | 9 |
female reproductive organ | 3.99e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.