FFCP PHASE1:Hg19::chrX:2882369..2882397,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=415|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=719|TSSclassifier=S|UniProt=F5GYY5|association_with_transcript=-44bp_to_ENST00000545496_5end|coexpression_cluster_id=C49|description=CAGE_peak_2_at_ARSE_5end|id=chrX:2882369..2882397,-|ontology_enrichment_celltype=CL:0002322!2.28e-07!5|ontology_enrichment_celltype_v019=CL:0002322;1.39e-20;5!CL:0000039;1.11e-09;7!CL:0000586;1.11e-09;7!CL:0000669;4.61e-09;4!CL:0000650;1.82e-08;2!CL:1000500;1.82e-08;2!CL:1000618;1.82e-08;2!CL:1001318;1.82e-08;2!CL:0002173;1.82e-08;2|ontology_enrichment_celltype_v019_2=CL:0002322,1.37e-20,5;CL:0000039,1.08e-09,7;CL:0000586,1.08e-09,7;CL:0000669,5.16e-09,4;CL:0000650,2.60e-08,2;CL:1000500,2.60e-08,2;CL:1000618,2.60e-08,2;CL:1001318,2.60e-08,2;CL:0002173,2.60e-08,2|ontology_enrichment_development_v019=UBERON:0009117;5.12e-14;10!UBERON:0005564;5.12e-14;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3095;3.91e-08;22!DOID:2994;3.91e-08;22|ontology_enrichment_disease_v019_2=DOID:3095,4.10e-08,22;DOID:2994,4.10e-08,22|ontology_enrichment_uberon=UBERON:0001017!4.14e-13!82;UBERON:0005743!1.17e-12!86;UBERON:0000073!5.44e-11!94;UBERON:0001016!5.44e-11!94;UBERON:0002616!9.47e-10!59;UBERON:0000955!1.65e-09!69;UBERON:0006238!1.65e-09!69;UBERON:0001049!3.11e-09!57;UBERON:0005068!3.11e-09!57;UBERON:0006241!3.11e-09!57;UBERON:0007135!3.11e-09!57;UBERON:0000033!1.09e-08!123;UBERON:0003075!1.52e-08!86;UBERON:0007284!1.52e-08!86;UBERON:0000153!4.04e-08!129;UBERON:0007811!4.04e-08!129;UBERON:0004121!1.10e-07!169;UBERON:0002346!1.12e-07!90;UBERON:0000025!1.92e-07!194;UBERON:0000924!3.79e-07!173;UBERON:0006601!3.79e-07!173;UBERON:0000477!7.06e-07!286;UBERON:0002200!9.85e-07!11;UBERON:0006876!9.85e-07!11|ontology_enrichment_uberon_v019=UBERON:0000922;1.85e-10;49!UBERON:0000473;1.82e-08;8!UBERON:0003567;1.82e-08;2!UBERON:0003838;1.82e-08;2!UBERON:0003586;1.82e-08;2!UBERON:0005169;1.82e-08;2!UBERON:0002321;1.82e-08;2!UBERON:0005215;1.82e-08;2!UBERON:0002303;1.82e-08;2!UBERON:0002319;1.82e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.78e-08,8;UBERON:0003567,2.60e-08,2;UBERON:0003838,2.60e-08,2;UBERON:0003586,2.60e-08,2;UBERON:0005169,2.60e-08,2;UBERON:0002321,2.60e-08,2;UBERON:0005215,2.60e-08,2;UBERON:0002303,2.60e-08,2;UBERON:0002319,2.60e-08,2|phase1_expression=0.181678379270557,0,0,0,0,0,2.53299878168311,0,0,0,0,0.218441372130172,0,0.74259811776028,0,0,0,0,0,0.61560529038394,0.408001382488506,2.19418305034661,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.12786256184353,0,0,0,0,0,0.378139268656271,0.443458794925128,0.614843499851882,0.523916301990851,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0,0.838998872419812,0,0,0.516833518338658,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,1.66493170409425,0,0,0,0,0.149448680551801,0,0,0,0.408308342509787,0.122834317311768,0,1.18800285728205,0.741800787835671,0,0,0.168336113954066,1.25118519871964,0.277064115484183,0,0,0,0.113432183160021,0.717558542755448,0.427114777637135,0,0.300091096084402,0,0.257640540045629,0,0,0,0,0,0.646584227275248,0,0,0,0,0,0,8.66013313520127,13.7830959054345,14.2918549729508,5.90868013587612,15.8962136051646,11.6792754904266,0,0,0,0,0.721879481669586,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.448524337381443,0,0.7333828582095,0.517086863031111,0,0,1.32969058292435,1.04007436911366,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.613457458595699,1.50051156317903,0,0.623912584592421,0,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0.0868836144680828,2.54541504701563,0.686286847621712,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0.431831832204279,0,1.08378575017541,3.01013864312912,0,0,0.223874754722178,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,2.232950216158,0.949138274156178,0.38126038784765,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0,0.379473173765715,1.04980416073495,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=415 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=719 | |||
|TSSclassifier=S | |||
|UniProt=F5GYY5 | |||
|association_with_transcript=-44bp_to_ENST00000545496_5end | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_2_at_ARSE_5end | |||
|id=chrX:2882369..2882397,- | |||
|ontology_enrichment_celltype=CL:0002322!2.28e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.39e-20;5!CL:0000039;1.11e-09;7!CL:0000586;1.11e-09;7!CL:0000669;4.61e-09;4!CL:0000650;1.82e-08;2!CL:1000500;1.82e-08;2!CL:1000618;1.82e-08;2!CL:1001318;1.82e-08;2!CL:0002173;1.82e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.37e-20,5;CL:0000039,1.08e-09,7;CL:0000586,1.08e-09,7;CL:0000669,5.16e-09,4;CL:0000650,2.60e-08,2;CL:1000500,2.60e-08,2;CL:1000618,2.60e-08,2;CL:1001318,2.60e-08,2;CL:0002173,2.60e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.12e-14;10!UBERON:0005564;5.12e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;3.91e-08;22!DOID:2994;3.91e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.10e-08,22;DOID:2994,4.10e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.14e-13!82;UBERON:0005743!1.17e-12!86;UBERON:0000073!5.44e-11!94;UBERON:0001016!5.44e-11!94;UBERON:0002616!9.47e-10!59;UBERON:0000955!1.65e-09!69;UBERON:0006238!1.65e-09!69;UBERON:0001049!3.11e-09!57;UBERON:0005068!3.11e-09!57;UBERON:0006241!3.11e-09!57;UBERON:0007135!3.11e-09!57;UBERON:0000033!1.09e-08!123;UBERON:0003075!1.52e-08!86;UBERON:0007284!1.52e-08!86;UBERON:0000153!4.04e-08!129;UBERON:0007811!4.04e-08!129;UBERON:0004121!1.10e-07!169;UBERON:0002346!1.12e-07!90;UBERON:0000025!1.92e-07!194;UBERON:0000924!3.79e-07!173;UBERON:0006601!3.79e-07!173;UBERON:0000477!7.06e-07!286;UBERON:0002200!9.85e-07!11;UBERON:0006876!9.85e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.85e-10;49!UBERON:0000473;1.82e-08;8!UBERON:0003567;1.82e-08;2!UBERON:0003838;1.82e-08;2!UBERON:0003586;1.82e-08;2!UBERON:0005169;1.82e-08;2!UBERON:0002321;1.82e-08;2!UBERON:0005215;1.82e-08;2!UBERON:0002303;1.82e-08;2!UBERON:0002319;1.82e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.78e-08,8;UBERON:0003567,2.60e-08,2;UBERON:0003838,2.60e-08,2;UBERON:0003586,2.60e-08,2;UBERON:0005169,2.60e-08,2;UBERON:0002321,2.60e-08,2;UBERON:0005215,2.60e-08,2;UBERON:0002303,2.60e-08,2;UBERON:0002319,2.60e-08,2 | |||
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| |||
|short_description=p2@ARSE | |||
}} |
Revision as of 11:41, 14 September 2013
Short description: | p2@ARSE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ARSE_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -44bp_to_ENST00000545496_5end |
EntrezGene: | ARSE |
HGNC: | 719 |
UniProt: | F5GYY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.37e-20 | 5 |
germ line cell | 1.08e-09 | 7 |
germ cell | 1.08e-09 | 7 |
pericyte cell | 5.16e-09 | 4 |
mesangial cell | 2.60e-08 | 2 |
kidney interstitial cell | 2.60e-08 | 2 |
juxtaglomerular complex cell | 2.60e-08 | 2 |
renal interstitial pericyte | 2.60e-08 | 2 |
extraglomerular mesangial cell | 2.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 1.78e-08 | 8 |
abdomen connective tissue | 2.60e-08 | 2 |
abdominal segment connective tissue | 2.60e-08 | 2 |
trunk connective tissue | 2.60e-08 | 2 |
interstitial tissue | 2.60e-08 | 2 |
extraglomerular mesangium | 2.60e-08 | 2 |
kidney interstitium | 2.60e-08 | 2 |
juxtaglomerular apparatus | 2.60e-08 | 2 |
mesangium | 2.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.10e-08 | 22 |
germ cell cancer | 4.10e-08 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.