FFCP PHASE1:Hg19::chrX:37642712..37642750,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1536|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=2578|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_uc011mkg.1_5end|coexpression_cluster_id=C26|description=CAGE_peak_3_at_CYBB_5end|id=chrX:37642712..37642750,+|ontology_enrichment_celltype=CL:0002057!1.61e-55!42;CL:0002194!8.87e-55!63;CL:0000576!8.87e-55!63;CL:0000040!8.87e-55!63;CL:0000559!8.87e-55!63;CL:0002009!2.18e-54!65;CL:0000766!3.21e-54!76;CL:0000860!1.17e-50!45;CL:0000557!4.63e-48!71;CL:0000839!2.79e-47!70;CL:0000738!1.56e-39!140;CL:0000763!9.48e-39!112;CL:0000049!9.48e-39!112;CL:0002087!2.78e-36!119;CL:0000037!1.74e-32!172;CL:0000566!1.74e-32!172;CL:0002031!5.33e-31!124;CL:0002032!2.19e-29!165;CL:0000837!2.19e-29!165;CL:0000988!3.33e-29!182;CL:0002393!1.16e-12!9;CL:0002397!1.16e-12!9|ontology_enrichment_celltype_v019=CL:0000860;1.37e-78;33!CL:0002057;1.37e-78;33!CL:0000473;2.89e-78;39!CL:0000234;2.89e-78;39!CL:0000576;2.85e-64;48!CL:0000766;1.04e-47;69!CL:0000763;1.16e-23;100!CL:0002087;1.28e-18;104!CL:0002393;5.08e-17;6!CL:0002397;5.08e-17;6!CL:0000235;3.69e-16;6!CL:0000738;9.74e-15;136!CL:0000988;1.28e-09;177!CL:0000767;6.26e-09;3!CL:0000875;2.10e-08;3!CL:0002396;2.10e-08;3!CL:0000094;4.50e-08;8!CL:0000226;4.78e-08;3!CL:0000842;4.78e-08;3|ontology_enrichment_celltype_v019_2=CL:0000473,9.58e-126,48;CL:0000234,9.58e-126,48;CL:0002194,2.28e-110,59;CL:0000576,2.28e-110,59;CL:0000040,2.28e-110,59;CL:0000559,2.28e-110,59;CL:0000860,3.35e-110,42;CL:0002057,3.35e-110,42;CL:0000766,7.96e-108,72;CL:0002009,2.31e-106,61;CL:0000839,2.16e-97,66;CL:0000557,9.31e-96,67;CL:0000763,1.33e-72,108;CL:0000049,1.33e-72,108;CL:0002087,4.94e-67,115;CL:0000738,4.28e-66,136;CL:0002031,1.48e-56,120;CL:0000037,2.06e-54,168;CL:0002032,1.89e-51,161;CL:0000837,1.89e-51,161;CL:0000988,7.13e-51,177;CL:0002393,9.30e-24,9;CL:0002397,9.30e-24,9;CL:0000134,9.93e-18,354;CL:0002320,4.36e-17,361;CL:0000235,4.39e-16,6;CL:0000219,7.97e-15,386;CL:0000048,4.54e-12,427;CL:0000723,1.09e-11,433;CL:0000034,3.35e-11,441;CL:0000767,6.34e-09,3;CL:0000875,1.89e-08,3;CL:0002396,1.89e-08,3;CL:0000226,4.00e-08,3;CL:0000842,4.00e-08,3;CL:0000094,4.06e-08,8|ontology_enrichment_development_v019=CL:0002057;4.13e-78;42!CL:0000049;1.28e-21;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.40e-50!102;UBERON:0003061!5.40e-50!102;UBERON:0002193!3.76e-46!112;UBERON:0002371!2.28e-40!80;UBERON:0001474!3.76e-36!86;UBERON:0002405!1.65e-29!115;UBERON:0004765!6.01e-29!101;UBERON:0001434!6.01e-29!101;UBERON:0007023!2.94e-28!115;UBERON:0003081!8.83e-16!216;UBERON:0002204!9.12e-13!167;UBERON:0000178!7.07e-09!15;UBERON:0000179!7.07e-09!15;UBERON:0000463!7.07e-09!15;UBERON:0001893!1.41e-08!34;UBERON:0001049!4.05e-08!57;UBERON:0005068!4.05e-08!57;UBERON:0006241!4.05e-08!57;UBERON:0007135!4.05e-08!57;UBERON:0002791!5.19e-08!33;UBERON:0003080!1.05e-07!42;UBERON:0001869!1.94e-07!32;UBERON:0002780!4.13e-07!41;UBERON:0001890!4.13e-07!41;UBERON:0006240!4.13e-07!41;UBERON:0002420!5.33e-07!9;UBERON:0007245!5.33e-07!9;UBERON:0010009!5.33e-07!9;UBERON:0010011!5.33e-07!9;UBERON:0000454!5.33e-07!9;UBERON:0002020!7.99e-07!34;UBERON:0003528!7.99e-07!34|ontology_enrichment_uberon_v019=UBERON:0000178;1.09e-17;15!UBERON:0000179;1.09e-17;15!UBERON:0000463;1.09e-17;15!UBERON:0002390;5.15e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.36e-93,98;UBERON:0003061,2.36e-93,98;UBERON:0002193,2.18e-83,108;UBERON:0002371,5.98e-83,76;UBERON:0001474,5.91e-76,82;UBERON:0004765,4.58e-68,90;UBERON:0002405,1.88e-65,93;UBERON:0001434,5.81e-60,100;UBERON:0003081,6.57e-39,203;UBERON:0002204,1.31e-30,167;UBERON:0000926,1.29e-20,315;UBERON:0004120,1.29e-20,315;UBERON:0006603,1.29e-20,315;UBERON:0000178,1.14e-17,15;UBERON:0000179,1.14e-17,15;UBERON:0000463,1.14e-17,15;UBERON:0002384,3.28e-16,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,3.36218985290986,3.69452652524756,4.25038219093868,5.11373559903575,8.44424675813868,5.88301268601089,0,0,0,0,0,0,6.64794490238253,8.62341124121609,5.64228263861215,0.447830948479849,1.6194683300949,2.57575567634187,6.54292074508041,6.80176698639857,6.79235371325885,11.8538808821899,3.70051099219643,8.05236564327269,8.91846416198666,5.63553554364021,8.27687804610048,8.27389633767885,10.973239620925,4.06279459783025,7.15320890261898,6.00393530127261,11.6856211911444,8.57034898638527,7.38136762275015,8.95071976118658,9.56568770541477,5.78444607102732,6.81959600852311,16.8321358404579,7.94339314567596,11.2108004819203,5.7787193009051,6.77927793946262,7.38442071997397,4.23779651843358,10.3117738076518,12.6584954976354,10.5627643155971,9.56719349842696,9.01532175686016,11.569849008089,15.7685737483582,11.0900654820985,3.42015292489498,5.76858363877361,4.74926799788048,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602300476311091,0.38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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1536 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2578 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc011mkg.1_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_3_at_CYBB_5end | |||
|id=chrX:37642712..37642750,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.61e-55!42;CL:0002194!8.87e-55!63;CL:0000576!8.87e-55!63;CL:0000040!8.87e-55!63;CL:0000559!8.87e-55!63;CL:0002009!2.18e-54!65;CL:0000766!3.21e-54!76;CL:0000860!1.17e-50!45;CL:0000557!4.63e-48!71;CL:0000839!2.79e-47!70;CL:0000738!1.56e-39!140;CL:0000763!9.48e-39!112;CL:0000049!9.48e-39!112;CL:0002087!2.78e-36!119;CL:0000037!1.74e-32!172;CL:0000566!1.74e-32!172;CL:0002031!5.33e-31!124;CL:0002032!2.19e-29!165;CL:0000837!2.19e-29!165;CL:0000988!3.33e-29!182;CL:0002393!1.16e-12!9;CL:0002397!1.16e-12!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.37e-78;33!CL:0002057;1.37e-78;33!CL:0000473;2.89e-78;39!CL:0000234;2.89e-78;39!CL:0000576;2.85e-64;48!CL:0000766;1.04e-47;69!CL:0000763;1.16e-23;100!CL:0002087;1.28e-18;104!CL:0002393;5.08e-17;6!CL:0002397;5.08e-17;6!CL:0000235;3.69e-16;6!CL:0000738;9.74e-15;136!CL:0000988;1.28e-09;177!CL:0000767;6.26e-09;3!CL:0000875;2.10e-08;3!CL:0002396;2.10e-08;3!CL:0000094;4.50e-08;8!CL:0000226;4.78e-08;3!CL:0000842;4.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.58e-126,48;CL:0000234,9.58e-126,48;CL:0002194,2.28e-110,59;CL:0000576,2.28e-110,59;CL:0000040,2.28e-110,59;CL:0000559,2.28e-110,59;CL:0000860,3.35e-110,42;CL:0002057,3.35e-110,42;CL:0000766,7.96e-108,72;CL:0002009,2.31e-106,61;CL:0000839,2.16e-97,66;CL:0000557,9.31e-96,67;CL:0000763,1.33e-72,108;CL:0000049,1.33e-72,108;CL:0002087,4.94e-67,115;CL:0000738,4.28e-66,136;CL:0002031,1.48e-56,120;CL:0000037,2.06e-54,168;CL:0002032,1.89e-51,161;CL:0000837,1.89e-51,161;CL:0000988,7.13e-51,177;CL:0002393,9.30e-24,9;CL:0002397,9.30e-24,9;CL:0000134,9.93e-18,354;CL:0002320,4.36e-17,361;CL:0000235,4.39e-16,6;CL:0000219,7.97e-15,386;CL:0000048,4.54e-12,427;CL:0000723,1.09e-11,433;CL:0000034,3.35e-11,441;CL:0000767,6.34e-09,3;CL:0000875,1.89e-08,3;CL:0002396,1.89e-08,3;CL:0000226,4.00e-08,3;CL:0000842,4.00e-08,3;CL:0000094,4.06e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.13e-78;42!CL:0000049;1.28e-21;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.40e-50!102;UBERON:0003061!5.40e-50!102;UBERON:0002193!3.76e-46!112;UBERON:0002371!2.28e-40!80;UBERON:0001474!3.76e-36!86;UBERON:0002405!1.65e-29!115;UBERON:0004765!6.01e-29!101;UBERON:0001434!6.01e-29!101;UBERON:0007023!2.94e-28!115;UBERON:0003081!8.83e-16!216;UBERON:0002204!9.12e-13!167;UBERON:0000178!7.07e-09!15;UBERON:0000179!7.07e-09!15;UBERON:0000463!7.07e-09!15;UBERON:0001893!1.41e-08!34;UBERON:0001049!4.05e-08!57;UBERON:0005068!4.05e-08!57;UBERON:0006241!4.05e-08!57;UBERON:0007135!4.05e-08!57;UBERON:0002791!5.19e-08!33;UBERON:0003080!1.05e-07!42;UBERON:0001869!1.94e-07!32;UBERON:0002780!4.13e-07!41;UBERON:0001890!4.13e-07!41;UBERON:0006240!4.13e-07!41;UBERON:0002420!5.33e-07!9;UBERON:0007245!5.33e-07!9;UBERON:0010009!5.33e-07!9;UBERON:0010011!5.33e-07!9;UBERON:0000454!5.33e-07!9;UBERON:0002020!7.99e-07!34;UBERON:0003528!7.99e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.09e-17;15!UBERON:0000179;1.09e-17;15!UBERON:0000463;1.09e-17;15!UBERON:0002390;5.15e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.36e-93,98;UBERON:0003061,2.36e-93,98;UBERON:0002193,2.18e-83,108;UBERON:0002371,5.98e-83,76;UBERON:0001474,5.91e-76,82;UBERON:0004765,4.58e-68,90;UBERON:0002405,1.88e-65,93;UBERON:0001434,5.81e-60,100;UBERON:0003081,6.57e-39,203;UBERON:0002204,1.31e-30,167;UBERON:0000926,1.29e-20,315;UBERON:0004120,1.29e-20,315;UBERON:0006603,1.29e-20,315;UBERON:0000178,1.14e-17,15;UBERON:0000179,1.14e-17,15;UBERON:0000463,1.14e-17,15;UBERON:0002384,3.28e-16,371 | |||
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|short_description=p3@CYBB | |||
}} |
Revision as of 11:47, 14 September 2013
Short description: | p3@CYBB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CYBB_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_uc011mkg.1_5end |
EntrezGene: | CYBB |
HGNC: | 2578 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.36e-93 | 98 |
blood island | 2.36e-93 | 98 |
hemolymphoid system | 2.18e-83 | 108 |
bone marrow | 5.98e-83 | 76 |
bone element | 5.91e-76 | 82 |
skeletal element | 4.58e-68 | 90 |
immune system | 1.88e-65 | 93 |
skeletal system | 5.81e-60 | 100 |
lateral plate mesoderm | 6.57e-39 | 203 |
musculoskeletal system | 1.31e-30 | 167 |
mesoderm | 1.29e-20 | 315 |
mesoderm-derived structure | 1.29e-20 | 315 |
presumptive mesoderm | 1.29e-20 | 315 |
blood | 1.14e-17 | 15 |
haemolymphatic fluid | 1.14e-17 | 15 |
organism substance | 1.14e-17 | 15 |
connective tissue | 3.28e-16 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.