FFCP PHASE1:Hg19::chrX:71247360..71247392,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:71247360..71247392,+|id=chrX:71247360..71247392,+|ontology_enrichment_celltype=CL:0000057!1.42e-24!75;CL:0002620!2.16e-20!23;CL:0000055!3.80e-15!180;CL:0002556!1.79e-08!6;CL:0002552!1.86e-07!5|ontology_enrichment_celltype_v019=CL:0002620;3.20e-25;23!CL:0000057;1.22e-11;73!CL:0002552;2.32e-09;5!CL:0000197;8.48e-09;6!CL:0000098;8.48e-09;6!CL:0002167;8.48e-09;6!CL:0002556;2.86e-08;6!CL:0002549;6.34e-07;2|ontology_enrichment_celltype_v019_2=CL:0000057,5.02e-28,76;CL:0002620,5.59e-25,23;CL:0002552,1.50e-09,5;CL:0000197,8.13e-09,6;CL:0000098,8.13e-09,6;CL:0002167,8.13e-09,6;CL:0002556,3.21e-08,6;CL:0002549,5.19e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!4.43e-08!5;DOID:450!4.43e-08!5;DOID:66!4.43e-08!5;DOID:423!4.43e-08!5;DOID:0080000!4.43e-08!5;DOID:11722!4.43e-08!5|ontology_enrichment_disease_v019=DOID:17;5.11e-15;5!DOID:450;5.11e-15;5!DOID:66;5.11e-15;5!DOID:423;5.11e-15;5!DOID:0080000;5.11e-15;5!DOID:11722;5.11e-15;5|ontology_enrichment_disease_v019_2=DOID:17,4.74e-15,5;DOID:450,4.74e-15,5;DOID:66,4.74e-15,5;DOID:423,4.74e-15,5;DOID:0080000,4.74e-15,5;DOID:11722,4.74e-15,5;DOID:3307,9.02e-07,2|ontology_enrichment_uberon=UBERON:0003102!5.04e-17!95;UBERON:0002199!4.56e-14!45;UBERON:0002416!4.56e-14!45;UBERON:0002097!4.68e-14!40;UBERON:0001758!1.79e-08!6;UBERON:0003672!1.79e-08!6|ontology_enrichment_uberon_v019=UBERON:0002097;4.34e-14;41!UBERON:0002199;2.31e-12;46!UBERON:0002416;2.31e-12;46!UBERON:0003102;2.72e-10;50!UBERON:0006947;7.21e-09;3!UBERON:0004054;7.21e-09;3!UBERON:0001758;2.86e-08;6!UBERON:0003672;2.86e-08;6!UBERON:0003129;4.45e-07;7!UBERON:0005629;6.34e-07;2!UBERON:0005358;6.34e-07;2!UBERON:0001886;6.34e-07;2!UBERON:0004086;6.34e-07;2!UBERON:0005282;6.34e-07;2!UBERON:0005281;6.34e-07;2!UBERON:0005904;9.58e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.06e-18,99;UBERON:0002097,3.10e-18,41;UBERON:0002199,1.22e-17,46;UBERON:0002416,1.22e-17,46;UBERON:0006947,1.96e-08,3;UBERON:0004054,1.96e-08,3;UBERON:0001758,3.21e-08,6;UBERON:0003672,3.21e-08,6;UBERON:0003129,4.92e-07,7;UBERON:0005629,5.19e-07,2;UBERON:0005358,5.19e-07,2;UBERON:0001886,5.19e-07,2;UBERON:0004086,5.19e-07,2;UBERON:0005282,5.19e-07,2;UBERON:0005281,5.19e-07,2;UBERON:0001444,6.21e-07,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0,0,0,0,0,0.24666754841716,0,0,0,2.27036141467397,2.88087962239999,0.70296429550139,0.936480230490962,0,1.34503812496621,0.822041490506354,0.323745888736263,0.421352420106746,4.08308342509786,1.96534907698829,1.54988671763648,2.37600571456411,0.741800787835671,0,0,0.505008341862199,2.12701483782339,0.831192346452549,5.26773145057006,2.75839016219118,2.10333282469236,0,2.51145489964407,3.41691822109708,1.48352330811693,3.00091096084402,5.15262646192194,3.09168648054755,1.48893485065272,1.18143432568886,0.779496041289589,2.01947019395292,3.58994604704967,7.27407255684654,2.84007674013291,2.21654616100809,2.20428770003634,0,0,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07986957055916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0,0.36669142910475,1.55126058909333,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.15071790735551,8.20773348466944,3.94256037584837,6.67706065458465,0.902838299183157,2.27407504055985,0,3.32112799267718,0.553107505625109,6.42938747063813,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0.616838775210622,1.42049380250502,1.31403449622095,0,1.39452454151951,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64340221096607,0.154048617114644,0,0.275673144969061,0.751941714077915,0.290033387828457,0,1.95870478422822,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0.372158369359667,0,0,0,0.855877976067841,1.27281299170375,0,0,0,0,0,0,0,0,0,0,0.682499557039929,0,0,0,0.66343897524122,0,0,1.31178950409327,0,0.6196469961995,0.281695602532241,0,0,0,0,0,0.329294892959902,1.89736586882858,1.39973888097993,0,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,1.79323189425963,0.552567831062295,0,0,0,0.933118762985422,0,0,0,2.26879832964947,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:71247360..71247392,+ | |||
|id=chrX:71247360..71247392,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.42e-24!75;CL:0002620!2.16e-20!23;CL:0000055!3.80e-15!180;CL:0002556!1.79e-08!6;CL:0002552!1.86e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.20e-25;23!CL:0000057;1.22e-11;73!CL:0002552;2.32e-09;5!CL:0000197;8.48e-09;6!CL:0000098;8.48e-09;6!CL:0002167;8.48e-09;6!CL:0002556;2.86e-08;6!CL:0002549;6.34e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.02e-28,76;CL:0002620,5.59e-25,23;CL:0002552,1.50e-09,5;CL:0000197,8.13e-09,6;CL:0000098,8.13e-09,6;CL:0002167,8.13e-09,6;CL:0002556,3.21e-08,6;CL:0002549,5.19e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!4.43e-08!5;DOID:450!4.43e-08!5;DOID:66!4.43e-08!5;DOID:423!4.43e-08!5;DOID:0080000!4.43e-08!5;DOID:11722!4.43e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;5.11e-15;5!DOID:450;5.11e-15;5!DOID:66;5.11e-15;5!DOID:423;5.11e-15;5!DOID:0080000;5.11e-15;5!DOID:11722;5.11e-15;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.74e-15,5;DOID:450,4.74e-15,5;DOID:66,4.74e-15,5;DOID:423,4.74e-15,5;DOID:0080000,4.74e-15,5;DOID:11722,4.74e-15,5;DOID:3307,9.02e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003102!5.04e-17!95;UBERON:0002199!4.56e-14!45;UBERON:0002416!4.56e-14!45;UBERON:0002097!4.68e-14!40;UBERON:0001758!1.79e-08!6;UBERON:0003672!1.79e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.34e-14;41!UBERON:0002199;2.31e-12;46!UBERON:0002416;2.31e-12;46!UBERON:0003102;2.72e-10;50!UBERON:0006947;7.21e-09;3!UBERON:0004054;7.21e-09;3!UBERON:0001758;2.86e-08;6!UBERON:0003672;2.86e-08;6!UBERON:0003129;4.45e-07;7!UBERON:0005629;6.34e-07;2!UBERON:0005358;6.34e-07;2!UBERON:0001886;6.34e-07;2!UBERON:0004086;6.34e-07;2!UBERON:0005282;6.34e-07;2!UBERON:0005281;6.34e-07;2!UBERON:0005904;9.58e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.06e-18,99;UBERON:0002097,3.10e-18,41;UBERON:0002199,1.22e-17,46;UBERON:0002416,1.22e-17,46;UBERON:0006947,1.96e-08,3;UBERON:0004054,1.96e-08,3;UBERON:0001758,3.21e-08,6;UBERON:0003672,3.21e-08,6;UBERON:0003129,4.92e-07,7;UBERON:0005629,5.19e-07,2;UBERON:0005358,5.19e-07,2;UBERON:0001886,5.19e-07,2;UBERON:0004086,5.19e-07,2;UBERON:0005282,5.19e-07,2;UBERON:0005281,5.19e-07,2;UBERON:0001444,6.21e-07,49 | |||
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|short_description=p@chrX:71247360..71247392,+ | |||
}} |
Revision as of 12:28, 14 September 2013
Short description: | p@chrX:71247360..71247392, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:71247360..71247392, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.02e-28 | 76 |
skin fibroblast | 5.59e-25 | 23 |
fibroblast of gingiva | 1.50e-09 | 5 |
receptor cell | 8.13e-09 | 6 |
sensory epithelial cell | 8.13e-09 | 6 |
olfactory epithelial cell | 8.13e-09 | 6 |
fibroblast of periodontium | 3.21e-08 | 6 |
fibroblast of choroid plexus | 5.19e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.06e-18 | 99 |
skin of body | 3.10e-18 | 41 |
integument | 1.22e-17 | 46 |
integumental system | 1.22e-17 | 46 |
male genital duct | 1.96e-08 | 3 |
internal male genitalia | 1.96e-08 | 3 |
periodontium | 3.21e-08 | 6 |
dentition | 3.21e-08 | 6 |
skull | 4.92e-07 | 7 |
vascular plexus | 5.19e-07 | 2 |
ventricle of nervous system | 5.19e-07 | 2 |
choroid plexus | 5.19e-07 | 2 |
brain ventricle | 5.19e-07 | 2 |
ventricular system of brain | 5.19e-07 | 2 |
ventricular system of central nervous system | 5.19e-07 | 2 |
subdivision of head | 6.21e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.74e-15 | 5 |
myotonic disease | 4.74e-15 | 5 |
muscle tissue disease | 4.74e-15 | 5 |
myopathy | 4.74e-15 | 5 |
muscular disease | 4.74e-15 | 5 |
myotonic dystrophy | 4.74e-15 | 5 |
teratoma | 9.02e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.