FFCP PHASE1:Mm9::chr7:18989385..18989390,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:18989385..18989390,-|id=chr7:18989385..18989390,-|ontology_enrichment_celltype=CL:0000075!1.91e-08!7;CL:0000473!4.01e-08!3;CL:0000627!4.01e-08!3;CL:0000682!4.01e-08!3;CL:0000066!1.49e-07!25;CL:0000239!9.95e-07!6;CL:0000677!9.95e-07!6;CL:0000212!9.95e-07!6;CL:0000584!9.95e-07!6|ontology_enrichment_celltype_v019_2=CL:0000682,1.30e-21,3;CL:0000239,9.65e-19,6;CL:0000677,9.65e-19,6;CL:0000584,9.65e-19,6;CL:0000075,4.10e-16,7;CL:0000066,3.68e-13,25;CL:0002563,1.34e-12,9;CL:0002251,1.34e-12,9;CL:0000473,1.31e-09,7;CL:0002076,1.19e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!6.01e-11!5;UBERON:0001003!6.01e-11!5;UBERON:0002097!6.01e-11!5;UBERON:0002199!6.01e-11!5;UBERON:0007029!6.01e-11!5;UBERON:0007376!6.01e-11!5;UBERON:0002416!6.01e-11!5;UBERON:0007383!6.01e-11!5;UBERON:0000485!1.39e-09!11;UBERON:0000344!6.44e-09!15;UBERON:0004923!6.08e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.01e-21,15;UBERON:0004923,1.64e-17,24;UBERON:0001962,4.26e-14,2;UBERON:0001961,4.26e-14,2;UBERON:0001744,4.26e-14,2;UBERON:0001242,2.84e-13,13;UBERON:0001262,2.84e-13,13;UBERON:0004786,2.84e-13,13;UBERON:0003350,1.34e-12,9;UBERON:0004808,1.34e-12,9;UBERON:0001277,1.34e-12,9;UBERON:0000485,2.34e-10,11;UBERON:0002465,1.03e-09,3;UBERON:0003199,7.68e-08,1|phase1_expression=0.640595388419176,8.02643437570531,11.8299802241279,0,0,3.02182689441402,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0,1.75991665072747,1.37645568640302,5.16808767703518,10.3382879078178,7.97243560937789,0,0,4.6563407237614,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0.244981598429908,0.479227355091182,0,0,0,0,0,0.365950574409639,0,0,0,0,0,0,0.186399445825301,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2958017715955,0.220528398054962,1.31909002353184,0.484393280087717,0.241251699712623,0.596861720015682,1.14898629821543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0.335769232728157,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr7:18989385..18989390,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:18989385..18989390,- | |||
|id=chr7:18989385..18989390,- | |||
|ontology_enrichment_celltype=CL:0000075!1.91e-08!7;CL:0000473!4.01e-08!3;CL:0000627!4.01e-08!3;CL:0000682!4.01e-08!3;CL:0000066!1.49e-07!25;CL:0000239!9.95e-07!6;CL:0000677!9.95e-07!6;CL:0000212!9.95e-07!6;CL:0000584!9.95e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.30e-21,3;CL:0000239,9.65e-19,6;CL:0000677,9.65e-19,6;CL:0000584,9.65e-19,6;CL:0000075,4.10e-16,7;CL:0000066,3.68e-13,25;CL:0002563,1.34e-12,9;CL:0002251,1.34e-12,9;CL:0000473,1.31e-09,7;CL:0002076,1.19e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!6.01e-11!5;UBERON:0001003!6.01e-11!5;UBERON:0002097!6.01e-11!5;UBERON:0002199!6.01e-11!5;UBERON:0007029!6.01e-11!5;UBERON:0007376!6.01e-11!5;UBERON:0002416!6.01e-11!5;UBERON:0007383!6.01e-11!5;UBERON:0000485!1.39e-09!11;UBERON:0000344!6.44e-09!15;UBERON:0004923!6.08e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.01e-21,15;UBERON:0004923,1.64e-17,24;UBERON:0001962,4.26e-14,2;UBERON:0001961,4.26e-14,2;UBERON:0001744,4.26e-14,2;UBERON:0001242,2.84e-13,13;UBERON:0001262,2.84e-13,13;UBERON:0004786,2.84e-13,13;UBERON:0003350,1.34e-12,9;UBERON:0004808,1.34e-12,9;UBERON:0001277,1.34e-12,9;UBERON:0000485,2.34e-10,11;UBERON:0002465,1.03e-09,3;UBERON:0003199,7.68e-08,1 | |||
|phase1_expression=0.640595388419176,8.02643437570531,11.8299802241279,0,0,3.02182689441402,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0,1.75991665072747,1.37645568640302,5.16808767703518,10.3382879078178,7.97243560937789,0,0,4.6563407237614,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0.244981598429908,0.479227355091182,0,0,0,0,0,0.365950574409639,0,0,0,0,0,0,0.186399445825301,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2958017715955,0.220528398054962,1.31909002353184,0.484393280087717,0.241251699712623,0.596861720015682,1.14898629821543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0.335769232728157,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr7:18989385..18989390,- | |||
}} |
Revision as of 12:38, 14 September 2013
Short description: | p@chr7:18989385..18989390, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:18989385..18989390, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.30e-21 | 3 |
brush border epithelial cell | 9.65e-19 | 6 |
gut absorptive cell | 9.65e-19 | 6 |
enterocyte | 9.65e-19 | 6 |
columnar/cuboidal epithelial cell | 4.10e-16 | 7 |
epithelial cell | 3.68e-13 | 25 |
intestinal epithelial cell | 1.34e-12 | 9 |
epithelial cell of alimentary canal | 1.34e-12 | 9 |
defensive cell | 1.31e-09 | 7 |
endo-epithelial cell | 1.19e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.01e-21 | 15 |
organ component layer | 1.64e-17 | 24 |
gut-associated lymphoid tissue | 4.26e-14 | 2 |
mucosa-associated lymphoid tissue | 4.26e-14 | 2 |
lymphoid tissue | 4.26e-14 | 2 |
intestinal mucosa | 2.84e-13 | 13 |
wall of intestine | 2.84e-13 | 13 |
gastrointestinal system mucosa | 2.84e-13 | 13 |
epithelium of mucosa | 1.34e-12 | 9 |
gastrointestinal system epithelium | 1.34e-12 | 9 |
intestinal epithelium | 1.34e-12 | 9 |
simple columnar epithelium | 2.34e-10 | 11 |
lymphoid system | 1.03e-09 | 3 |
egg chamber | 7.68e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.