FFCP PHASE1:Mm9::chr7:28902451..28902458,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=273|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:28902451..28902458,+|id=chr7:28902451..28902458,+|ontology_enrichment_celltype=CL:0002563!1.06e-11!9;CL:0002251!1.06e-11!9;CL:0000239!2.15e-10!6;CL:0000677!2.15e-10!6;CL:0000212!2.15e-10!6;CL:0000584!2.15e-10!6;CL:0000473!1.63e-09!3;CL:0000627!1.63e-09!3;CL:0000682!1.63e-09!3;CL:0000075!5.54e-09!7;CL:0000066!5.95e-09!25;CL:0002076!4.23e-07!15|ontology_enrichment_celltype_v019_2=CL:0000239,1.98e-20,6;CL:0000677,1.98e-20,6;CL:0000584,1.98e-20,6;CL:0000075,1.08e-17,7;CL:0002563,4.91e-14,9;CL:0002251,4.91e-14,9;CL:0000066,1.80e-11,25;CL:0000682,7.15e-11,3;CL:0002076,7.04e-09,15;CL:0000223,6.34e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001242!2.07e-17!13;UBERON:0000060!2.07e-17!13;UBERON:0001262!2.07e-17!13;UBERON:0004786!2.07e-17!13;UBERON:0000344!4.69e-15!15;UBERON:0003350!1.06e-11!9;UBERON:0004808!1.06e-11!9;UBERON:0001277!1.06e-11!9;UBERON:0000160!3.57e-11!43;UBERON:0005409!1.03e-09!59;UBERON:0000485!1.29e-09!11;UBERON:0000331!2.17e-09!3;UBERON:0002116!2.17e-09!3;UBERON:0001204!2.17e-09!3;UBERON:0001168!2.17e-09!3;UBERON:0004923!2.71e-09!24|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.91e-14,9;UBERON:0004808,4.91e-14,9;UBERON:0001277,4.91e-14,9;UBERON:0000485,1.07e-11,11;UBERON:0001242,4.49e-10,13;UBERON:0001262,4.49e-10,13;UBERON:0004786,4.49e-10,13;UBERON:0000344,7.04e-09,15|phase1_expression=0,0,0,0.30246421130683,0,2.51818907867835,5.37309073369709,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0.430761996159075,1.07735616342945,0.570070258369122,0.504060259519861,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949058123089023,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:28902451..28902458,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=273 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:28902451..28902458,+ | |||
|id=chr7:28902451..28902458,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.06e-11!9;CL:0002251!1.06e-11!9;CL:0000239!2.15e-10!6;CL:0000677!2.15e-10!6;CL:0000212!2.15e-10!6;CL:0000584!2.15e-10!6;CL:0000473!1.63e-09!3;CL:0000627!1.63e-09!3;CL:0000682!1.63e-09!3;CL:0000075!5.54e-09!7;CL:0000066!5.95e-09!25;CL:0002076!4.23e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.98e-20,6;CL:0000677,1.98e-20,6;CL:0000584,1.98e-20,6;CL:0000075,1.08e-17,7;CL:0002563,4.91e-14,9;CL:0002251,4.91e-14,9;CL:0000066,1.80e-11,25;CL:0000682,7.15e-11,3;CL:0002076,7.04e-09,15;CL:0000223,6.34e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!2.07e-17!13;UBERON:0000060!2.07e-17!13;UBERON:0001262!2.07e-17!13;UBERON:0004786!2.07e-17!13;UBERON:0000344!4.69e-15!15;UBERON:0003350!1.06e-11!9;UBERON:0004808!1.06e-11!9;UBERON:0001277!1.06e-11!9;UBERON:0000160!3.57e-11!43;UBERON:0005409!1.03e-09!59;UBERON:0000485!1.29e-09!11;UBERON:0000331!2.17e-09!3;UBERON:0002116!2.17e-09!3;UBERON:0001204!2.17e-09!3;UBERON:0001168!2.17e-09!3;UBERON:0004923!2.71e-09!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.91e-14,9;UBERON:0004808,4.91e-14,9;UBERON:0001277,4.91e-14,9;UBERON:0000485,1.07e-11,11;UBERON:0001242,4.49e-10,13;UBERON:0001262,4.49e-10,13;UBERON:0004786,4.49e-10,13;UBERON:0000344,7.04e-09,15 | |||
|phase1_expression=0,0,0,0.30246421130683,0,2.51818907867835,5.37309073369709,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0.430761996159075,1.07735616342945,0.570070258369122,0.504060259519861,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949058123089023,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:28902451..28902458,+ | |||
}} |
Revision as of 13:00, 14 September 2013
Short description: | p@chr7:28902451..28902458, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:28902451..28902458, + |
Coexpression cluster: | MCL_coexpression_mm9:273 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.98e-20 | 6 |
gut absorptive cell | 1.98e-20 | 6 |
enterocyte | 1.98e-20 | 6 |
columnar/cuboidal epithelial cell | 1.08e-17 | 7 |
intestinal epithelial cell | 4.91e-14 | 9 |
epithelial cell of alimentary canal | 4.91e-14 | 9 |
epithelial cell | 1.80e-11 | 25 |
M cell of gut | 7.15e-11 | 3 |
endo-epithelial cell | 7.04e-09 | 15 |
endodermal cell | 6.34e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 4.91e-14 | 9 |
gastrointestinal system epithelium | 4.91e-14 | 9 |
intestinal epithelium | 4.91e-14 | 9 |
simple columnar epithelium | 1.07e-11 | 11 |
intestinal mucosa | 4.49e-10 | 13 |
wall of intestine | 4.49e-10 | 13 |
gastrointestinal system mucosa | 4.49e-10 | 13 |
mucosa | 7.04e-09 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.