FFCP PHASE1:Mm9::chr7:51789056..51789061,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:51789056..51789061,+|id=chr7:51789056..51789061,+|ontology_enrichment_celltype=CL:0000473!8.04e-22!3;CL:0000627!8.04e-22!3;CL:0000682!8.04e-22!3;CL:0000239!9.65e-19!6;CL:0000677!9.65e-19!6;CL:0000212!9.65e-19!6;CL:0000584!9.65e-19!6;CL:0000075!4.10e-16!7;CL:0000066!3.23e-13!25;CL:0002563!1.34e-12!9;CL:0002251!1.34e-12!9;CL:0002076!1.19e-07!15|ontology_enrichment_celltype_v019_2=CL:0000682,1.37e-27,3;CL:0000239,8.37e-24,6;CL:0000677,8.37e-24,6;CL:0000584,8.37e-24,6;CL:0000075,1.79e-20,7;CL:0000066,3.49e-17,25;CL:0002563,5.06e-16,9;CL:0002251,5.06e-16,9;CL:0000473,3.13e-12,7;CL:0002076,9.29e-10,15;CL:0000223,2.17e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!8.16e-22!15;UBERON:0001962!2.68e-14!2;UBERON:0001961!2.68e-14!2;UBERON:0001744!2.68e-14!2;UBERON:0004923!1.78e-13!24;UBERON:0001242!2.84e-13!13;UBERON:0000060!2.84e-13!13;UBERON:0001262!2.84e-13!13;UBERON:0004786!2.84e-13!13;UBERON:0003350!1.34e-12!9;UBERON:0004808!1.34e-12!9;UBERON:0001277!1.34e-12!9;UBERON:0000485!2.34e-10!11;UBERON:0002465!7.57e-10!3;UBERON:0003199!6.57e-08!1|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.53e-28,15;UBERON:0001962,6.48e-18,2;UBERON:0001961,6.48e-18,2;UBERON:0001744,6.48e-18,2;UBERON:0004923,1.69e-17,24;UBERON:0001242,5.37e-17,13;UBERON:0001262,5.37e-17,13;UBERON:0004786,5.37e-17,13;UBERON:0003350,5.06e-16,9;UBERON:0004808,5.06e-16,9;UBERON:0001277,5.06e-16,9;UBERON:0000485,3.51e-13,11;UBERON:0002465,2.77e-12,3;UBERON:0003199,1.03e-09,1;UBERON:0000160,3.54e-07,31|phase1_expression=0,1.39590163055744,5.0049916332849,0,0,4.8684988854448,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.37645568640302,2.29692785646008,6.03066794622705,5.817723282519,0,0,1.99557459589774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:51789056..51789061,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:51789056..51789061,+ | |||
|id=chr7:51789056..51789061,+ | |||
|ontology_enrichment_celltype=CL:0000473!8.04e-22!3;CL:0000627!8.04e-22!3;CL:0000682!8.04e-22!3;CL:0000239!9.65e-19!6;CL:0000677!9.65e-19!6;CL:0000212!9.65e-19!6;CL:0000584!9.65e-19!6;CL:0000075!4.10e-16!7;CL:0000066!3.23e-13!25;CL:0002563!1.34e-12!9;CL:0002251!1.34e-12!9;CL:0002076!1.19e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.37e-27,3;CL:0000239,8.37e-24,6;CL:0000677,8.37e-24,6;CL:0000584,8.37e-24,6;CL:0000075,1.79e-20,7;CL:0000066,3.49e-17,25;CL:0002563,5.06e-16,9;CL:0002251,5.06e-16,9;CL:0000473,3.13e-12,7;CL:0002076,9.29e-10,15;CL:0000223,2.17e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.16e-22!15;UBERON:0001962!2.68e-14!2;UBERON:0001961!2.68e-14!2;UBERON:0001744!2.68e-14!2;UBERON:0004923!1.78e-13!24;UBERON:0001242!2.84e-13!13;UBERON:0000060!2.84e-13!13;UBERON:0001262!2.84e-13!13;UBERON:0004786!2.84e-13!13;UBERON:0003350!1.34e-12!9;UBERON:0004808!1.34e-12!9;UBERON:0001277!1.34e-12!9;UBERON:0000485!2.34e-10!11;UBERON:0002465!7.57e-10!3;UBERON:0003199!6.57e-08!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.53e-28,15;UBERON:0001962,6.48e-18,2;UBERON:0001961,6.48e-18,2;UBERON:0001744,6.48e-18,2;UBERON:0004923,1.69e-17,24;UBERON:0001242,5.37e-17,13;UBERON:0001262,5.37e-17,13;UBERON:0004786,5.37e-17,13;UBERON:0003350,5.06e-16,9;UBERON:0004808,5.06e-16,9;UBERON:0001277,5.06e-16,9;UBERON:0000485,3.51e-13,11;UBERON:0002465,2.77e-12,3;UBERON:0003199,1.03e-09,1;UBERON:0000160,3.54e-07,31 | |||
|phase1_expression=0,1.39590163055744,5.0049916332849,0,0,4.8684988854448,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.37645568640302,2.29692785646008,6.03066794622705,5.817723282519,0,0,1.99557459589774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:51789056..51789061,+ | |||
}} |
Revision as of 13:40, 14 September 2013
Short description: | p@chr7:51789056..51789061, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:51789056..51789061, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.37e-27 | 3 |
brush border epithelial cell | 8.37e-24 | 6 |
gut absorptive cell | 8.37e-24 | 6 |
enterocyte | 8.37e-24 | 6 |
columnar/cuboidal epithelial cell | 1.79e-20 | 7 |
epithelial cell | 3.49e-17 | 25 |
intestinal epithelial cell | 5.06e-16 | 9 |
epithelial cell of alimentary canal | 5.06e-16 | 9 |
defensive cell | 3.13e-12 | 7 |
endo-epithelial cell | 9.29e-10 | 15 |
endodermal cell | 2.17e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.53e-28 | 15 |
gut-associated lymphoid tissue | 6.48e-18 | 2 |
mucosa-associated lymphoid tissue | 6.48e-18 | 2 |
lymphoid tissue | 6.48e-18 | 2 |
organ component layer | 1.69e-17 | 24 |
intestinal mucosa | 5.37e-17 | 13 |
wall of intestine | 5.37e-17 | 13 |
gastrointestinal system mucosa | 5.37e-17 | 13 |
epithelium of mucosa | 5.06e-16 | 9 |
gastrointestinal system epithelium | 5.06e-16 | 9 |
intestinal epithelium | 5.06e-16 | 9 |
simple columnar epithelium | 3.51e-13 | 11 |
lymphoid system | 2.77e-12 | 3 |
egg chamber | 1.03e-09 | 1 |
intestine | 3.54e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.