FFCP PHASE1:Mm9::chr8:109079897..109079901,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=72|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:109079897..109079901,+|id=chr8:109079897..109079901,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,4.32e-13,3;CL:0002202,4.32e-13,3;CL:0000069,4.32e-13,3;CL:0002632,4.32e-13,3;CL:0002368,4.32e-13,3;CL:0000307,4.32e-13,3;CL:0000377,4.32e-13,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!4.21e-08!24;UBERON:0005156!5.44e-07!26;UBERON:0000990!5.44e-07!26|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.32e-13,3;UBERON:0001005,4.32e-13,3;UBERON:0007196,4.32e-13,3;UBERON:0001558,4.32e-13,3;UBERON:0003103,1.75e-10,43;UBERON:0001987,1.16e-08,2;UBERON:0003124,1.16e-08,2;UBERON:0004340,1.16e-08,2;UBERON:0006554,6.80e-07,18;UBERON:0003133,8.78e-07,24|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0.218025156380447,0,0,0,0,0,0,0,0,0.286533439938757,1.03134418455488,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,1.42825492201902,0.441737081903227,0,0,0,0,0,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0.711858403995515,0.186399445825301,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,5.19578498426914,5.57391704045217,5.05524445014783,0,0,0,0.520455980298408,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01839363850316,0.248813941220186,1.26361379216837,0,0.390361328888111,0,0.180062129805349,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0.431135985865684,0,0.351902248327898,0.657587197282725,1.39023624612799,0,0.61734640922383,0.59710280045548,0,0,0,0,1.64168241986767,1.80062061461015,0.23674473558521,0.787056926989615,1.07986979021165,0.232533944750408,0,0.233530684734339,0,0,0,0,0,0,0,0.102904612379284,0,0,1.06644125267617,0.464473343720877,0.257734922644187,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0.228497025219458,1.1270773567308,1.83286195060783,0.193952487167626,0.420814919341911,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0.624075346229121,0,0,0,0,0,0.325929952884052,1.01847051465113,0.469380496577004,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24645922567079,0.325773918707152,0,0,0,2.11626489875326,0,0,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0.304464949114599,1.40803024838226,2.1183207086382,0,0.49465875882444,0.807322133479528,0.422190474497091,0.954978752025092,0.164140899745061,0,0,0,0.206386867963223,0,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0.269728692769641,0,0,0.129614973291793,0.621339313086926,0.56369293868419,0,0.827292452285488,0.388902376688095,1.80823752868824,1.68956125490778,0.821500670520278,0.5208175393758,0,0,0.288030006257865,0,1.41907650703115,1.43795340030758,0.25984164595559,0,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0.201652370273681,0,0.0962118416403295,0.116876902181569,0,0.887943813496259,0.807424709485281,2.68615386182526,0,0.563047426353546,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0.952587382566147,0.115884325944855,0.578727661391115,0,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.470546902076653,0.423073039458382,0.73171189149109,0.526139422875686,0.271608227691724,0,0.237270036248348,0.197008964751127,0.818462086339379,0.309873682371932,0,0,0,0,0,0.220591419119515,0|short_description=p@chr8:109079897..109079901,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:109079897..109079901,+ | |||
|id=chr8:109079897..109079901,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,4.32e-13,3;CL:0002202,4.32e-13,3;CL:0000069,4.32e-13,3;CL:0002632,4.32e-13,3;CL:0002368,4.32e-13,3;CL:0000307,4.32e-13,3;CL:0000377,4.32e-13,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!4.21e-08!24;UBERON:0005156!5.44e-07!26;UBERON:0000990!5.44e-07!26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.32e-13,3;UBERON:0001005,4.32e-13,3;UBERON:0007196,4.32e-13,3;UBERON:0001558,4.32e-13,3;UBERON:0003103,1.75e-10,43;UBERON:0001987,1.16e-08,2;UBERON:0003124,1.16e-08,2;UBERON:0004340,1.16e-08,2;UBERON:0006554,6.80e-07,18;UBERON:0003133,8.78e-07,24 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0.218025156380447,0,0,0,0,0,0,0,0,0.286533439938757,1.03134418455488,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,1.42825492201902,0.441737081903227,0,0,0,0,0,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0.711858403995515,0.186399445825301,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,5.19578498426914,5.57391704045217,5.05524445014783,0,0,0,0.520455980298408,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01839363850316,0.248813941220186,1.26361379216837,0,0.390361328888111,0,0.180062129805349,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0.431135985865684,0,0.351902248327898,0.657587197282725,1.39023624612799,0,0.61734640922383,0.59710280045548,0,0,0,0,1.64168241986767,1.80062061461015,0.23674473558521,0.787056926989615,1.07986979021165,0.232533944750408,0,0.233530684734339,0,0,0,0,0,0,0,0.102904612379284,0,0,1.06644125267617,0.464473343720877,0.257734922644187,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0.228497025219458,1.1270773567308,1.83286195060783,0.193952487167626,0.420814919341911,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0.624075346229121,0,0,0,0,0,0.325929952884052,1.01847051465113,0.469380496577004,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24645922567079,0.325773918707152,0,0,0,2.11626489875326,0,0,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0.304464949114599,1.40803024838226,2.1183207086382,0,0.49465875882444,0.807322133479528,0.422190474497091,0.954978752025092,0.164140899745061,0,0,0,0.206386867963223,0,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0.269728692769641,0,0,0.129614973291793,0.621339313086926,0.56369293868419,0,0.827292452285488,0.388902376688095,1.80823752868824,1.68956125490778,0.821500670520278,0.5208175393758,0,0,0.288030006257865,0,1.41907650703115,1.43795340030758,0.25984164595559,0,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0.201652370273681,0,0.0962118416403295,0.116876902181569,0,0.887943813496259,0.807424709485281,2.68615386182526,0,0.563047426353546,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0.952587382566147,0.115884325944855,0.578727661391115,0,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.470546902076653,0.423073039458382,0.73171189149109,0.526139422875686,0.271608227691724,0,0.237270036248348,0.197008964751127,0.818462086339379,0.309873682371932,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr8:109079897..109079901,+ | |||
}} |
Revision as of 14:40, 14 September 2013
Short description: | p@chr8:109079897..109079901, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:109079897..109079901, + |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 4.32e-13 | 3 |
epithelial cell of tracheobronchial tree | 4.32e-13 | 3 |
branched duct epithelial cell | 4.32e-13 | 3 |
epithelial cell of lower respiratory tract | 4.32e-13 | 3 |
respiratory epithelial cell | 4.32e-13 | 3 |
tracheal epithelial cell | 4.32e-13 | 3 |
tracheoblast | 4.32e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 4.32e-13 | 3 |
respiratory airway | 4.32e-13 | 3 |
tracheobronchial tree | 4.32e-13 | 3 |
lower respiratory tract | 4.32e-13 | 3 |
compound organ | 1.75e-10 | 43 |
placenta | 1.16e-08 | 2 |
chorion | 1.16e-08 | 2 |
allantois | 1.16e-08 | 2 |
urinary system structure | 6.80e-07 | 18 |
reproductive organ | 8.78e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.