FFCP PHASE1:Mm9::chr8:32217083..32217090,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=72|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:32217083..32217090,+|id=chr8:32217083..32217090,+|ontology_enrichment_celltype=CL:0000068!2.15e-08!3;CL:0002202!2.15e-08!3;CL:0000069!2.15e-08!3;CL:0002632!2.15e-08!3;CL:0002368!2.15e-08!3;CL:0000307!2.15e-08!3;CL:0000377!2.15e-08!3;CL:0002076!6.15e-07!15|ontology_enrichment_celltype_v019_2=CL:0000068,4.90e-53,3;CL:0002202,4.90e-53,3;CL:0000069,4.90e-53,3;CL:0002632,4.90e-53,3;CL:0002368,4.90e-53,3;CL:0000307,4.90e-53,3;CL:0000377,4.90e-53,3;CL:0000213,1.74e-18,1;CL:0002078,1.74e-18,1;CL:0000115,1.74e-18,1;CL:0002262,1.74e-18,1;CL:1000398,1.74e-18,1;CL:0000223,1.13e-14,20;CL:0000066,7.02e-12,25;CL:0002076,2.29e-11,15;CL:0000215,4.77e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!3.61e-24!17;UBERON:0005181!3.61e-24!17;UBERON:0002224!3.61e-24!17;UBERON:0000915!3.61e-24!17;UBERON:0008947!3.61e-24!17;UBERON:0003258!3.61e-24!17;UBERON:0002048!1.12e-17!14;UBERON:0000117!1.12e-17!14;UBERON:0000171!1.12e-17!14;UBERON:0000170!1.12e-17!14;UBERON:0005597!1.12e-17!14;UBERON:0000118!1.12e-17!14;UBERON:0005153!4.13e-14!17;UBERON:0000065!4.35e-12!41;UBERON:0001004!1.06e-11!42;UBERON:0003126!2.15e-08!3;UBERON:0001005!2.15e-08!3;UBERON:0007196!2.15e-08!3;UBERON:0001558!2.15e-08!3;UBERON:0005157!5.64e-08!27|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.90e-53,3;UBERON:0001005,4.90e-53,3;UBERON:0007196,4.90e-53,3;UBERON:0001558,4.90e-53,3;UBERON:0002394,1.74e-18,1;UBERON:0001281,1.74e-18,1;UBERON:0000353,1.74e-18,1;UBERON:0003497,1.74e-18,1;UBERON:0003909,1.74e-18,1;UBERON:0003928,1.74e-18,1;UBERON:0003835,1.74e-18,1;UBERON:0003513,1.74e-18,1;UBERON:0001280,1.74e-18,1;UBERON:0004647,1.74e-18,1;UBERON:0002294,1.74e-18,1;UBERON:0001173,1.74e-18,1;UBERON:0004912,1.74e-18,1;UBERON:0005171,1.74e-18,1;UBERON:0005178,4.37e-17,17;UBERON:0005181,4.37e-17,17;UBERON:0002224,4.37e-17,17;UBERON:0000915,4.37e-17,17;UBERON:0008947,4.37e-17,17;UBERON:0003258,4.37e-17,17;UBERON:0000065,1.81e-07,41;UBERON:0001004,2.64e-07,42;UBERON:0009569,3.36e-07,66|phase1_expression=0,0,0,0,0,0.671517087647559,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,7.79367747640371,8.36087556067825,6.0662933401774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,0,0.325929952884052,0.169745085775188,0,0.167506257441816,0,0.390267295715598,0.315270288212382,0.221464689648775,0.478364305972461,0.327726629431476,0.863424909329478,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0.656563598980245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.404593039154462,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0.220591419119515,0|short_description=p@chr8:32217083..32217090,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:32217083..32217090,+ | |||
|id=chr8:32217083..32217090,+ | |||
|ontology_enrichment_celltype=CL:0000068!2.15e-08!3;CL:0002202!2.15e-08!3;CL:0000069!2.15e-08!3;CL:0002632!2.15e-08!3;CL:0002368!2.15e-08!3;CL:0000307!2.15e-08!3;CL:0000377!2.15e-08!3;CL:0002076!6.15e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,4.90e-53,3;CL:0002202,4.90e-53,3;CL:0000069,4.90e-53,3;CL:0002632,4.90e-53,3;CL:0002368,4.90e-53,3;CL:0000307,4.90e-53,3;CL:0000377,4.90e-53,3;CL:0000213,1.74e-18,1;CL:0002078,1.74e-18,1;CL:0000115,1.74e-18,1;CL:0002262,1.74e-18,1;CL:1000398,1.74e-18,1;CL:0000223,1.13e-14,20;CL:0000066,7.02e-12,25;CL:0002076,2.29e-11,15;CL:0000215,4.77e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!3.61e-24!17;UBERON:0005181!3.61e-24!17;UBERON:0002224!3.61e-24!17;UBERON:0000915!3.61e-24!17;UBERON:0008947!3.61e-24!17;UBERON:0003258!3.61e-24!17;UBERON:0002048!1.12e-17!14;UBERON:0000117!1.12e-17!14;UBERON:0000171!1.12e-17!14;UBERON:0000170!1.12e-17!14;UBERON:0005597!1.12e-17!14;UBERON:0000118!1.12e-17!14;UBERON:0005153!4.13e-14!17;UBERON:0000065!4.35e-12!41;UBERON:0001004!1.06e-11!42;UBERON:0003126!2.15e-08!3;UBERON:0001005!2.15e-08!3;UBERON:0007196!2.15e-08!3;UBERON:0001558!2.15e-08!3;UBERON:0005157!5.64e-08!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.90e-53,3;UBERON:0001005,4.90e-53,3;UBERON:0007196,4.90e-53,3;UBERON:0001558,4.90e-53,3;UBERON:0002394,1.74e-18,1;UBERON:0001281,1.74e-18,1;UBERON:0000353,1.74e-18,1;UBERON:0003497,1.74e-18,1;UBERON:0003909,1.74e-18,1;UBERON:0003928,1.74e-18,1;UBERON:0003835,1.74e-18,1;UBERON:0003513,1.74e-18,1;UBERON:0001280,1.74e-18,1;UBERON:0004647,1.74e-18,1;UBERON:0002294,1.74e-18,1;UBERON:0001173,1.74e-18,1;UBERON:0004912,1.74e-18,1;UBERON:0005171,1.74e-18,1;UBERON:0005178,4.37e-17,17;UBERON:0005181,4.37e-17,17;UBERON:0002224,4.37e-17,17;UBERON:0000915,4.37e-17,17;UBERON:0008947,4.37e-17,17;UBERON:0003258,4.37e-17,17;UBERON:0000065,1.81e-07,41;UBERON:0001004,2.64e-07,42;UBERON:0009569,3.36e-07,66 | |||
|phase1_expression=0,0,0,0,0,0.671517087647559,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,7.79367747640371,8.36087556067825,6.0662933401774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,0,0.325929952884052,0.169745085775188,0,0.167506257441816,0,0.390267295715598,0.315270288212382,0.221464689648775,0.478364305972461,0.327726629431476,0.863424909329478,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0.656563598980245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.404593039154462,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr8:32217083..32217090,+ | |||
}} |
Revision as of 15:28, 14 September 2013
Short description: | p@chr8:32217083..32217090, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:32217083..32217090, + |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 4.90e-53 | 3 |
epithelial cell of tracheobronchial tree | 4.90e-53 | 3 |
branched duct epithelial cell | 4.90e-53 | 3 |
epithelial cell of lower respiratory tract | 4.90e-53 | 3 |
respiratory epithelial cell | 4.90e-53 | 3 |
tracheal epithelial cell | 4.90e-53 | 3 |
tracheoblast | 4.90e-53 | 3 |
lining cell | 1.74e-18 | 1 |
meso-epithelial cell | 1.74e-18 | 1 |
endothelial cell | 1.74e-18 | 1 |
endothelial cell of sinusoid | 1.74e-18 | 1 |
endothelial cell of hepatic sinusoid | 1.74e-18 | 1 |
endodermal cell | 1.13e-14 | 20 |
epithelial cell | 7.02e-12 | 25 |
endo-epithelial cell | 2.29e-11 | 15 |
barrier cell | 4.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 4.90e-53 | 3 |
respiratory airway | 4.90e-53 | 3 |
tracheobronchial tree | 4.90e-53 | 3 |
lower respiratory tract | 4.90e-53 | 3 |
bile duct | 1.74e-18 | 1 |
hepatic sinusoid | 1.74e-18 | 1 |
parenchyma | 1.74e-18 | 1 |
abdomen blood vessel | 1.74e-18 | 1 |
sinusoid | 1.74e-18 | 1 |
digestive system duct | 1.74e-18 | 1 |
abdominal segment blood vessel | 1.74e-18 | 1 |
trunk blood vessel | 1.74e-18 | 1 |
liver parenchyma | 1.74e-18 | 1 |
liver lobule | 1.74e-18 | 1 |
biliary system | 1.74e-18 | 1 |
biliary tree | 1.74e-18 | 1 |
biliary bud | 1.74e-18 | 1 |
hepatic duct | 1.74e-18 | 1 |
thoracic cavity element | 4.37e-17 | 17 |
thoracic segment organ | 4.37e-17 | 17 |
thoracic cavity | 4.37e-17 | 17 |
thoracic segment of trunk | 4.37e-17 | 17 |
respiratory primordium | 4.37e-17 | 17 |
endoderm of foregut | 4.37e-17 | 17 |
respiratory tract | 1.81e-07 | 41 |
respiratory system | 2.64e-07 | 42 |
subdivision of trunk | 3.36e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.