FFCP PHASE1:Mm9::chr8:5105240..5105254,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20494|HGNC=|MCL_coexpression_id=131|UniProt=P70172,Q0VBB8|association_with_transcript=-8bp_to_ENSMUST00000023835,NM_011388,uc009kub.1_5end|description=CAGE_peak_1_at_Slc10a2_5end|id=chr8:5105240..5105254,-|ontology_enrichment_celltype=CL:0000066!1.88e-10!25;CL:0000239!3.62e-09!6;CL:0000677!3.62e-09!6;CL:0000212!3.62e-09!6;CL:0000584!3.62e-09!6;CL:0000223!2.31e-08!20;CL:0000075!1.06e-07!7;CL:0000181!1.26e-07!5;CL:0000417!1.26e-07!5;CL:0000668!1.26e-07!5;CL:0000412!1.26e-07!5;CL:0000182!1.26e-07!5;CL:0002563!1.82e-07!9;CL:0002251!1.82e-07!9|ontology_enrichment_celltype_v019_2=CL:0000239,1.01e-13,6;CL:0000677,1.01e-13,6;CL:0000584,1.01e-13,6;CL:0000066,1.62e-13,25;CL:0000075,1.16e-11,7;CL:0000223,5.92e-10,20;CL:0002563,6.50e-09,9;CL:0002251,6.50e-09,9;CL:0000682,2.59e-08,3;CL:0000182,8.44e-08,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!6.80e-19!43;UBERON:0000344!2.40e-15!15;UBERON:0005409!6.94e-13!59;UBERON:0001242!1.39e-12!13;UBERON:0000060!1.39e-12!13;UBERON:0001262!1.39e-12!13;UBERON:0004786!1.39e-12!13;UBERON:0004923!3.31e-08!24;UBERON:0001007!8.92e-08!128;UBERON:0001555!8.92e-08!128;UBERON:0007026!8.92e-08!128;UBERON:0004119!1.68e-07!130;UBERON:0000925!1.68e-07!130;UBERON:0006595!1.68e-07!130;UBERON:0003350!1.82e-07!9;UBERON:0004808!1.82e-07!9;UBERON:0001277!1.82e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.63e-35,31;UBERON:0005409,1.11e-23,47;UBERON:0000344,3.59e-18,15;UBERON:0001007,2.88e-14,116;UBERON:0001555,2.88e-14,116;UBERON:0007026,2.88e-14,116;UBERON:0001242,4.85e-14,13;UBERON:0001262,4.85e-14,13;UBERON:0004786,4.85e-14,13;UBERON:0004119,6.64e-14,118;UBERON:0000925,6.64e-14,118;UBERON:0006595,6.64e-14,118;UBERON:0004921,3.75e-12,114;UBERON:0002108,4.60e-11,4;UBERON:0004923,1.92e-10,24;UBERON:0000331,5.59e-09,3;UBERON:0002116,5.59e-09,3;UBERON:0001204,5.59e-09,3;UBERON:0001168,5.59e-09,3;UBERON:0003350,6.50e-09,9;UBERON:0004808,6.50e-09,9;UBERON:0001277,6.50e-09,9;UBERON:0000485,3.65e-07,11|phase1_expression=0,34.1995899486574,39.5849338268896,13.9133537201142,19.5349334679075,2.85394762250213,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,32.1584769814747,69.7404214444197,43.0673973086265,49.9683915544527,26.9339040857361,714.678080575422,120.722432155007,221.287049633994,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,4.30211938490693,137.354209408966,7.01614149129162,9.09686984426737,5.82434953226536,6.74133216632409,0,0,0,0,0,0,0,0,0,0,19.5254434319593,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,67.101034038524,0,0,48.5368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.05780226665418,0,0,0.257734922644187,1.61346819698674,0.889512175379481,1.33157938278791,31.3189180619378,1.31759163779209,3.01602250560323,2.38747766449381,2.14460495831032,39.5480539807857,17.7233200897249,19.3167035056736,0,0,0,0.407302655690628,0.775809948670503,0.49095073923223,0.0632365371242573,0,1.255989822731,0.863780147452604,10.0793893209631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538192240565737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0.566153061577665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1121777274597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,115.227711256404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0,0.192075457214608,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.188218760830661,0,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p1@Slc10a2}} | ||
|EntrezGene=20494 | |||
|HGNC= | |||
|MCL_coexpression_id=131 | |||
|UniProt=P70172,Q0VBB8 | |||
|association_with_transcript=-8bp_to_ENSMUST00000023835,NM_011388,uc009kub.1_5end | |||
|description=CAGE_peak_1_at_Slc10a2_5end | |||
|id=chr8:5105240..5105254,- | |||
|ontology_enrichment_celltype=CL:0000066!1.88e-10!25;CL:0000239!3.62e-09!6;CL:0000677!3.62e-09!6;CL:0000212!3.62e-09!6;CL:0000584!3.62e-09!6;CL:0000223!2.31e-08!20;CL:0000075!1.06e-07!7;CL:0000181!1.26e-07!5;CL:0000417!1.26e-07!5;CL:0000668!1.26e-07!5;CL:0000412!1.26e-07!5;CL:0000182!1.26e-07!5;CL:0002563!1.82e-07!9;CL:0002251!1.82e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.01e-13,6;CL:0000677,1.01e-13,6;CL:0000584,1.01e-13,6;CL:0000066,1.62e-13,25;CL:0000075,1.16e-11,7;CL:0000223,5.92e-10,20;CL:0002563,6.50e-09,9;CL:0002251,6.50e-09,9;CL:0000682,2.59e-08,3;CL:0000182,8.44e-08,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.80e-19!43;UBERON:0000344!2.40e-15!15;UBERON:0005409!6.94e-13!59;UBERON:0001242!1.39e-12!13;UBERON:0000060!1.39e-12!13;UBERON:0001262!1.39e-12!13;UBERON:0004786!1.39e-12!13;UBERON:0004923!3.31e-08!24;UBERON:0001007!8.92e-08!128;UBERON:0001555!8.92e-08!128;UBERON:0007026!8.92e-08!128;UBERON:0004119!1.68e-07!130;UBERON:0000925!1.68e-07!130;UBERON:0006595!1.68e-07!130;UBERON:0003350!1.82e-07!9;UBERON:0004808!1.82e-07!9;UBERON:0001277!1.82e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.63e-35,31;UBERON:0005409,1.11e-23,47;UBERON:0000344,3.59e-18,15;UBERON:0001007,2.88e-14,116;UBERON:0001555,2.88e-14,116;UBERON:0007026,2.88e-14,116;UBERON:0001242,4.85e-14,13;UBERON:0001262,4.85e-14,13;UBERON:0004786,4.85e-14,13;UBERON:0004119,6.64e-14,118;UBERON:0000925,6.64e-14,118;UBERON:0006595,6.64e-14,118;UBERON:0004921,3.75e-12,114;UBERON:0002108,4.60e-11,4;UBERON:0004923,1.92e-10,24;UBERON:0000331,5.59e-09,3;UBERON:0002116,5.59e-09,3;UBERON:0001204,5.59e-09,3;UBERON:0001168,5.59e-09,3;UBERON:0003350,6.50e-09,9;UBERON:0004808,6.50e-09,9;UBERON:0001277,6.50e-09,9;UBERON:0000485,3.65e-07,11 | |||
|phase1_expression=0,34.1995899486574,39.5849338268896,13.9133537201142,19.5349334679075,2.85394762250213,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,32.1584769814747,69.7404214444197,43.0673973086265,49.9683915544527,26.9339040857361,714.678080575422,120.722432155007,221.287049633994,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,4.30211938490693,137.354209408966,7.01614149129162,9.09686984426737,5.82434953226536,6.74133216632409,0,0,0,0,0,0,0,0,0,0,19.5254434319593,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,67.101034038524,0,0,48.5368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.05780226665418,0,0,0.257734922644187,1.61346819698674,0.889512175379481,1.33157938278791,31.3189180619378,1.31759163779209,3.01602250560323,2.38747766449381,2.14460495831032,39.5480539807857,17.7233200897249,19.3167035056736,0,0,0,0.407302655690628,0.775809948670503,0.49095073923223,0.0632365371242573,0,1.255989822731,0.863780147452604,10.0793893209631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538192240565737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0.566153061577665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1121777274597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,115.227711256404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0,0.192075457214608,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.188218760830661,0,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p1@Slc10a2 | |||
}} |
Revision as of 15:46, 14 September 2013
Short description: | p1@Slc10a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc10a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | -8bp_to_ENSMUST00000023835, NM_011388, uc009kub.1_5end |
EntrezGene: | Slc10a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.01e-13 | 6 |
gut absorptive cell | 1.01e-13 | 6 |
enterocyte | 1.01e-13 | 6 |
epithelial cell | 1.62e-13 | 25 |
columnar/cuboidal epithelial cell | 1.16e-11 | 7 |
endodermal cell | 5.92e-10 | 20 |
intestinal epithelial cell | 6.50e-09 | 9 |
epithelial cell of alimentary canal | 6.50e-09 | 9 |
M cell of gut | 2.59e-08 | 3 |
hepatocyte | 8.44e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.63e-35 | 31 |
gastrointestinal system | 1.11e-23 | 47 |
mucosa | 3.59e-18 | 15 |
digestive system | 2.88e-14 | 116 |
digestive tract | 2.88e-14 | 116 |
primitive gut | 2.88e-14 | 116 |
intestinal mucosa | 4.85e-14 | 13 |
wall of intestine | 4.85e-14 | 13 |
gastrointestinal system mucosa | 4.85e-14 | 13 |
endoderm-derived structure | 6.64e-14 | 118 |
endoderm | 6.64e-14 | 118 |
presumptive endoderm | 6.64e-14 | 118 |
subdivision of digestive tract | 3.75e-12 | 114 |
small intestine | 4.60e-11 | 4 |
organ component layer | 1.92e-10 | 24 |
ileal mucosa | 5.59e-09 | 3 |
ileum | 5.59e-09 | 3 |
mucosa of small intestine | 5.59e-09 | 3 |
wall of small intestine | 5.59e-09 | 3 |
epithelium of mucosa | 6.50e-09 | 9 |
gastrointestinal system epithelium | 6.50e-09 | 9 |
intestinal epithelium | 6.50e-09 | 9 |
simple columnar epithelium | 3.65e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.