FFCP PHASE1:Hg19::chr1:65991296..65991320,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3953 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6554 | |||
|TSSclassifier=strong | |||
|UniProt=P48357,Q4G138 | |||
|association_with_transcript=-51bp_to_ENST00000462765,NM_001198687,NM_001198688,NM_001198689_5end | |||
|coexpression_cluster_id=C2597 | |||
|description=CAGE_peak_6_at_LEPR_5end | |||
|id=chr1:65991296..65991320,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002552;1.58e-07;5!CL:0002564;1.58e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,1.45e-07,5;CL:0002564,1.78e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;2.64e-09;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.66e-09,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.18e-34!115;UBERON:0000477!7.35e-10!286;UBERON:0000153!2.01e-09!129;UBERON:0007811!2.01e-09!129;UBERON:0003075!2.51e-09!86;UBERON:0007284!2.51e-09!86;UBERON:0000033!1.49e-08!123;UBERON:0001049!1.58e-08!57;UBERON:0005068!1.58e-08!57;UBERON:0006241!1.58e-08!57;UBERON:0007135!1.58e-08!57;UBERON:0002346!2.29e-08!90;UBERON:0004111!1.34e-07!241;UBERON:0000481!2.26e-07!347;UBERON:0002616!7.20e-07!59;UBERON:0004121!8.90e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;4.08e-11;5!UBERON:0002216;4.08e-11;5!UBERON:0011134;4.08e-11;5!UBERON:0002209;4.08e-11;5!UBERON:0002213;4.08e-11;5!UBERON:0007844;4.08e-11;5!UBERON:0011138;4.08e-11;5!UBERON:0001130;4.08e-11;5!UBERON:0001066;4.08e-11;5!UBERON:0001468;4.08e-11;5!UBERON:0000165;1.15e-10;28!UBERON:0000075;2.31e-09;16!UBERON:0002242;1.58e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.53e-17,114;UBERON:0011135,4.20e-11,5;UBERON:0002216,4.20e-11,5;UBERON:0011134,4.20e-11,5;UBERON:0002209,4.20e-11,5;UBERON:0002213,4.20e-11,5;UBERON:0005856,4.20e-11,5;UBERON:0005866,4.20e-11,5;UBERON:0005863,4.20e-11,5;UBERON:0007844,4.20e-11,5;UBERON:0011138,4.20e-11,5;UBERON:0001130,4.20e-11,5;UBERON:0001066,4.20e-11,5;UBERON:0001468,4.20e-11,5;UBERON:0000165,4.02e-10,29;UBERON:0000930,4.02e-10,29;UBERON:0000075,2.51e-09,16;UBERON:0002242,1.78e-07,3;UBERON:0003068,1.78e-07,3;UBERON:0002328,1.78e-07,3;UBERON:0004880,1.78e-07,3;UBERON:0000166,6.89e-07,22;UBERON:0003978,9.63e-07,3;UBERON:0009751,9.63e-07,3;UBERON:0000946,9.63e-07,3;UBERON:0002523,9.63e-07,3;UBERON:0005983,9.63e-07,3;UBERON:0002165,9.63e-07,3;UBERON:0002062,9.63e-07,3;UBERON:0007280,9.63e-07,3 | |||
|phase1_expression=0,0.642301571672949,0.281908808191942,1.0007329835313,0.893922188854576,0.872338524100369,0,0,1.82829939739887,0,0,0,0,2.59909341216098,7.62213964174206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,0,0,1.15877215168659,0,0,0.378139268656271,0,0.087834785693126,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06729878806013,1.00416183829401,0,0,0,0,0,1.07159673940896,1.34717623575702,1.0135033243499,0,0,0,0,0,0,0,0.506522046658319,0.132409180813219,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0,0.538842688278752,0,0.151357427644931,0,0.468642863667593,0,0,0.597794722207204,0,0,0,4.69554593886255,0,6.92282733877629,9.50402285825643,13.5996811103206,0,0,0,0.250237039743928,2.21651292387346,4.82875382968922,3.0648779579902,13.2209491837805,0.113432183160021,0,0,0.211931901159562,0,0,0.772921620136887,0.558350568994769,0,0,0,0,1.2931684545505,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,6.33775174109154,1.96565443335525,13.5881678536723,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,1.58803092537181,0.925971025153221,4.94660795809955,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,1.47798971368783,0,0.207328115540772,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,5.7430967917057,0,0.434343920002738,2.87666851570537,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,16.9314258572413,7.00238729483548,4.06897535549603,6.44709670745502,4.10386674233472,7.41201350659493,21.5540203586592,1.20378439891088,0,3.10419213877515,0,0,0.521301686808497,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63111851975121,1.0457418040996,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0,0.137836572484531,0.214840489736547,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.487426979262569,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0.379473173765715,0,0,0,0,2.07116361708914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,8.61611792633986,0.270455678475983,0,0,0,2.19762268907841,0,0,0,0.23874448473769,0,0,0,0,0,0,0,2.98871982376605,0.276283915531148,0,0,0,0,0,0,0,1.97286811273867,0,14.4478087188028,1.93866549219044,0.463840490809256,0,0,0,6.52499617891314,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.331737779793674,0,1.75508317723178,0,0,1.53900517007594,0,0,0,0,0,0.457987967009312,0.533034776018635,0,0,3.65665700180344,4.28631755172643,5.68581349521445,2.51732380463764,6.07211944717392,4.60916079043098,0,0,0,0,0,1.14994833854341,0.611030144933625,0,0,0,0.606610196826093,0.802577647298789,0.234264445725339,0,0,0,0,0,0.30607276163049,34.9421785345538,0.60129367765797,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,1.35784623083787,0,4.29363407483012,0,0,0.253243183823515,0,0,2.34798294213288,0,0,0,1.20116498503375,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,3.90995361781156,1.60412296808179,5.74298419661451,0.199679000498991,0,0.669514372325618,0.604651252380536,0.360299883542404,0,0,0,0,0.196854963029498,0,0,0.272406812223151,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0.314727528809989,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,7.88088199193654,0,0,10.2586563574658,30.4765844498109,0.129282956361551,0.13223260174269,0,0,3.09683496446315,3.93010762749165,4.55662960881915,0.992332043623902,0,0,0,2.72008901684737,2.506898940227,0.612691153526923,0.327872630709804,0,0,0,0.250381861413,1.72022758707021,1.44207766997908,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0.757612021100357,2.0125432140206,1.77962244319307,0,0,0,0,0,0,0,0,0,0,0,1.14241563650639,0,0,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.41023272848151,0.252071696221718,0.0691572524642179,0.645902582527404,0,0,0,0,0,0.381382095467167,0,0,3.61009576076435,0,2.34454203369928,0,0,0,0.540300676947157,0,0.206686796501184,0.253663240775627,0.546974809018219,1.09651553371436,3.96968942711435,0,0,2.67850917939143,1.68141861109412,2.42786241694653,0.227662191351298,0.266107110487916,0,0.171488009437418,0.475788130837822,0.197318320688547,0,0,1.02041020705668,0,0,0,0,0,3.4308741204795,0,0,0,0,0,1.3657478167516,3.45629830907046,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.821302454849976,0,0,0,0,0,0,0,2.2644426535001,0.385870790539723,0.218559560503957,0,0.980593287015622,0,1.76677620403451,0.891139200981258,1.6906229103336,0.8496355734390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| |||
|short_description=p6@LEPR | |||
}} |
Revision as of 18:54, 10 January 2014
Short description: | p6@LEPR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LEPR_5end |
Coexpression cluster: | C2597_liver_dura_Olfactory_Nucleus_bone_Fibroblast_Hepatocyte |
Association with transcript: | -51bp_to_ENST00000462765, NM_001198687, NM_001198688, NM_001198689_5end |
EntrezGene: | LEPR |
HGNC: | 6554 |
UniProt: | P48357Q4G138 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 1.45e-07 | 5 |
nucleus pulposus cell of intervertebral disc | 1.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.53e-17 | 114 |
intervertebral cartilage | 4.20e-11 | 5 |
symphysis | 4.20e-11 | 5 |
nonsynovial joint | 4.20e-11 | 5 |
fibrous joint | 4.20e-11 | 5 |
cartilaginous joint | 4.20e-11 | 5 |
developing mesenchymal condensation | 4.20e-11 | 5 |
pre-cartilage condensation | 4.20e-11 | 5 |
cartilaginous condensation | 4.20e-11 | 5 |
cartilage element | 4.20e-11 | 5 |
post-cranial axial skeletal system | 4.20e-11 | 5 |
vertebral column | 4.20e-11 | 5 |
intervertebral disk | 4.20e-11 | 5 |
intervertebral joint | 4.20e-11 | 5 |
mouth | 4.02e-10 | 29 |
stomodeum | 4.02e-10 | 29 |
subdivision of skeletal system | 2.51e-09 | 16 |
nucleus pulposus | 1.78e-07 | 3 |
axial mesoderm | 1.78e-07 | 3 |
notochord | 1.78e-07 | 3 |
chordamesoderm | 1.78e-07 | 3 |
oral opening | 6.89e-07 | 22 |
valve | 9.63e-07 | 3 |
cardiac mesenchyme | 9.63e-07 | 3 |
cardial valve | 9.63e-07 | 3 |
tunica intima | 9.63e-07 | 3 |
heart layer | 9.63e-07 | 3 |
endocardium | 9.63e-07 | 3 |
endocardial cushion | 9.63e-07 | 3 |
presumptive endocardium | 9.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.66e-09 | 8 |