FFCP PHASE1:Hg19::chr1:174128704..174128727,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9910 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24663 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000457696_5end | |||
|description=CAGE_peak_8_at_RABGAP1L_5end | |||
|id=chr1:174128704..174128727,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.77e-23!140;CL:0000037!2.61e-23!172;CL:0000566!2.61e-23!172;CL:0000988!5.95e-22!182;CL:0002032!1.32e-21!165;CL:0000837!1.32e-21!165;CL:0002031!2.24e-19!124;CL:0002087!8.84e-18!119;CL:0000542!4.97e-17!53;CL:0000051!4.97e-17!53;CL:0000838!1.48e-16!52;CL:0000084!2.66e-08!25;CL:0000827!2.66e-08!25;CL:0000791!5.11e-08!18;CL:0000789!5.11e-08!18;CL:0002420!5.11e-08!18;CL:0002419!5.11e-08!18;CL:0000790!5.11e-08!18;CL:0000945!5.96e-08!24;CL:0000826!5.96e-08!24;CL:0000236!9.88e-08!14;CL:0000763!1.10e-07!112;CL:0000049!1.10e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000542;7.57e-14;53!CL:0000945;1.66e-10;24!CL:0000084;2.44e-10;25!CL:0000791;8.48e-10;18!CL:0000789;8.48e-10;18!CL:0002419;8.48e-10;18!CL:0000236;6.30e-09;13!CL:0000625;5.28e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.50e-25,136;CL:0000037,7.02e-24,168;CL:0000988,8.18e-24,177;CL:0000542,3.25e-23,53;CL:0000051,3.25e-23,53;CL:0002032,4.64e-23,161;CL:0000837,4.64e-23,161;CL:0000838,1.52e-22,52;CL:0002031,9.41e-21,120;CL:0002087,1.61e-18,115;CL:0000945,6.10e-11,24;CL:0000826,6.10e-11,24;CL:0000084,1.54e-10,25;CL:0000827,1.54e-10,25;CL:0000791,4.01e-10,18;CL:0000789,4.01e-10,18;CL:0002420,4.01e-10,18;CL:0002419,4.01e-10,18;CL:0000790,4.01e-10,18;CL:0000236,4.89e-10,14;CL:0000625,4.63e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000051;7.57e-14;53!CL:0000790;8.48e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.39e-13!115;UBERON:0002390!4.67e-10!102;UBERON:0003061!4.67e-10!102;UBERON:0002193!1.31e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.84e-12,114;UBERON:0002390,1.25e-08,98;UBERON:0003061,1.25e-08,98;UBERON:0002193,4.19e-07,108 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.331397375727916,0.672325146451775,0,0,0.975865597581014,0.123121058076788,0.204000691244253,0,0.286235987131057,0.684372125364421,0.376627918784408,0.152826811495903,0,0.157421562627358,1.96682138424452,4.22212337906934,1.23852898652861,0,0.30120591877825,0,6.66217924990594,16.4916309685409,0.880801318004542,0.553995408531877,0.802177789880567,0.868043482863407,0.447830948479849,1.29557466407592,1.80302897343931,0.581592955118259,3.02300754951048,0.485168122375632,0.464858073811369,1.6446715520873,3.09706370895104,1.43846196161075,2.56160706529101,0.945928919554341,2.06847408441971,0.645484683583826,0,1.50593871634084,1.91034305040492,1.12361742222542,0.612167784741805,2.88836124368484,1.91801137739712,0.659702600373432,0.598390972864896,0,0.290209238628584,0.56738522469114,1.24564449799115,0.251248665256743,2.60741459210101,2.82345498116652,0.605399502633369,1.84138817993782,1.58231193720442,0.845021145247767,1.4882300997553,0.628975936525128,0.561643155732475,0.750884464207532,0.964353520182481,1.14005097496499,1.19350006319454,0.91332076882317,1.75996244461323,3.82297027883492,4.44754626931777,7.25441378363062,7.60752375368424,11.4950487990897,5.2883589822789,3.81621501814146,3.98449078376614,6.45960908308033,3.05818582500183,0,2.24203425192614,1.31692042387539,3.14735632182133,3.14408610199332,1.85041349099558,0.334372990781356,0.651844533267181,0.946895611469467,0,3.23090324967003,2.06224135232386,1.77227115666897,1.62482318259009,1.0247305578054,1.43065282315866,0.822189523018381,1.10540007114339,0.869409257205157,0.889719378972363,1.33770414044857,0,3.62589896632212,1.53288197440768,4.81078423675682,4.30133476433155,1.27426165729639,4.55758417699493,1.90090408889675,3.16207750063323,2.8157054453972,1.24930726552346,3.55165878066025,2.46338399076314,4.03213486449465,4.27904313253612,4.05508330871837,0,0.670700859703636,0.255725123687061,0.361439152384566,0,0.289693037921647,0,0,1.13441780596881,0.443458794925128,0.87834785693126,1.17881167947941,0,0,0.649094787309367,1.39303789839414,0.531831842075461,2.62339686735876,1.71598473234038,4.08603251462521,0,0,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0,0.367663080345869,0,0.625098097988558,0,0.675668882899933,0,0,0.183201743930407,1.31780417436063,3.87780264148325,0,0.993943903390637,0.633152558322899,1.98613771219828,1.14734648299525,0.354668382198357,0.560677600142307,0,0.24666754841716,0.622422070799533,0.404132016209064,0.490385709340376,0.605429710579726,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0.161872944368132,0.421352420106746,0.61246251376468,0.245668634623536,0.103325781175765,0,0.494533858557114,0,0,0.336672227908132,0.250237039743928,0,0,0,0.150238058906597,0.567160915800105,1.4351170855109,0.427114777637135,0,0,0.309157587715317,1.28820270022815,0.558350568994769,0.843881661206331,0.194874010322397,2.27190396819703,0.460249493211497,0.646584227275248,0.710019185033229,0.705264687593482,0.169560592310488,1.54608682530637,2.18196896472668,1.72082757233402,0.365921118388786,1.19276791489337,0.464775771478074,0.829288440122964,1.00928340350251,0.72995471815166,0,0.643240938192885,0,0.464367928031979,0,1.41968160047813,1.34867752062481,1.68707720918437,1.65440959098591,1.74303555273925,0.71181185733329,1.21348177344148,0.588664395376038,2.30848294167834,0,0,0.8231480226628,0,1.26755034821831,0,0.590789906681404,0.882926198829301,0.860919069801795,0.343135620597051,0.548751427043128,1.1240175325762,0.100528972411631,0.185176890317059,0.325808305310325,0,0,0,1.05667824812239,0,0,0,0.790204397959275,0,0.738651018262192,1.17002132569619,2.0808362720422,4.68669169933885,0.671928512795438,1.55952606966625,0.626909658919938,0,0,2.95597942737566,0.616339038092582,1.65862492432618,2.01767934783746,1.00993946741104,0.253991577168676,0.381988425558278,0,0,0.205654985406647,0,0.571652865261156,0,0,0.07333828582095,0.517086863031111,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0.602878754119172,0,0.299918973546171,0,0,0,0.479249710983165,0,0,1.01346914667305,0.410952645100767,0.358121926479791,1.68127715990291,6.5020150866636,4.9594342217689,4.49200626979119,0,0,0,0.335032530668698,0.637938751653163,2.24702107184155,0,1.24324654030811,0,0.500170521059677,0.271265023699736,0.207970861530807,0.356857977594324,0,0.585707074963566,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0.868836144680828,0.391602314925481,0,2.06768026122887,0.862856803274467,1.921096040462,0,0,0,0.496215615637554,1.99500565274481,0.280660094433074,0.256278298511402,0,0.321707842287215,0,0.154209693802656,0,0.246381468041427,0.519254429183621,0.232420756919918,1.32945394550784,0.802025881213139,0.184161977871793,0.459257792658427,0.182091168006717,0.393373244878272,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0.27094643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| |||
|short_description=p8@RABGAP1L | |||
}} |
Revision as of 22:22, 10 January 2014
Short description: | p8@RABGAP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RABGAP1L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000457696_5end |
EntrezGene: | RABGAP1L |
HGNC: | 24663 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.50e-25 | 136 |
hematopoietic stem cell | 7.02e-24 | 168 |
hematopoietic cell | 8.18e-24 | 177 |
lymphocyte | 3.25e-23 | 53 |
common lymphoid progenitor | 3.25e-23 | 53 |
hematopoietic oligopotent progenitor cell | 4.64e-23 | 161 |
hematopoietic multipotent progenitor cell | 4.64e-23 | 161 |
lymphoid lineage restricted progenitor cell | 1.52e-22 | 52 |
hematopoietic lineage restricted progenitor cell | 9.41e-21 | 120 |
nongranular leukocyte | 1.61e-18 | 115 |
lymphocyte of B lineage | 6.10e-11 | 24 |
pro-B cell | 6.10e-11 | 24 |
T cell | 1.54e-10 | 25 |
pro-T cell | 1.54e-10 | 25 |
mature alpha-beta T cell | 4.01e-10 | 18 |
alpha-beta T cell | 4.01e-10 | 18 |
immature T cell | 4.01e-10 | 18 |
mature T cell | 4.01e-10 | 18 |
immature alpha-beta T cell | 4.01e-10 | 18 |
B cell | 4.89e-10 | 14 |
CD8-positive, alpha-beta T cell | 4.63e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.84e-12 | 114 |
hematopoietic system | 1.25e-08 | 98 |
blood island | 1.25e-08 | 98 |
hemolymphoid system | 4.19e-07 | 108 |