FFCP PHASE1:Hg19::chr1:214160884..214160892,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C931 | |||
|description=CAGE_peak_at_chr1:214160884..214160892,- | |||
|id=chr1:214160884..214160892,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002144;7.25e-08;3!CL:0000182;1.44e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,7.76e-08,3;CL:0000182,1.57e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.54e-21;1!UBERON:0003056;5.36e-08;3 | |||
|ontology_enrichment_disease=DOID:171!6.70e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;5.04e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.36e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0002346!3.85e-12!90;UBERON:0007023!8.72e-12!115;UBERON:0000955!1.81e-10!69;UBERON:0006238!1.81e-10!69;UBERON:0002616!4.36e-10!59;UBERON:0000073!4.49e-10!94;UBERON:0001016!4.49e-10!94;UBERON:0003075!6.59e-10!86;UBERON:0007284!6.59e-10!86;UBERON:0001049!1.47e-09!57;UBERON:0005068!1.47e-09!57;UBERON:0006241!1.47e-09!57;UBERON:0007135!1.47e-09!57;UBERON:0005743!6.51e-09!86;UBERON:0001017!8.77e-09!82;UBERON:0000924!3.50e-08!173;UBERON:0006601!3.50e-08!173;UBERON:0002619!1.79e-07!22;UBERON:0002780!2.13e-07!41;UBERON:0001890!2.13e-07!41;UBERON:0006240!2.13e-07!41;UBERON:0003080!3.86e-07!42;UBERON:0001893!4.47e-07!34;UBERON:0000033!5.65e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.54e-21;1!UBERON:0001785;2.54e-21;1!UBERON:0002464;2.54e-21;1!UBERON:0004904;2.54e-21;1!UBERON:0001021;2.54e-21;1!UBERON:0002346;4.45e-21;4!UBERON:0000923;4.45e-21;4!UBERON:0010316;4.45e-21;4!UBERON:0005291;4.45e-21;4!UBERON:0002134;6.31e-21;1!UBERON:0005208;6.31e-21;1!UBERON:0004145;6.31e-21;1!UBERON:0005946;6.31e-21;1!UBERON:0005965;6.31e-21;1!UBERON:0002078;6.31e-21;1!UBERON:0002050;4.46e-17;5!UBERON:0005423;4.46e-17;5!UBERON:0003714;2.35e-11;2!UBERON:0005162;2.35e-11;2!UBERON:0000122;2.35e-11;2!UBERON:0002081;3.70e-11;2!UBERON:0002133;3.70e-11;2!UBERON:0003978;7.25e-08;3!UBERON:0010523;7.25e-08;3!UBERON:0004151;7.25e-08;3!UBERON:0000946;7.25e-08;3!UBERON:0001915;7.25e-08;3!UBERON:0001982;7.25e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.30e-21,1;UBERON:0001785,2.30e-21,1;UBERON:0002464,2.30e-21,1;UBERON:0004904,2.30e-21,1;UBERON:0001021,2.30e-21,1;UBERON:0003902,2.30e-21,1;UBERON:0005425,2.30e-21,1;UBERON:0002134,5.16e-21,1;UBERON:0005208,5.16e-21,1;UBERON:0005946,5.16e-21,1;UBERON:0005965,5.16e-21,1;UBERON:0002078,5.16e-21,1;UBERON:0003714,2.23e-11,2;UBERON:0005162,2.23e-11,2;UBERON:0000122,2.23e-11,2;UBERON:0002081,3.35e-11,2;UBERON:0002133,3.35e-11,2;UBERON:0010227,3.35e-11,2;UBERON:0003978,6.78e-08,3;UBERON:0009751,6.78e-08,3;UBERON:0004151,6.78e-08,3;UBERON:0000946,6.78e-08,3;UBERON:0002523,6.78e-08,3;UBERON:0005983,6.78e-08,3;UBERON:0004145,6.78e-08,3;UBERON:0002165,6.78e-08,3;UBERON:0002062,6.78e-08,3;UBERON:0007280,6.78e-08,3;UBERON:0010523,7.76e-08,3;UBERON:0001915,7.76e-08,3;UBERON:0001982,7.76e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20848795132744,0,0.488124115096339,0.367663080345869,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,1.18157981336281,0,0.122988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0,0,0.251932747854276,0.511343412510774,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.593042257361244,0.617819694732514,0.626531697032732,0.269604531922708,0,0,0,0.19566461893209,0,0.394584402849391,1.20990716048664,0,0,0,0.414752765588989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0.19980960958213,0,0,0.514784993585894,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0.458320848023367,1.43574604915363,0,0,0,0,0,0,0.472699093843342,0.412079291905832,0.471824806979294,0.196854963029498,0,0.795229689809303,0,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0.110929051536852,0.0620964029413835,0.138348634936231,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,0,0,0.218419276384028,0,4.46407332213534,0.123935764259002,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,2.85538840518309,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.135075169236789,0,0.413373593002368,0.0634158101939068,0,0,0.496211178389294,2.28632617667507,0,0,0,0,0,0,0.115233987555779,0,0.271878931907327,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,1.87151570769685,2.98426162742052,0,0.22589216407792,0.219881033490858,0.452888530700021,0.0771741581079447,0,0.940634592723046,0,0.235676547101626,0,0,0,0,0,0.128915775947154,0,0,0,0.0802413666891683,0,0,0,0.157771562193185,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0.253397002022874,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0.12729431655633,0.808468755832877,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p@chr1:214160884..214160892,- | |||
}} |
Revision as of 00:09, 11 January 2014
Short description: | p@chr1:214160884..214160892, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:214160884..214160892, - |
Coexpression cluster: | C931_neuroectodermal_peripheral_maxillary_gastrointestinal_Hepatocyte_small_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 7.76e-08 | 3 |
hepatocyte | 1.57e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.30e-21 | 1 |
cranial nerve | 2.30e-21 | 1 |
nerve trunk | 2.30e-21 | 1 |
nerve connecting eye with brain | 2.30e-21 | 1 |
nerve | 2.30e-21 | 1 |
retinal neural layer | 2.30e-21 | 1 |
presumptive neural retina | 2.30e-21 | 1 |
tricuspid valve | 5.16e-21 | 1 |
right atrium valve | 5.16e-21 | 1 |
outflow tract of atrium | 5.16e-21 | 1 |
outflow part of right atrium | 5.16e-21 | 1 |
right cardiac atrium | 5.16e-21 | 1 |
neural tissue | 2.23e-11 | 2 |
multi cell component structure | 2.23e-11 | 2 |
neuron projection bundle | 2.23e-11 | 2 |
cardiac atrium | 3.35e-11 | 2 |
atrioventricular valve | 3.35e-11 | 2 |
future cardiac atrium | 3.35e-11 | 2 |
valve | 6.78e-08 | 3 |
cardiac mesenchyme | 6.78e-08 | 3 |
cardiac chamber | 6.78e-08 | 3 |
cardial valve | 6.78e-08 | 3 |
tunica intima | 6.78e-08 | 3 |
heart layer | 6.78e-08 | 3 |
outflow tract | 6.78e-08 | 3 |
endocardium | 6.78e-08 | 3 |
endocardial cushion | 6.78e-08 | 3 |
presumptive endocardium | 6.78e-08 | 3 |
microcirculatory vessel | 7.76e-08 | 3 |
endothelium of capillary | 7.76e-08 | 3 |
capillary | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.36e-09 | 10 |