FFCP PHASE1:Hg19::chr1:226321068..226321097,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_at_chr1:226321068..226321097,+ | |||
|id=chr1:226321068..226321097,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.10e-14;1!UBERON:0008947;1.47e-11;29!UBERON:0007297;5.01e-08;2!UBERON:0006965;7.52e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.20e-23!115;UBERON:0002298!1.42e-13!8;UBERON:0001896!1.58e-10!3;UBERON:0005290!1.58e-10!3;UBERON:0010096!1.58e-10!3;UBERON:0000988!1.57e-09!3;UBERON:0004733!8.18e-09!12;UBERON:0002028!8.18e-09!12;UBERON:0007277!8.18e-09!12;UBERON:0004732!4.42e-08!13;UBERON:0003127!4.48e-08!2;UBERON:0000341!4.48e-08!2;UBERON:0001954!3.04e-07!2;UBERON:0003022!3.04e-07!2;UBERON:0002421!3.04e-07!2;UBERON:0002600!3.04e-07!2;UBERON:0000007!3.23e-07!2;UBERON:0002148!3.67e-07!2;UBERON:0009662!3.67e-07!2;UBERON:0003076!6.55e-07!15;UBERON:0003057!6.55e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;5.41e-28;2!UBERON:0000341;7.10e-28;2!UBERON:0001301;9.36e-15;1!UBERON:0002171;9.36e-15;1!UBERON:0006518;9.36e-15;1!UBERON:0008949;9.36e-15;1!UBERON:0000101;9.36e-15;1!UBERON:0002167;9.36e-15;1!UBERON:0002372;2.10e-14;1!UBERON:0001961;2.10e-14;1!UBERON:0001744;2.10e-14;1!UBERON:0001042;2.10e-14;1!UBERON:0001735;2.10e-14;1!UBERON:0005178;2.25e-11;34!UBERON:0002224;2.25e-11;34!UBERON:0005181;1.96e-10;35!UBERON:0000974;5.94e-10;6!UBERON:0003126;1.09e-08;7!UBERON:0001005;1.09e-08;7!UBERON:0001954;7.52e-08;2!UBERON:0006562;7.52e-08;2!UBERON:0003022;7.52e-08;2!UBERON:0002421;7.52e-08;2!UBERON:0002600;7.52e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,6.20e-28,2;UBERON:0000341,6.20e-28,2;UBERON:0001301,7.13e-15,1;UBERON:0002171,9.36e-15,1;UBERON:0006518,9.36e-15,1;UBERON:0008949,9.36e-15,1;UBERON:0000101,9.36e-15,1;UBERON:0002167,9.36e-15,1;UBERON:0002372,2.11e-14,1;UBERON:0001961,2.11e-14,1;UBERON:0001744,2.11e-14,1;UBERON:0001735,2.11e-14,1;UBERON:0005178,7.56e-14,34;UBERON:0002224,7.56e-14,34;UBERON:0005181,1.91e-13,35;UBERON:0007023,8.62e-13,114;UBERON:0000915,6.01e-09,52;UBERON:0008947,8.17e-09,38;UBERON:0003258,8.17e-09,38;UBERON:0003126,1.13e-08,7;UBERON:0001005,1.13e-08,7;UBERON:0000065,1.29e-08,54;UBERON:0001954,7.03e-08,2;UBERON:0003022,7.03e-08,2;UBERON:0002421,7.03e-08,2;UBERON:0002600,7.03e-08,2;UBERON:0001041,6.10e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.71623345421307,0,1.22864280839693,0,0,0,0,0,1.79323189425963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.539209063845416,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62090002363045,0,0,0,0,1.26085721434945,0,0.225980740780532,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,1.70859860108311,4.55892484789031,2.48543433208317,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,2.29363678276028,0.998361463831671,0.248385611765534,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27857558193737,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0.606965604236632,0.227662191351298,0,0,0,0.0679697329768317,0,0,0,0.470958557103084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.4582137370881,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,2.55880778281177,3.09483760902862,0,0,0,0,0,0.870866991587845,0.342233301085281,1.41439311330634,11.7624416843989,2.32862249582209,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p@chr1:226321068..226321097,+ | |||
}} |
Revision as of 00:28, 11 January 2014
Short description: | p@chr1:226321068..226321097, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:226321068..226321097, + |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 6.20e-28 | 2 |
throat | 6.20e-28 | 2 |
epididymis | 7.13e-15 | 1 |
lower lobe of right lung | 9.36e-15 | 1 |
right lung lobe | 9.36e-15 | 1 |
lower lobe of lung | 9.36e-15 | 1 |
lobe of lung | 9.36e-15 | 1 |
right lung | 9.36e-15 | 1 |
tonsil | 2.11e-14 | 1 |
mucosa-associated lymphoid tissue | 2.11e-14 | 1 |
lymphoid tissue | 2.11e-14 | 1 |
tonsillar ring | 2.11e-14 | 1 |
thoracic cavity element | 7.56e-14 | 34 |
thoracic cavity | 7.56e-14 | 34 |
thoracic segment organ | 1.91e-13 | 35 |
adult organism | 8.62e-13 | 114 |
thoracic segment of trunk | 6.01e-09 | 52 |
respiratory primordium | 8.17e-09 | 38 |
endoderm of foregut | 8.17e-09 | 38 |
trachea | 1.13e-08 | 7 |
respiratory airway | 1.13e-08 | 7 |
respiratory tract | 1.29e-08 | 54 |
Ammon's horn | 7.03e-08 | 2 |
lobe parts of cerebral cortex | 7.03e-08 | 2 |
hippocampal formation | 7.03e-08 | 2 |
limbic lobe | 7.03e-08 | 2 |
foregut | 6.10e-07 | 87 |