FFCP PHASE1:Hg19::chr1:239550243..239550304,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1131 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1952 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=23bp_to_ENST00000492335_5end | |||
|coexpression_cluster_id=C1067 | |||
|description=CAGE_peak_3_at_CHRM3_5end | |||
|id=chr1:239550243..239550304,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.89e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.58e-43!115;UBERON:0001017!2.46e-32!82;UBERON:0005743!1.65e-31!86;UBERON:0000955!1.67e-28!69;UBERON:0006238!1.67e-28!69;UBERON:0000073!4.55e-28!94;UBERON:0001016!4.55e-28!94;UBERON:0002780!2.10e-27!41;UBERON:0001890!2.10e-27!41;UBERON:0006240!2.10e-27!41;UBERON:0002619!7.33e-27!22;UBERON:0003080!1.79e-26!42;UBERON:0001049!3.12e-26!57;UBERON:0005068!3.12e-26!57;UBERON:0006241!3.12e-26!57;UBERON:0007135!3.12e-26!57;UBERON:0001893!4.75e-25!34;UBERON:0002020!7.68e-25!34;UBERON:0003528!7.68e-25!34;UBERON:0001950!1.41e-24!20;UBERON:0002791!8.43e-24!33;UBERON:0001869!1.21e-23!32;UBERON:0002616!1.80e-23!59;UBERON:0000956!9.49e-23!25;UBERON:0000203!9.49e-23!25;UBERON:0003075!6.44e-22!86;UBERON:0007284!6.44e-22!86;UBERON:0002346!3.18e-20!90;UBERON:0003056!3.15e-19!61;UBERON:0000153!6.08e-19!129;UBERON:0007811!6.08e-19!129;UBERON:0000033!3.62e-18!123;UBERON:0004121!5.85e-17!169;UBERON:0000924!4.35e-16!173;UBERON:0006601!4.35e-16!173;UBERON:0000475!4.84e-10!365;UBERON:0000468!6.12e-10!659;UBERON:0000062!6.93e-10!511;UBERON:0000922!2.26e-09!612;UBERON:0000200!3.34e-09!6;UBERON:0000481!6.59e-09!347;UBERON:0000467!1.42e-08!625;UBERON:0000480!1.69e-08!626;UBERON:0001871!1.98e-08!7;UBERON:0002021!8.10e-08!5;UBERON:0002050!8.83e-08!605;UBERON:0005423!8.83e-08!605;UBERON:0001872!1.04e-07!5;UBERON:0000349!1.81e-07!5;UBERON:0000923!1.84e-07!604;UBERON:0005291!1.84e-07!604;UBERON:0006598!1.84e-07!604;UBERON:0002532!1.84e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.81e-63;22!UBERON:0001950;2.20e-57;20!UBERON:0000956;7.29e-55;25!UBERON:0000203;7.29e-55;25!UBERON:0001869;3.18e-45;32!UBERON:0001893;5.68e-41;34!UBERON:0002791;9.53e-41;32!UBERON:0003528;6.76e-38;34!UBERON:0002020;6.76e-38;34!UBERON:0002780;4.55e-29;41!UBERON:0001890;4.55e-29;41!UBERON:0000073;9.00e-21;53!UBERON:0002616;9.00e-21;53!UBERON:0000200;8.77e-20;6!UBERON:0001017;1.36e-16;75!UBERON:0002021;1.70e-16;5!UBERON:0001872;3.87e-16;5!UBERON:0001871;7.88e-16;6!UBERON:0000349;1.54e-15;5!UBERON:0000955;2.41e-15;68!UBERON:0001016;2.08e-13;83!UBERON:0007023;1.71e-11;114!UBERON:0001870;5.99e-11;3!UBERON:0011216;1.04e-08;132!UBERON:0001829;7.86e-08;2!UBERON:0002702;1.06e-07;2!UBERON:0002771;1.89e-07;2!UBERON:0001876;3.39e-07;2!UBERON:0001954;5.31e-07;2!UBERON:0003022;5.31e-07;2!UBERON:0002421;5.31e-07;2!UBERON:0002600;5.31e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.60e-63,22;UBERON:0001950,1.51e-57,20;UBERON:0000956,4.58e-55,25;UBERON:0000203,4.58e-55,25;UBERON:0001869,6.81e-51,32;UBERON:0001893,1.35e-47,34;UBERON:0002791,2.70e-46,32;UBERON:0003528,2.81e-43,34;UBERON:0002020,2.81e-43,34;UBERON:0002780,6.45e-42,41;UBERON:0001890,6.45e-42,41;UBERON:0003080,6.45e-42,41;UBERON:0006240,6.45e-42,41;UBERON:0007023,1.35e-39,114;UBERON:0000073,1.76e-36,53;UBERON:0002616,1.76e-36,53;UBERON:0000955,4.76e-36,68;UBERON:0006238,4.76e-36,68;UBERON:0001017,9.23e-36,81;UBERON:0001049,3.64e-34,56;UBERON:0005068,3.64e-34,56;UBERON:0006241,3.64e-34,56;UBERON:0007135,3.64e-34,56;UBERON:0001016,2.16e-33,89;UBERON:0003056,1.74e-28,61;UBERON:0003075,8.21e-25,82;UBERON:0007284,8.21e-25,82;UBERON:0002346,2.60e-23,86;UBERON:0011216,5.15e-23,223;UBERON:0004121,2.02e-20,171;UBERON:0000924,2.02e-20,171;UBERON:0006601,2.02e-20,171;UBERON:0000200,8.40e-20,6;UBERON:0010371,1.88e-19,104;UBERON:0002021,1.68e-16,5;UBERON:0001872,3.06e-16,5;UBERON:0001871,6.40e-16,6;UBERON:0000349,1.14e-15,5;UBERON:0010314,8.35e-14,132;UBERON:0001870,6.41e-11,3;UBERON:0004111,6.56e-09,240;UBERON:0001829,8.69e-08,2;UBERON:0002702,1.13e-07,2;UBERON:0002771,1.66e-07,2;UBERON:0001876,2.68e-07,2;UBERON:0001954,4.56e-07,2;UBERON:0003022,4.56e-07,2;UBERON:0002421,4.56e-07,2;UBERON:0002600,4.56e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,1.37528029272598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0,0,0.252433774244115,0,0.646584227275248,0,0,0,0,0,0,0.365921118388786,0.265059536642971,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55126058909333,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,2.27407504055985,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0.290012154876366,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0.423347165447766,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,8.94732882989668,1.54736358051564,0,0,0,0.19924798825107,0.828851746593443,0,0.613612095012929,0,0.311039587661807,0,0.179021174675609,0,4.73488347057281,0,0,7.75466196876175,8.34912883456661,5.98841394003583,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,10.5304990633907,0,0.139423744278603,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.973033209536731,1.22206028986725,0.593042257361244,0.494255755786011,0.313265848516366,0.471807930864739,0,0.937057782901357,0,1.76098157038881,0,8.2862724598372,0,1.22429104652196,0.821425535170343,0.300646838828985,0,0,0.330991955875499,0,0,0,0.277349346026277,0,0,0,0.34945333648406,0,0,0,0,1.45483524732629,2.02989091390451,0.677942222341597,0,0,17.0939149080872,0.195551382734803,0,0.213452994739353,0,0,0.114536596165916,0.171594997861965,0,0,0,0.271808412147228,1.04602846312333,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,1.43574604915363,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,4.77137813885582,1.49823746722733,0.321506296930038,0.412618309791701,0,0,0,13.0611546814753,0,0.0788057072991982,0.629455057619977,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0.904980694530854,0.66116300871345,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0.157054096250234,13.2910226995048,7.80968095372564,4.00610978260799,1.14681839138014,0.221858103073705,0.496771223531068,0.415045904808692,0.249960815924213,0.303298235083296,0.285465333544967,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23682402162117,0,0,0.256241518587947,0,0,4.83904526531058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20130602011215,0,0,0,0,0,0,0,0,0,8.0928823621539,8.5017945795351,5.10828348982884,10.6660509405193,3.52900374710405,10.9960031418106,7.75083099032885,0,0,0.235939446695481,0,0,0,0.690359926060101,0,0.977734268540344,0,4.68908406739856,0,0.163771917510097,0,13.1022914159686,5.46754669029693,4.54710952302605,11.0977667839337,1.64092442705466,8.22386650285773,0.496211178389294,0,0.383287282918786,0.535701835878287,0,0,0.227662191351298,0.0887023701626388,0,0.171488009437418,3.73833531372574,11.0498259585586,0,0.667388411352415,4.08164082822673,0.471346769748006,0,1.82631744101899,0,0,2.35872595782966,0,0,0.173858272302579,0,0,0,0,12.0463660469678,0,0,6.35080575286394,0.4582137370881,0,0,0,0,0.121917924982269,0,0,0,1.45713297917742,0.233939463462106,0,0.118920090777569,5.42141193787008,0,0,0.540219106755613,0.437119121007915,0,12.5025644094492,0.471353094203252,0,0,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,2.19100916473955,11.009502801709,0.143339583151451,0,11.966502273601,1.74540276136151,1.5870805215462,0,0,0,0,0,0,0,0,1.01084389488329,0,0.227336094654718,0,1.65833887891756,0.310298987585686,0.426467963801962,1.1903221573187,0,0.0620747142958579,0.560659312903067,0.381882949668989,0.202117188958219,0,0,0.471464371102113,1.07583308089015,0.332660356546013,0,0.106727345877715,0,0,0,1.4668973301944,0.406896178315738,2.66302709674205,0,0 | |||
|short_description=p3@CHRM3 | |||
}} |
Revision as of 00:59, 11 January 2014
Short description: | p3@CHRM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CHRM3_5end |
Coexpression cluster: | C1067_ductus_salivary_smooth_submaxillary_medial_parotid_seminal |
Association with transcript: | 23bp_to_ENST00000492335_5end |
EntrezGene: | CHRM3 |
HGNC: | 1952 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data