FFCP PHASE1:Hg19::chr10:26505642..26505653,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2572 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4093 | |||
|TSSclassifier=strong | |||
|UniProt=Q5VZ31 | |||
|association_with_transcript=-8bp_to_ENST00000428517_5end | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_5_at_GAD2_5end | |||
|id=chr10:26505642..26505653,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.12e-18;82!UBERON:0006215;4.84e-17;3!UBERON:0010122;9.13e-13;2!UBERON:0006222;3.62e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.65e-96!57;UBERON:0005068!5.65e-96!57;UBERON:0006241!5.65e-96!57;UBERON:0007135!5.65e-96!57;UBERON:0001017!1.09e-89!82;UBERON:0005743!2.20e-88!86;UBERON:0002616!4.23e-80!59;UBERON:0000073!6.00e-79!94;UBERON:0001016!6.00e-79!94;UBERON:0000955!8.70e-77!69;UBERON:0006238!8.70e-77!69;UBERON:0002020!1.05e-76!34;UBERON:0003528!1.05e-76!34;UBERON:0001893!1.37e-76!34;UBERON:0002780!1.47e-76!41;UBERON:0001890!1.47e-76!41;UBERON:0006240!1.47e-76!41;UBERON:0003075!5.13e-75!86;UBERON:0007284!5.13e-75!86;UBERON:0003080!1.49e-74!42;UBERON:0002791!1.21e-73!33;UBERON:0001869!1.44e-71!32;UBERON:0002346!3.70e-71!90;UBERON:0002619!2.27e-58!22;UBERON:0003056!7.38e-58!61;UBERON:0001950!2.54e-53!20;UBERON:0000956!6.60e-51!25;UBERON:0000203!6.60e-51!25;UBERON:0007023!1.40e-49!115;UBERON:0000033!1.29e-46!123;UBERON:0000153!6.64e-44!129;UBERON:0007811!6.64e-44!129;UBERON:0004121!7.27e-44!169;UBERON:0000924!1.48e-42!173;UBERON:0006601!1.48e-42!173;UBERON:0002308!2.81e-27!9;UBERON:0000125!2.81e-27!9;UBERON:0002420!4.43e-27!9;UBERON:0007245!4.43e-27!9;UBERON:0010009!4.43e-27!9;UBERON:0010011!4.43e-27!9;UBERON:0000454!4.43e-27!9;UBERON:0009663!8.68e-22!7;UBERON:0003076!2.14e-21!15;UBERON:0003057!2.14e-21!15;UBERON:0000025!2.99e-20!194;UBERON:0000200!2.88e-18!6;UBERON:0001871!1.24e-17!7;UBERON:0001872!3.40e-15!5;UBERON:0002021!3.83e-15!5;UBERON:0000349!6.31e-15!5;UBERON:0004733!9.84e-15!12;UBERON:0002028!9.84e-15!12;UBERON:0007277!9.84e-15!12;UBERON:0000064!2.45e-14!219;UBERON:0004111!4.06e-14!241;UBERON:0000369!7.32e-14!4;UBERON:0002435!7.32e-14!4;UBERON:0000204!7.32e-14!4;UBERON:0010082!7.32e-14!4;UBERON:0000483!1.17e-13!309;UBERON:0004732!1.73e-13!13;UBERON:0000119!2.08e-13!312;UBERON:0002298!1.95e-12!8;UBERON:0000475!8.61e-12!365;UBERON:0002680!1.08e-11!9;UBERON:0001895!1.08e-11!9;UBERON:0010092!1.08e-11!9;UBERON:0000477!1.11e-11!286;UBERON:0005383!7.43e-11!3;UBERON:0005382!7.43e-11!3;UBERON:0002771!1.10e-09!3;UBERON:0000988!1.48e-09!3;UBERON:0006331!1.61e-09!3;UBERON:0000062!5.35e-09!511;UBERON:0002240!5.90e-09!3;UBERON:0000922!1.75e-08!612;UBERON:0001873!8.88e-08!2;UBERON:0010122!8.88e-08!2;UBERON:0001870!1.62e-07!2;UBERON:0001897!1.67e-07!2;UBERON:0001875!2.42e-07!2;UBERON:0006514!2.42e-07!2;UBERON:0002148!3.50e-07!2;UBERON:0009662!3.50e-07!2;UBERON:0001876!5.49e-07!2;UBERON:0000468!8.47e-07!659 | |||
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|short_description=p5@GAD2 | |||
}} |
Revision as of 02:15, 11 January 2014
Short description: | p5@GAD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GAD2_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -8bp_to_ENST00000428517_5end |
EntrezGene: | GAD2 |
HGNC: | 4093 |
UniProt: | Q5VZ31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data