FFCP PHASE1:Hg19::chr10:49482907..49482923,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=143162 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28572 | |||
|TSSclassifier=strong | |||
|UniProt=Q68DX3 | |||
|association_with_transcript=0bp_to_ENST00000374201_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_2_at_FRMPD2_5end | |||
|id=chr10:49482907..49482923,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.06e-21;3!UBERON:0010227;2.43e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.63e-49!57;UBERON:0005068!1.63e-49!57;UBERON:0006241!1.63e-49!57;UBERON:0007135!1.63e-49!57;UBERON:0000955!1.56e-48!69;UBERON:0006238!1.56e-48!69;UBERON:0005743!4.99e-46!86;UBERON:0001017!1.66e-45!82;UBERON:0002616!3.89e-44!59;UBERON:0003075!8.70e-44!86;UBERON:0007284!8.70e-44!86;UBERON:0002346!1.75e-41!90;UBERON:0000073!6.10e-41!94;UBERON:0001016!6.10e-41!94;UBERON:0002780!2.90e-40!41;UBERON:0001890!2.90e-40!41;UBERON:0006240!2.90e-40!41;UBERON:0003080!3.44e-39!42;UBERON:0007023!2.07e-37!115;UBERON:0003056!1.20e-33!61;UBERON:0000033!1.11e-29!123;UBERON:0000153!6.38e-28!129;UBERON:0007811!6.38e-28!129;UBERON:0002020!1.74e-25!34;UBERON:0003528!1.74e-25!34;UBERON:0001893!2.28e-25!34;UBERON:0002791!4.80e-23!33;UBERON:0004121!3.34e-22!169;UBERON:0000924!1.71e-21!173;UBERON:0006601!1.71e-21!173;UBERON:0001869!1.33e-20!32;UBERON:0001894!1.09e-19!7;UBERON:0006222!1.09e-19!7;UBERON:0002308!2.77e-19!9;UBERON:0000125!2.77e-19!9;UBERON:0002298!1.42e-16!8;UBERON:0003296!3.67e-16!4;UBERON:0010133!3.67e-16!4;UBERON:0000025!1.20e-13!194;UBERON:0002619!2.10e-13!22;UBERON:0009663!7.03e-13!7;UBERON:0006331!2.88e-12!3;UBERON:0001950!6.66e-12!20;UBERON:0000988!8.24e-12!3;UBERON:0000956!1.22e-11!25;UBERON:0000203!1.22e-11!25;UBERON:0003076!2.99e-11!15;UBERON:0003057!2.99e-11!15;UBERON:0004733!1.43e-10!12;UBERON:0002028!1.43e-10!12;UBERON:0007277!1.43e-10!12;UBERON:0002420!5.92e-10!9;UBERON:0007245!5.92e-10!9;UBERON:0010009!5.92e-10!9;UBERON:0010011!5.92e-10!9;UBERON:0000454!5.92e-10!9;UBERON:0004732!1.04e-09!13;UBERON:0004111!1.80e-09!241;UBERON:0001905!2.41e-09!2;UBERON:0002757!2.41e-09!2;UBERON:0010134!2.41e-09!2;UBERON:0002784!2.41e-09!2;UBERON:0005408!2.41e-09!2;UBERON:0001899!2.41e-09!2;UBERON:0000483!3.93e-09!309;UBERON:0000119!5.83e-09!312;UBERON:0002148!1.14e-08!2;UBERON:0009662!1.14e-08!2;UBERON:0001897!1.19e-08!2;UBERON:0000007!1.55e-08!2;UBERON:0000064!1.75e-08!219;UBERON:0001875!2.33e-08!2;UBERON:0006514!2.33e-08!2;UBERON:0000477!3.86e-08!286;UBERON:0003127!4.21e-08!2;UBERON:0000475!1.52e-07!365;UBERON:0002021!6.86e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.35e-32;2!UBERON:0002757;3.35e-32;2!UBERON:0010134;3.35e-32;2!UBERON:0005408;3.35e-32;2!UBERON:0001899;3.35e-32;2!UBERON:0003296;1.21e-16;4!UBERON:0010133;1.21e-16;4!UBERON:0002784;1.21e-16;4!UBERON:0002079;2.43e-16;1!UBERON:0002135;2.43e-16;1!UBERON:0002331;2.28e-14;10!UBERON:0000966;2.94e-13;5!UBERON:0005388;2.94e-13;5!UBERON:0001802;2.94e-13;5!UBERON:0001894;6.40e-10;7!UBERON:0000178;8.78e-10;15!UBERON:0000179;8.78e-10;15!UBERON:0000463;8.78e-10;15!UBERON:0002081;7.79e-09;2!UBERON:0002133;7.79e-09;2!UBERON:0000970;1.57e-07;20!UBERON:0002104;3.38e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.35e-32,2;UBERON:0002757,3.35e-32,2;UBERON:0010134,3.35e-32,2;UBERON:0005408,3.35e-32,2;UBERON:0001899,3.35e-32,2;UBERON:0003296,1.21e-16,4;UBERON:0010133,1.21e-16,4;UBERON:0002784,1.21e-16,4;UBERON:0002135,1.93e-16,1;UBERON:0002079,2.25e-16,1;UBERON:0002331,2.13e-14,10;UBERON:0000358,2.13e-14,10;UBERON:0000307,2.13e-14,10;UBERON:0000091,2.13e-14,10;UBERON:0000087,2.13e-14,10;UBERON:0007010,2.13e-14,10;UBERON:0007806,2.13e-14,10;UBERON:0008780,2.13e-14,10;UBERON:0005728,2.13e-14,10;UBERON:0000966,3.57e-11,6;UBERON:0005388,3.57e-11,6;UBERON:0001802,3.57e-11,6;UBERON:0001894,6.40e-10,7;UBERON:0006222,6.40e-10,7;UBERON:0000178,8.40e-10,15;UBERON:0000179,8.40e-10,15;UBERON:0000463,8.40e-10,15;UBERON:0002133,6.94e-09,2;UBERON:0002081,7.49e-09,2;UBERON:0010227,7.49e-09,2;UBERON:0000970,3.49e-07,21;UBERON:0002104,3.49e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07564790076435,2.22415090103705,2.08843899010911,0.404406797884062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9769792613682,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,1.67569440763353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.665574309221114,0.310482014706917,14.2499093984318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0,0,0,0,0,0,37.4991285114801,43.7168838884471,0.606965604236632,0.227662191351298,0,0,0,0.135939465953663,0.0657727735628491,0,0,0,0,0,0,0,0,10.2926223614385,2.05417695252545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20934568419972,0.150962843566674,0,0,0,0,0,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0.860037498908708,0,0.135982980381829,0,0,0,0,0,0,0.109265571963696,1.39368351112581,0,0,0,0,0,0,0.829169439458779,0.310298987585686,0,0,0,0,0,0,0.202117188958219,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@FRMPD2 | |||
}} |
Revision as of 02:44, 11 January 2014
Short description: | p2@FRMPD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FRMPD2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000374201_5end |
EntrezGene: | FRMPD2 |
HGNC: | 28572 |
UniProt: | Q68DX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 3.35e-32 | 2 |
regional part of epithalamus | 3.35e-32 | 2 |
secretory circumventricular organ | 3.35e-32 | 2 |
circumventricular organ | 3.35e-32 | 2 |
epithalamus | 3.35e-32 | 2 |
gland of diencephalon | 1.21e-16 | 4 |
neuroendocrine gland | 1.21e-16 | 4 |
regional part of diencephalon | 1.21e-16 | 4 |
mitral valve | 1.93e-16 | 1 |
left cardiac atrium | 2.25e-16 | 1 |
umbilical cord | 2.13e-14 | 10 |
blastocyst | 2.13e-14 | 10 |
blastula | 2.13e-14 | 10 |
bilaminar disc | 2.13e-14 | 10 |
inner cell mass | 2.13e-14 | 10 |
cleaving embryo | 2.13e-14 | 10 |
connecting stalk | 2.13e-14 | 10 |
inner cell mass derived epiblast | 2.13e-14 | 10 |
extraembryonic mesoderm | 2.13e-14 | 10 |
retina | 3.57e-11 | 6 |
photoreceptor array | 3.57e-11 | 6 |
posterior segment of eyeball | 3.57e-11 | 6 |
diencephalon | 6.40e-10 | 7 |
future diencephalon | 6.40e-10 | 7 |
blood | 8.40e-10 | 15 |
haemolymphatic fluid | 8.40e-10 | 15 |
organism substance | 8.40e-10 | 15 |
atrioventricular valve | 6.94e-09 | 2 |
cardiac atrium | 7.49e-09 | 2 |
future cardiac atrium | 7.49e-09 | 2 |
eye | 3.49e-07 | 21 |
visual system | 3.49e-07 | 21 |