FFCP PHASE1:Hg19::chr11:2018636..2018661,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt=Q9UHT2 | |||
|association_with_transcript=151bp_to_AF118081_5end | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_6_at_AF118081_5end | |||
|id=chr11:2018636..2018661,+ | |||
|ontology_enrichment_celltype=CL:0000188!2.97e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;9.56e-17;19!CL:0002577;6.92e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.50e-17,19;CL:0002577,6.82e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.22e-09;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.22e-14!14;UBERON:0000158!6.22e-14!14;UBERON:0001737!8.71e-13!9;UBERON:0000478!2.37e-12!24;UBERON:0001557!6.07e-12!19;UBERON:0003124!1.67e-10!7;UBERON:0003104!7.45e-10!238;UBERON:0009142!7.45e-10!238;UBERON:0000481!2.78e-09!347;UBERON:0004921!4.18e-07!129;UBERON:0004185!4.18e-07!129;UBERON:0001987!5.11e-07!4;UBERON:0004340!5.11e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.89e-24;9!UBERON:0001557;6.89e-24;9!UBERON:0000478;6.70e-18;24!UBERON:0001134;1.40e-14;16!UBERON:0002036;1.40e-14;16!UBERON:0005631;1.23e-13;10!UBERON:0000158;1.23e-13;10!UBERON:0001987;2.09e-12;4!UBERON:0000305;2.91e-10;7!UBERON:0001723;2.68e-09;3!UBERON:0001033;2.68e-09;3!UBERON:0000072;1.79e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.55e-24,9;UBERON:0005631,1.49e-23,14;UBERON:0000158,1.49e-23,14;UBERON:0001557,8.25e-19,19;UBERON:0000478,6.57e-18,24;UBERON:0003124,3.24e-15,7;UBERON:0001987,1.98e-12,4;UBERON:0004340,1.98e-12,4;UBERON:0000305,2.89e-10,7;UBERON:0000072,1.41e-09,47;UBERON:0001723,2.50e-09,3;UBERON:0001033,2.50e-09,3;UBERON:0010056,2.50e-09,3;UBERON:0004871,6.34e-09,8;UBERON:0004119,3.39e-08,160;UBERON:0000925,3.39e-08,160;UBERON:0006595,3.39e-08,160;UBERON:0000065,7.05e-08,54;UBERON:0001041,1.71e-07,87;UBERON:0004921,5.41e-07,118;UBERON:0004923,6.12e-07,66 | |||
|phase1_expression=0,0.214100523890983,0,2.00146596706261,0.446961094427288,2.61701557230111,0,0,0,0.491467873003018,0,9.61142037372758,8.70431028153897,0.618831764800233,2.31978163009541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0.973269740605272,0.0945348171640679,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,2.24271040056923,0,0,0.311211035399766,0,0,0.151357427644931,22.47086105472,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580969714347592,0.10366105501537,0.504641701751257,0,0,0,0,0,0,6.98010120235079,7.08055698328027,8.43538604592187,7.279402200338,8.27941887551143,6.8808479542218,10.7865046528132,4.70931516300831,10.7729203944989,0,0,0.4115740113314,5.88034845542168,0,0,2.36315962672562,0,0,0,0,0,0,1.48141512253647,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,28.216323480355,0.823240336780769,0,0.710783897485092,0.791951872933429,0,0,0,0,0,0,0,0,0,1.15825045334063,2.87666851570537,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0.813795071099207,0,0,0,0,0.601892199455438,0,2.0694614258501,0,0,0,5.48243240895674,10.9805895619474,0,0,0,17.8845267153293,28.2940247167845,26.3079555196822,0.248107807818777,0,0.280660094433074,0,0,0.321707842287215,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,1.13733384070897,0,0,0,0,1.50506932156456,0,0,0,0,0,0,0,0,0.824328093181778,0.0915694648183434,0,0,0,0,2.61010939388729,0.924291702687866,0.921022048356777,2.34322173223702,0.107420244868274,1.59518363305651,0.852266274161009,10.4167481706683,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0.632758849437452,0,0,2.1396949401696,0,0,0.179872457583315,0,0,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,1.47373561519682,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,14.8021580537368,5.3453642549875,37.1664449540071,0,0,0,0,0,0,0,0.755798243562828,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,1.18193840883968,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.846452843541768,0,0.23056390438806,1.88491053260521,2.39024218228418,18.8210684241832,0.457987967009312,33.581190889174,0,0,0,0.451191321234361,0,0,0,0,0,0,0,0,0,0.353830258013357,4.27721101453538,0,0,0,0,20.0644411824697,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.193978032976839,0,2.03382666702479,0,0,0,0,0,0,14.5861014994955,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0.199679000498991,0.429226048136571,0.446342914883745,0.671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,1.46872846777995,0,0,0,1.42939065274673,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0.439656701034247,30.4765844498109,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.40030541129469,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07824811396682,0,0.873677105536111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,1.42769420259154,0,0,0.366857197043358,10.6283612858311,0,0,0,0.225630985047772,0,0,13.3572414185525,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0.638812138197976,0,0,0,0,9.84596308805291,0,0,0,0,0,0,0.470958557103084,0,2.24217730651031,13.6973808076424,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.9164274741762,0,0,0,0,0,1.29485767437579,4.31183788796237,22.0364741954258,0,0,0,0,0,0,0,0,0.437119121007915,0,0.245148321753905,0.235676547101626,0,0,0.8453114551668,0,0,1.16024198352439,0,0.178553938605658,0,0,1.46067277649303,0,0,0,0,0,3.7031878836078,0,0,9.08515780459957,0,0.218531143927391,0.253397002022874,0,0,0,0,0.227336094654718,0.535928260312357,0,0,0.426467963801962,4.76128862927481,0,0.124149428591716,0,0,4.44657815708082,4.78976845373315,19.507298161861,0.5388164241167,0.215166616178029,10.3124710529264,0,0,0,0,9.38563769613817,0.244482888365733,5.69654649642034,0,0.201273793591026,0 | |||
|short_description=p6@AF118081 | |||
}} |
Revision as of 06:07, 11 January 2014
Short description: | p6@AF118081 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_AF118081_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 151bp_to_AF118081_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.50e-17 | 19 |
placental epithelial cell | 6.82e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.55e-24 | 9 |
extraembryonic membrane | 1.49e-23 | 14 |
membranous layer | 1.49e-23 | 14 |
upper respiratory tract | 8.25e-19 | 19 |
extraembryonic structure | 6.57e-18 | 24 |
chorion | 3.24e-15 | 7 |
placenta | 1.98e-12 | 4 |
allantois | 1.98e-12 | 4 |
amnion | 2.89e-10 | 7 |
segment of respiratory tract | 1.41e-09 | 47 |
tongue | 2.50e-09 | 3 |
gustatory system | 2.50e-09 | 3 |
future tongue | 2.50e-09 | 3 |
somatic layer of lateral plate mesoderm | 6.34e-09 | 8 |
endoderm-derived structure | 3.39e-08 | 160 |
endoderm | 3.39e-08 | 160 |
presumptive endoderm | 3.39e-08 | 160 |
respiratory tract | 7.05e-08 | 54 |
foregut | 1.71e-07 | 87 |
subdivision of digestive tract | 5.41e-07 | 118 |
organ component layer | 6.12e-07 | 66 |