FFCP PHASE1:Hg19::chr11:5255861..5255888,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3045 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4829 | |||
|TSSclassifier=strong | |||
|UniProt=P02042 | |||
|association_with_transcript=0bp_to_ENST00000380299_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_3_at_HBD_5end | |||
|id=chr11:5255861..5255888,- | |||
|ontology_enrichment_celltype=CL:0000764!1.22e-08!2;CL:0000765!1.22e-08!2;CL:0000050!1.22e-08!2;CL:0000038!1.22e-08!2;CL:0000558!1.22e-08!2;CL:0000547!1.22e-08!2;CL:0000549!1.22e-08!2;CL:0000550!1.22e-08!2;CL:0000552!1.22e-08!2;CL:0000763!4.59e-08!112;CL:0000049!4.59e-08!112;CL:0000037!1.64e-07!172;CL:0000566!1.64e-07!172;CL:0002032!2.85e-07!165;CL:0000837!2.85e-07!165;CL:0000988!8.95e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000764;4.49e-30;2!CL:0000558;4.49e-30;2!CL:0000511;2.56e-15;1!CL:0002625;2.56e-15;1!CL:0000216;2.56e-15;1!CL:0000047;2.57e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.49e-30,2;CL:0000765,4.49e-30,2;CL:0000050,4.49e-30,2;CL:0000038,4.49e-30,2;CL:0000558,4.49e-30,2;CL:0000547,4.49e-30,2;CL:0000549,4.49e-30,2;CL:0000550,4.49e-30,2;CL:0000552,4.49e-30,2;CL:0000511,2.06e-15,1;CL:0002625,2.06e-15,1;CL:0000216,2.06e-15,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!4.15e-21!31;DOID:2531!7.20e-19!51;DOID:0060083!7.20e-19!51;DOID:1240!2.41e-18!39;DOID:1036!1.12e-14!8 | |||
|ontology_enrichment_disease_v019=DOID:9119;2.56e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,1.78e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.39e-08!15;UBERON:0000179!4.39e-08!15;UBERON:0000463!4.39e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.77e-15;15!UBERON:0000179;1.77e-15;15!UBERON:0000463;1.77e-15;15!UBERON:0001136;2.56e-15;1!UBERON:0001343;2.56e-15;1!UBERON:0004910;2.56e-15;1!UBERON:0004813;2.56e-15;1!UBERON:0004909;2.57e-08;2!UBERON:0002390;1.45e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.84e-15,15;UBERON:0000179,1.84e-15,15;UBERON:0000463,1.84e-15,15;UBERON:0001136,2.06e-15,1;UBERON:0001343,2.06e-15,1;UBERON:0004910,2.06e-15,1;UBERON:0005154,2.06e-15,1;UBERON:0005295,2.06e-15,1;UBERON:0004813,2.06e-15,1;UBERON:0005297,2.06e-15,1;UBERON:0005294,2.06e-15,1;UBERON:0010141,2.06e-15,1;UBERON:0005891,2.06e-15,1;UBERON:0004909,2.31e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,4.74091352595139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0.492663237895943,0.44024217006613,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,226.276192698604,277.383013537419,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0.764637207142375,3.41788312304498,0.238231775457789,0,0,2.16012574895246,5.55187623405989,0,0,0,0,0,0.213425530045242,0,0.199579371432817,0.383010740264733,0,0,0.561594356226918,0,0.156679895773023,2.50634477090067,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0.270455678475983,1.6653598399891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.997270091400938,0.676786981851542,0.980312671588698,0.167821586975843,0.75901493089674,0.476809736941136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,1.32506888912221,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.7682660767924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0.644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p3@HBD | |||
}} |
Revision as of 06:19, 11 January 2014
Short description: | p3@HBD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HBD_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000380299_5end |
EntrezGene: | HBD |
HGNC: | 4829 |
UniProt: | P02042 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.49e-30 | 2 |
erythroblast | 4.49e-30 | 2 |
megakaryocyte-erythroid progenitor cell | 4.49e-30 | 2 |
erythroid progenitor cell | 4.49e-30 | 2 |
reticulocyte | 4.49e-30 | 2 |
proerythroblast | 4.49e-30 | 2 |
basophilic erythroblast | 4.49e-30 | 2 |
polychromatophilic erythroblast | 4.49e-30 | 2 |
orthochromatic erythroblast | 4.49e-30 | 2 |
androgen binding protein secreting cell | 2.06e-15 | 1 |
seminiferous tubule epithelial cell | 2.06e-15 | 1 |
Sertoli cell | 2.06e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 1.84e-15 | 15 |
haemolymphatic fluid | 1.84e-15 | 15 |
organism substance | 1.84e-15 | 15 |
mesothelium | 2.06e-15 | 1 |
seminiferous tubule of testis | 2.06e-15 | 1 |
epithelium of male gonad | 2.06e-15 | 1 |
epithelial cord | 2.06e-15 | 1 |
sex cord | 2.06e-15 | 1 |
seminiferous tubule epithelium | 2.06e-15 | 1 |
testis sex cord | 2.06e-15 | 1 |
genital ridge | 2.06e-15 | 1 |
primitive sex cord of indifferent gonad | 2.06e-15 | 1 |
coelomic epithelium | 2.06e-15 | 1 |
epithelium of gonad | 2.31e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 1.78e-15 | 1 |