FFCP PHASE1:Hg19::chr11:65193524..65193532,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283131 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=30815 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AF080092,AF508303_5end | |||
|coexpression_cluster_id=C743 | |||
|description=CAGE_peak_2_at_NEAT1_5end | |||
|id=chr11:65193524..65193532,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.29e-25!42;CL:0000860!5.65e-23!45;CL:0002009!1.21e-18!65;CL:0002194!1.22e-17!63;CL:0000576!1.22e-17!63;CL:0000040!1.22e-17!63;CL:0000559!1.22e-17!63;CL:0000557!4.35e-16!71;CL:0000766!7.86e-16!76;CL:0000839!9.82e-16!70;CL:0000763!6.28e-11!112;CL:0000049!6.28e-11!112;CL:0002031!2.07e-10!124;CL:0000738!5.05e-10!140;CL:0002087!6.39e-10!119;CL:0002032!8.48e-08!165;CL:0000837!8.48e-08!165;CL:0000037!5.99e-07!172;CL:0000566!5.99e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.33e-26;33!CL:0002057;5.33e-26;33!CL:0000576;1.29e-18;48!CL:0000473;3.12e-18;39!CL:0000234;3.12e-18;39!CL:0000766;7.58e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.70e-34,42;CL:0002057,5.70e-34,42;CL:0000473,4.93e-30,48;CL:0000234,4.93e-30,48;CL:0002009,4.05e-25,61;CL:0002194,9.87e-24,59;CL:0000576,9.87e-24,59;CL:0000040,9.87e-24,59;CL:0000559,9.87e-24,59;CL:0000557,5.64e-21,67;CL:0000766,3.56e-20,72;CL:0000839,4.34e-19,66;CL:0000763,2.44e-13,108;CL:0000049,2.44e-13,108;CL:0000738,9.65e-11,136;CL:0002031,2.35e-10,120;CL:0002087,2.79e-10,115;CL:0000134,3.19e-08,354;CL:0002032,7.38e-08,161;CL:0000837,7.38e-08,161;CL:0002320,2.17e-07,361;CL:0002393,3.79e-07,9;CL:0002397,3.79e-07,9;CL:0000037,5.00e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;2.44e-24;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.34e-16!80;UBERON:0002390!1.06e-15!102;UBERON:0003061!1.06e-15!102;UBERON:0001474!2.29e-14!86;UBERON:0002193!6.97e-14!112;UBERON:0004765!1.50e-11!101;UBERON:0001434!1.50e-11!101;UBERON:0002405!1.26e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.50e-21,76;UBERON:0002390,8.01e-21,98;UBERON:0003061,8.01e-21,98;UBERON:0001474,3.58e-19,82;UBERON:0002193,1.29e-18,108;UBERON:0002405,2.17e-17,93;UBERON:0004765,1.50e-15,90;UBERON:0001434,3.75e-14,100;UBERON:0002204,4.15e-07,167;UBERON:0002384,7.26e-07,371 | |||
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| |||
|short_description=p2@NEAT1 | |||
}} |
Revision as of 08:35, 11 January 2014
Short description: | p2@NEAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NEAT1_5end |
Coexpression cluster: | C743_CD14_anaplastic_skeletal_submaxillary_Fibroblast_peripheral_Preadipocyte |
Association with transcript: | 0bp_to_AF080092, AF508303_5end |
EntrezGene: | NEAT1 |
HGNC: | 30815 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.70e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.70e-34 | 42 |
defensive cell | 4.93e-30 | 48 |
phagocyte | 4.93e-30 | 48 |
macrophage dendritic cell progenitor | 4.05e-25 | 61 |
monopoietic cell | 9.87e-24 | 59 |
monocyte | 9.87e-24 | 59 |
monoblast | 9.87e-24 | 59 |
promonocyte | 9.87e-24 | 59 |
granulocyte monocyte progenitor cell | 5.64e-21 | 67 |
myeloid leukocyte | 3.56e-20 | 72 |
myeloid lineage restricted progenitor cell | 4.34e-19 | 66 |
myeloid cell | 2.44e-13 | 108 |
common myeloid progenitor | 2.44e-13 | 108 |
leukocyte | 9.65e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 2.35e-10 | 120 |
nongranular leukocyte | 2.79e-10 | 115 |
mesenchymal cell | 3.19e-08 | 354 |
hematopoietic oligopotent progenitor cell | 7.38e-08 | 161 |
hematopoietic multipotent progenitor cell | 7.38e-08 | 161 |
connective tissue cell | 2.17e-07 | 361 |
intermediate monocyte | 3.79e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.79e-07 | 9 |
hematopoietic stem cell | 5.00e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.50e-21 | 76 |
hematopoietic system | 8.01e-21 | 98 |
blood island | 8.01e-21 | 98 |
bone element | 3.58e-19 | 82 |
hemolymphoid system | 1.29e-18 | 108 |
immune system | 2.17e-17 | 93 |
skeletal element | 1.50e-15 | 90 |
skeletal system | 3.75e-14 | 100 |
musculoskeletal system | 4.15e-07 | 167 |
connective tissue | 7.26e-07 | 371 |