FFCP PHASE1:Hg19::chr11:71750847..71750859,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4926 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8059 | |||
|TSSclassifier=strong | |||
|UniProt=F5H2F3 | |||
|association_with_transcript=11bp_to_ENST00000544129_5end | |||
|description=CAGE_peak_16_at_NUMA1_5end | |||
|id=chr11:71750847..71750859,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;3.00e-09;4!DOID:1612;3.00e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.90e-09,4;DOID:1612,1.90e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.34e-21!115;UBERON:0001049!2.24e-11!57;UBERON:0005068!2.24e-11!57;UBERON:0006241!2.24e-11!57;UBERON:0007135!2.24e-11!57;UBERON:0002616!3.29e-10!59;UBERON:0003080!4.73e-09!42;UBERON:0001017!7.10e-09!82;UBERON:0001893!7.81e-09!34;UBERON:0001950!1.45e-08!20;UBERON:0005743!1.68e-08!86;UBERON:0002780!2.09e-08!41;UBERON:0001890!2.09e-08!41;UBERON:0006240!2.09e-08!41;UBERON:0002791!2.92e-08!33;UBERON:0001869!7.23e-08!32;UBERON:0000073!1.05e-07!94;UBERON:0001016!1.05e-07!94;UBERON:0000955!1.61e-07!69;UBERON:0006238!1.61e-07!69;UBERON:0002020!1.73e-07!34;UBERON:0003528!1.73e-07!34;UBERON:0002619!2.55e-07!22;UBERON:0003075!4.48e-07!86;UBERON:0007284!4.48e-07!86;UBERON:0000153!5.70e-07!129;UBERON:0007811!5.70e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.71e-15;20!UBERON:0002619;1.71e-13;22!UBERON:0000956;1.04e-11;25!UBERON:0000203;1.04e-11;25!UBERON:0000310;2.87e-09;10!UBERON:0002370;2.06e-08;2!UBERON:0005058;2.06e-08;2!UBERON:0009113;2.06e-08;2!UBERON:0001893;2.10e-08;34!UBERON:0001443;2.16e-08;11!UBERON:0002791;4.84e-08;32!UBERON:0001869;4.86e-08;32!UBERON:0001872;4.16e-07;5!UBERON:0007023;5.06e-07;114!UBERON:0002780;5.77e-07;41!UBERON:0001890;5.77e-07;41!UBERON:0003528;6.56e-07;34!UBERON:0002020;6.56e-07;34!UBERON:0002021;7.01e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.79e-21,114;UBERON:0001950,4.38e-15,20;UBERON:0002619,1.34e-13,22;UBERON:0000956,8.46e-12,25;UBERON:0000203,8.46e-12,25;UBERON:0001893,4.47e-10,34;UBERON:0001017,1.73e-09,81;UBERON:0000310,2.76e-09,10;UBERON:0001049,4.66e-09,56;UBERON:0005068,4.66e-09,56;UBERON:0006241,4.66e-09,56;UBERON:0007135,4.66e-09,56;UBERON:0003408,5.32e-09,10;UBERON:0002791,6.98e-09,32;UBERON:0001869,6.98e-09,32;UBERON:0001443,2.09e-08,11;UBERON:0000073,2.78e-08,53;UBERON:0002616,2.78e-08,53;UBERON:0003528,2.89e-08,34;UBERON:0002020,2.89e-08,34;UBERON:0001016,3.63e-08,89;UBERON:0002780,4.99e-08,41;UBERON:0001890,4.99e-08,41;UBERON:0003080,4.99e-08,41;UBERON:0006240,4.99e-08,41;UBERON:0001872,3.19e-07,5;UBERON:0002021,4.57e-07,5;UBERON:0000955,8.94e-07,68;UBERON:0006238,8.94e-07,68 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0,0.196709770113833,0.786021525498329,0.822405995998037,1.17030546773475,0.32592226663359,0,0,0.222820913770347,0.294605907474837,0,0.270803863765016,0.512365278902701,0.130059347559878,0.328875809207352,0,0,0.593146252648242,0.802622484269139,1.04535523804977,0.226618685395132,0.383220493601921,0.34362744548263,0,0,0,0,0,0.511946444617674,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,0,0,0.361439152384566,0,0.434539556882471,0,0.486634870302636,0,0,0.087834785693126,1.11332214173056,0,0,0,0,0,0.476981248610684,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0.358779271377724,0.640672166455702,0.211931901159562,0.600182192168805,0.206105058476878,0.515281080091258,0.930584281657949,0.506328996723799,0.0974370051611986,0,0.368199594569197,0.484938170456436,0.710019185033229,0.201504196455281,0.339121184620975,0,0,0,0,0.662648841607426,0.116193942869518,0,0.252320850875628,0.72995471815166,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0.185176890317059,0.651616610620649,0,0,0.34779121492523,0.234817388471643,0,0,0,3.1608175918371,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.531876233169741,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0,0,0.179060963239896,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,3.86644406388848,0.837581326671744,1.27587750330633,0,0,0,0.49076596687656,0,0.271265023699736,0.415941723061614,0.356857977594324,0.315404830067869,0.585707074963566,0,0,0,0,0,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0.213455115606889,0,0,0,0,1.07423381301644,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.241718899183244,0,0.0920809889358963,0.114814448164607,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214840489736547,0.145016693914229,0,0,0,0,0,0,0.464845549297286,0.94443704049192,0,0,0,0,0.37064843820784,0,0,0,0.190630193923825,0,0,0,0,0,0.54907405947211,0,0,0,0.421258456238981,0,0.243713489631284,0,0.818999468447914,0.141405431953713,0,0.551365343546124,0,0.876901770507525,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0,0.569647187174163,0,0,0,0,0.79312517629427,0,0,0,0.557409525377156,0.28853842595289,0.853702120180969,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.296964680832639,0,0,0.422008249231538,0,0,3.80025734630388,1.19548792950642,0.276283915531148,0.251932747854276,0,0.123084805461069,0.622079175323615,0,0,0,0.197286811273867,0,0,0,1.02044907978036,0,0.7812832832557,7.78393999966142,2.17499872630438,0,0,0,0,0.291604613383254,0,0,0.60298219312704,0,1.3269511191747,0.591095237907095,0.438770794307945,0,0,1.69290568708354,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0.619202951523374,0.611030144933625,0,0,0,1.28062152663286,0,0,0.91227394607833,0,0,1.57833761139756,1.20990716048664,1.53036380815245,1.0741718536843,0,0,0,0,0,0,0,0.138674673013139,0,0,0,1.22308667769421,0,0,0,0,1.45483524732629,1.1473296469895,0.90392296312213,0,0,1.01297273529406,0.195551382734803,0,1.06726497369676,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0.669514372325618,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,1.15424157650247,0,0.394028536495991,0.104909176269996,0,0,0,0,0.662091970365432,0.76280561296425,0,0,0.326587360109409,0,0,0,0,0,0,0.258565912723101,0,0,0.704815022316672,0.213574825135389,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0.488105059607853,0.3755727921195,0,0.443716206147409,0.931446044120752,0,0,0,0,0,0.936669811613763,0.869526171664951,0.298509605773748,0,0,0.189403005275089,0.50313580350515,0.889811221596536,0,0.151230923763239,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0.337884881306145,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0.215649622793364,0,0.109209638192014,0,0,0,0,0.318004350653419,0.157723490002507,0,0,0,0.770750701157514,0,0.478901577171454,1.230698185444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| |||
|short_description=p16@NUMA1 | |||
}} |
Revision as of 09:12, 11 January 2014
Short description: | p16@NUMA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_NUMA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000544129_5end |
EntrezGene: | NUMA1 |
HGNC: | 8059 |
UniProt: | F5H2F3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 9.79e-21 | 114 |
neocortex | 4.38e-15 | 20 |
regional part of cerebral cortex | 1.34e-13 | 22 |
cerebral cortex | 8.46e-12 | 25 |
pallium | 8.46e-12 | 25 |
telencephalon | 4.47e-10 | 34 |
central nervous system | 1.73e-09 | 81 |
breast | 2.76e-09 | 10 |
neural tube | 4.66e-09 | 56 |
neural rod | 4.66e-09 | 56 |
future spinal cord | 4.66e-09 | 56 |
neural keel | 4.66e-09 | 56 |
gland of gut | 5.32e-09 | 10 |
regional part of telencephalon | 6.98e-09 | 32 |
cerebral hemisphere | 6.98e-09 | 32 |
chest | 2.09e-08 | 11 |
regional part of nervous system | 2.78e-08 | 53 |
regional part of brain | 2.78e-08 | 53 |
brain grey matter | 2.89e-08 | 34 |
gray matter | 2.89e-08 | 34 |
nervous system | 3.63e-08 | 89 |
regional part of forebrain | 4.99e-08 | 41 |
forebrain | 4.99e-08 | 41 |
anterior neural tube | 4.99e-08 | 41 |
future forebrain | 4.99e-08 | 41 |
parietal lobe | 3.19e-07 | 5 |
occipital lobe | 4.57e-07 | 5 |
brain | 8.94e-07 | 68 |
future brain | 8.94e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.90e-09 | 4 |
breast cancer | 1.90e-09 | 4 |