FFCP PHASE1:Hg19::chr11:118214979..118215011,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AK093775_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_AK093775_5end | |||
|id=chr11:118214979..118215011,- | |||
|ontology_enrichment_celltype=CL:0000084!3.71e-41!25;CL:0000827!3.71e-41!25;CL:0000791!3.43e-39!18;CL:0000789!3.43e-39!18;CL:0002420!3.43e-39!18;CL:0002419!3.43e-39!18;CL:0000790!3.43e-39!18;CL:0000625!6.85e-25!11;CL:0000838!1.04e-23!52;CL:0000542!4.07e-23!53;CL:0000051!4.07e-23!53;CL:0000738!6.72e-15!140;CL:0000624!2.52e-14!6;CL:0002087!8.86e-13!119;CL:0000037!5.73e-11!172;CL:0000566!5.73e-11!172;CL:0000988!8.16e-10!182;CL:0002031!2.72e-09!124;CL:0002032!1.02e-08!165;CL:0000837!1.02e-08!165;CL:0000898!2.75e-08!3;CL:0000623!2.01e-07!3;CL:0000825!2.01e-07!3;CL:0000842!2.68e-07!3;CL:0000767!5.77e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.31e-57;18!CL:0000789;2.31e-57;18!CL:0002419;2.31e-57;18!CL:0000084;1.23e-56;25!CL:0000625;4.73e-40;11!CL:0000624;1.98e-22;6!CL:0000542;7.16e-17;53!CL:0000898;1.46e-12;3!CL:0000623;3.57e-11;3!CL:0000815;5.10e-09;2!CL:0000792;5.10e-09;2!CL:0002677;5.10e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.98e-57,18;CL:0000789,1.98e-57,18;CL:0002420,1.98e-57,18;CL:0002419,1.98e-57,18;CL:0000790,1.98e-57,18;CL:0000084,1.06e-56,25;CL:0000827,1.06e-56,25;CL:0000625,5.32e-40,11;CL:0000838,6.00e-33,52;CL:0000542,3.23e-32,53;CL:0000051,3.23e-32,53;CL:0000624,1.49e-22,6;CL:0002087,6.64e-13,115;CL:0000898,1.28e-12,3;CL:0000738,2.38e-12,136;CL:0000623,3.32e-11,3;CL:0000825,3.32e-11,3;CL:0002031,5.74e-11,120;CL:0000815,4.91e-09,2;CL:0000792,4.91e-09,2;CL:0002677,4.91e-09,2;CL:0000037,7.04e-09,168;CL:0000988,3.88e-08,177;CL:0002032,1.12e-07,161;CL:0000837,1.12e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;2.31e-57;18!CL:0000051;7.16e-17;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.87e-16!15;UBERON:0000179!2.87e-16!15;UBERON:0000463!2.87e-16!15;UBERON:0004177!2.80e-11!7;UBERON:0002370!9.57e-10!4;UBERON:0005058!9.57e-10!4;UBERON:0009113!9.57e-10!4;UBERON:0003295!9.57e-10!4;UBERON:0005562!9.57e-10!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.75e-14;15!UBERON:0000179;1.75e-14;15!UBERON:0000463;1.75e-14;15!UBERON:0002390;6.48e-09;32!UBERON:0002370;6.73e-09;2!UBERON:0005058;6.73e-09;2!UBERON:0009113;6.73e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.10e-14,15;UBERON:0000179,2.10e-14,15;UBERON:0000463,2.10e-14,15;UBERON:0002370,1.85e-09,4;UBERON:0005058,1.85e-09,4;UBERON:0009113,1.85e-09,4;UBERON:0003295,1.85e-09,4;UBERON:0005562,1.85e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.53531759238885,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0.971680998056939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,1.7703879310245,3.53709686474248,3.70082698199117,7.18901930179916,6.51844533267181,9.9424039204294,7.79306913631645,6.23898558556972,4.41908861212256,5.31681347000691,5.95768500283034,3.84273959177025,6.37290803043403,3.94650971048823,6.07970039128866,4.34704628602579,8.6006206633995,5.88589821797369,7.31748666634838,3.39928028092699,4.59864592322305,5.49803912772208,5.81945291644857,3.82278497188916,3.25541726928209,7.60361635558699,6.625305239422,6.52731716887534,1.24930726552346,4.49876778883632,4.10563998460523,3.42731463482045,2.67440195783507,3.33096128930438,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,1.77327684181734,1.72502059887614,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,0.862856803274467,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,3.0585488285695,1.70894156152249,0.714695326373367,3.29089818468955,2.59389324477087,3.7802200606668,5.55187623405989,0,0,0,0,0,5.26449640778264,3.98565681822056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,7.15353087370155,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0.194860308839388,0.398594520940089,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0.245148321753905,0,0,0,0,0,0.751871343838829,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,4.32745695901241,5.58672428662721,0,0,0,0,0,0.80822463617505,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | |||
|short_description=p1@AK093775 | |||
}} |
Revision as of 10:38, 11 January 2014
Short description: | p1@AK093775 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK093775_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_AK093775_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.98e-57 | 18 |
alpha-beta T cell | 1.98e-57 | 18 |
immature T cell | 1.98e-57 | 18 |
mature T cell | 1.98e-57 | 18 |
immature alpha-beta T cell | 1.98e-57 | 18 |
T cell | 1.06e-56 | 25 |
pro-T cell | 1.06e-56 | 25 |
CD8-positive, alpha-beta T cell | 5.32e-40 | 11 |
lymphoid lineage restricted progenitor cell | 6.00e-33 | 52 |
lymphocyte | 3.23e-32 | 53 |
common lymphoid progenitor | 3.23e-32 | 53 |
CD4-positive, alpha-beta T cell | 1.49e-22 | 6 |
nongranular leukocyte | 6.64e-13 | 115 |
naive T cell | 1.28e-12 | 3 |
leukocyte | 2.38e-12 | 136 |
natural killer cell | 3.32e-11 | 3 |
pro-NK cell | 3.32e-11 | 3 |
hematopoietic lineage restricted progenitor cell | 5.74e-11 | 120 |
regulatory T cell | 4.91e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.91e-09 | 2 |
naive regulatory T cell | 4.91e-09 | 2 |
hematopoietic stem cell | 7.04e-09 | 168 |
hematopoietic cell | 3.88e-08 | 177 |
hematopoietic oligopotent progenitor cell | 1.12e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.12e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 2.10e-14 | 15 |
haemolymphatic fluid | 2.10e-14 | 15 |
organism substance | 2.10e-14 | 15 |
thymus | 1.85e-09 | 4 |
hemolymphoid system gland | 1.85e-09 | 4 |
thymic region | 1.85e-09 | 4 |
pharyngeal gland | 1.85e-09 | 4 |
thymus primordium | 1.85e-09 | 4 |