FFCP PHASE1:Hg19::chr11:130029668..130029690,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6768 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11344 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y5Y6 | |||
|association_with_transcript=0bp_to_NM_021978,uc001qfw.2_5end | |||
|coexpression_cluster_id=C1334 | |||
|description=CAGE_peak_1_at_ST14_5end | |||
|id=chr11:130029668..130029690,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.25e-18!254;CL:0002076!2.91e-17!43;CL:0000223!2.62e-13!59;CL:0002251!4.09e-09!21;CL:0002368!3.38e-08!13;CL:0002159!2.81e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.15e-17;42!CL:0002251;2.25e-11;20!CL:0002368;3.87e-10;13!CL:0002202;1.95e-07;9!CL:0002632;1.95e-07;9!CL:0002159;3.59e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.06e-22,42;CL:0000066,3.03e-22,253;CL:0000223,1.37e-17,58;CL:0002251,1.90e-11,20;CL:0002368,3.91e-10,13;CL:0002202,1.97e-07,9;CL:0002632,1.97e-07,9;CL:0002159,3.83e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000223;1.47e-09;58!UBERON:0006595;2.38e-07;86 | |||
|ontology_enrichment_disease=DOID:305!4.83e-15!106;DOID:1749!1.25e-09!14;DOID:299!7.21e-08!25;DOID:0050687!1.00e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.53e-12;14!DOID:299;7.79e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.38e-16,106;DOID:1749,9.76e-12,14;DOID:0050687,2.76e-09,143;DOID:299,7.31e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.71e-20!169;UBERON:0000925!3.71e-20!169;UBERON:0006595!3.71e-20!169;UBERON:0001007!1.23e-16!155;UBERON:0001555!1.23e-16!155;UBERON:0007026!1.23e-16!155;UBERON:0004921!2.01e-15!129;UBERON:0004185!2.01e-15!129;UBERON:0001004!9.14e-13!72;UBERON:0000077!3.70e-12!130;UBERON:0000464!1.30e-11!104;UBERON:0000466!2.40e-10!126;UBERON:0000062!2.85e-10!511;UBERON:0000065!7.24e-10!53;UBERON:0001041!3.24e-09!98;UBERON:0005911!7.03e-09!82;UBERON:0005153!4.76e-08!37;UBERON:0005178!1.05e-07!34;UBERON:0002224!1.05e-07!34;UBERON:0000161!1.84e-07!35;UBERON:0008947!1.92e-07!38;UBERON:0003258!1.92e-07!38;UBERON:0005181!3.06e-07!35;UBERON:0000072!3.56e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.37e-12;33!UBERON:0005409;1.15e-09;22!UBERON:0005178;2.11e-08;34!UBERON:0002224;2.11e-08;34!UBERON:0005911;3.18e-08;36!UBERON:0001555;4.81e-08;54!UBERON:0004807;5.92e-08;22!UBERON:0005181;1.07e-07;35!UBERON:0000160;1.25e-07;17!UBERON:0002048;2.81e-07;22!UBERON:0000117;2.81e-07;22!UBERON:0000171;2.81e-07;22!UBERON:0000170;2.81e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.36e-24,160;UBERON:0000925,2.36e-24,160;UBERON:0006595,2.36e-24,160;UBERON:0001007,1.94e-20,145;UBERON:0001555,1.94e-20,145;UBERON:0007026,1.94e-20,145;UBERON:0004921,1.62e-18,118;UBERON:0005911,4.53e-13,82;UBERON:0001004,1.73e-11,74;UBERON:0005153,1.66e-10,37;UBERON:0001041,3.21e-10,87;UBERON:0005177,3.46e-10,101;UBERON:0005178,2.41e-09,34;UBERON:0002224,2.41e-09,34;UBERON:0001008,2.87e-09,48;UBERON:0000161,4.96e-09,36;UBERON:0006554,7.07e-09,47;UBERON:0005181,7.15e-09,35;UBERON:0005409,1.01e-08,25;UBERON:0005157,1.63e-08,47;UBERON:0000065,2.82e-08,54;UBERON:0009569,8.16e-08,112;UBERON:0000160,1.27e-07,17;UBERON:0002048,2.88e-07,22;UBERON:0000117,2.88e-07,22;UBERON:0000171,2.88e-07,22;UBERON:0000170,2.88e-07,22;UBERON:0005597,2.88e-07,22;UBERON:0000118,2.88e-07,22;UBERON:0000915,5.76e-07,52;UBERON:0004807,9.76e-07,28 | |||
|phase1_expression=0,0,0,0,0,1.74467704820074,0,0,0,66.8396307284104,236.554595942653,0.873765488520689,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0.305653622991805,0.410502947249729,0.236132343941038,0,0,0.77408061658038,51.4875885708199,55.7230949739763,27.7315507625091,40.9026819063993,11.6578770639686,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0.145398238779565,1.51150377475524,1.4555043671269,0,0,0.309706370895104,0,0.768482119587302,0.236482229888585,0,0.645484683583826,0,0.941211697713023,1.91034305040492,0.898893937780338,0,1.60464513538047,0.639337125799041,0.329851300186716,0.997318288108159,0,0,0,0,0.502497330513487,0,0.434377689410233,1.81619850790011,0.368277635987565,0.316462387440884,0,0.212604299965044,0.209658645508376,0.112328631146495,0.300353785683013,0.16072558669708,0,0,0,5.27988733383968,0.546138611262131,2.66852776159066,1.70692089026603,2.00197993518006,3.4485146397269,1.32208974556972,2.86216126360609,2.84606484554724,4.69789751496751,7.26319133437935,0,0.560508562981536,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,7.66227591661619,69.216104775583,54.8760975320955,5.8418530857843,4.17911369518241,3.98873881556595,6.67773748054957,4.57595928624102,7.4291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,95.0685033670725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.7532578352099,31.6385499885368,40.4394479498495,2.6834215348511,1.45782745153634,3.36962434321603,4.35376431064556,3.78481276313443,1.45990943630332,0,0,0,0,0,0.354920400119532,0.168584690078102,0.482022059766964,0.330881918197182,0,0.71181185733329,0.404493924480493,0,0.38474715694639,0,0,0,0,5.07020139287323,0,5.31710916013264,0,62.6011152184448,0,34.3518393328998,33.7205259772859,37.3967777371267,34.6280784892901,0,0,0,0,0,0,0,0,22.1257231428597,33.4809603217,0,5.38209809820247,2.22946743433092,15.9347517777521,17.4701413326814,33.6006980464456,1.43293636324557,11.0440896635306,38.3382679165211,0.985326475791887,0.704387472105808,1.86595303986695,0.864719720501769,1.76739406796932,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.213455115606889,1.21251028578504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.6598055315179,41.3043328824767,39.4106632645636,0,0,0,45.1199612907412,21.1022023666096,16.471345152714,27.7664526841195,12.771747096038,0,0,0,0,0.270946437543853,3.01013864312912,42.8192138715664,76.4589928214426,9.40273969833149,0,0,0,0.328014645699706,0.325378394664303,11.0253882463063,0,0,39.0500565837397,44.2040967304834,0,0,0,0,0,0,0,0,0,21.3217540815662,23.2549981511778,22.8426755365306,30.1450186949539,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,30.5024097339873,38.2072297055399,42.4674840959158,8.84951727301724,50.3691286025339,74.1274492937552,68.7316737981847,30.5532122275256,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,55.1340485957321,8.9185524060345,0,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0.605399121573143,0,0,2.15068535015921,4.02616994206349,3.8375302593739,0,0,0,0,0,0,41.1709188898084,0.439524537815682,0,0,0,16.950858416376,2.37571744666111,6.14321404198464,0,0.140669416410513,0,0,14.3565277527036,4.78195171802567,25.1418363133344,9.57344441846249,0,0,0,94.9009788115771,40.9958490007145,0,4.34030984802508,0,0,0,0.0927680981618513,0,17.9695155148811,38.4823999983261,2.17499872630438,44.1518579347739,39.4093157953788,27.6573587668486,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0,47.2646493104465,11.9272900680885,0,14.0643981676717,9.15527972979676,31.3990904854603,3.19001159731919,1.83195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,35.9112177950125,100.219327646664,0,87.5830499349084,54.8436899920703,150.313415653672,0,0,0,0,0,0,10.2174681960773,22.5014311771903,0,26.0425705880598,38.7170291355724,0,0.442306057399416,0,0,0,0,0,0,19.3534491300259,0,78.275441989144,35.8652174536622,22.9836305372263,16.0748534782668,0,0,0,0,28.6117598640837,0,4.97157629717171,0,0,0.0633107959558787,58.4698634377061,35.1897220904233,39.4888040267802,1.9980960958213,65.27295897081,0,0,1.58460277786965,0,26.6334259116979,0,0,0,0,0,0.136905378891993,3.83239764200917,0,0,0.279282401272254,0,0,44.728096111774,0,0,0,0,22.1342304102162,0,0,0,0,0,0,0,6.26937279013575,10.0403788715981,9.13968743664207,23.1723108298045,41.7853055461293,0.121499113316049,21.1323853187538,34.201676967852,22.9751096031292,0,0,5.18171032762502,0,0,0,0,0,0,0,0,0,0,1.90517903781507,1.32506888912221,0,0,0,61.3189069415505,11.4262531447433,8.64623678048163,6.21358583020793,0.992332043623902,2.17372795087739,11.9356746413278,49.7906181060742,0,0,0,0,42.2475518913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| |||
|short_description=p1@ST14 | |||
}} |
Revision as of 11:15, 11 January 2014
Short description: | p1@ST14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ST14_5end |
Coexpression cluster: | C1334_Alveolar_gall_Renal_nasal_Prostate_signet_colon |
Association with transcript: | 0bp_to_NM_021978, uc001qfw.2_5end |
EntrezGene: | ST14 |
HGNC: | 11344 |
UniProt: | Q9Y5Y6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.06e-22 | 42 |
epithelial cell | 3.03e-22 | 253 |
endodermal cell | 1.37e-17 | 58 |
epithelial cell of alimentary canal | 1.90e-11 | 20 |
respiratory epithelial cell | 3.91e-10 | 13 |
epithelial cell of tracheobronchial tree | 1.97e-07 | 9 |
epithelial cell of lower respiratory tract | 1.97e-07 | 9 |
general ecto-epithelial cell | 3.83e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.36e-24 | 160 |
endoderm | 2.36e-24 | 160 |
presumptive endoderm | 2.36e-24 | 160 |
digestive system | 1.94e-20 | 145 |
digestive tract | 1.94e-20 | 145 |
primitive gut | 1.94e-20 | 145 |
subdivision of digestive tract | 1.62e-18 | 118 |
endo-epithelium | 4.53e-13 | 82 |
respiratory system | 1.73e-11 | 74 |
epithelial bud | 1.66e-10 | 37 |
foregut | 3.21e-10 | 87 |
trunk region element | 3.46e-10 | 101 |
thoracic cavity element | 2.41e-09 | 34 |
thoracic cavity | 2.41e-09 | 34 |
renal system | 2.87e-09 | 48 |
orifice | 4.96e-09 | 36 |
urinary system structure | 7.07e-09 | 47 |
thoracic segment organ | 7.15e-09 | 35 |
gastrointestinal system | 1.01e-08 | 25 |
epithelial fold | 1.63e-08 | 47 |
respiratory tract | 2.82e-08 | 54 |
subdivision of trunk | 8.16e-08 | 112 |
intestine | 1.27e-07 | 17 |
lung | 2.88e-07 | 22 |
respiratory tube | 2.88e-07 | 22 |
respiration organ | 2.88e-07 | 22 |
pair of lungs | 2.88e-07 | 22 |
lung primordium | 2.88e-07 | 22 |
lung bud | 2.88e-07 | 22 |
thoracic segment of trunk | 5.76e-07 | 52 |
respiratory system epithelium | 9.76e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.38e-16 | 106 |
squamous cell carcinoma | 9.76e-12 | 14 |
cell type cancer | 2.76e-09 | 143 |
adenocarcinoma | 7.31e-09 | 25 |