FFCP PHASE1:Hg19::chr12:13367773..13367789,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:13367773..13367789,+ | |||
|id=chr12:13367773..13367789,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.56e-12!180;CL:0000057!5.20e-10!75;CL:0000723!2.84e-09!436;CL:0000048!2.91e-09!430;CL:0002371!1.19e-08!591;CL:0002057!1.76e-08!42;CL:0000034!1.82e-08!444;CL:0000860!1.85e-07!45;CL:0000548!2.12e-07!679;CL:0000004!2.12e-07!679;CL:0000255!2.12e-07!679;CL:0000012!5.54e-07!682;CL:0000144!7.05e-07!625;CL:0002194!7.28e-07!63;CL:0000576!7.28e-07!63;CL:0000040!7.28e-07!63;CL:0000559!7.28e-07!63;CL:0002620!8.99e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.42e-21;33!CL:0002057;2.42e-21;33!CL:0000473;1.55e-17;39!CL:0000234;1.55e-17;39!CL:0000576;3.90e-09;48!CL:0002334;1.33e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.72e-16,42;CL:0002057,1.72e-16,42;CL:0000473,3.41e-16,48;CL:0000234,3.41e-16,48;CL:0000048,1.15e-13,427;CL:0000723,1.39e-13,433;CL:0000034,8.04e-13,441;CL:0002194,2.44e-12,59;CL:0000576,2.44e-12,59;CL:0000040,2.44e-12,59;CL:0000559,2.44e-12,59;CL:0002009,1.13e-11,61;CL:0000134,3.05e-10,354;CL:0000839,3.36e-10,66;CL:0002320,4.55e-10,361;CL:0000557,6.20e-10,67;CL:0000219,3.77e-09,386;CL:0000766,1.01e-08,72;CL:0002334,1.04e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002057;5.69e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.38e-09!167;UBERON:0000468!3.43e-07!659;UBERON:0000926!9.40e-07!448;UBERON:0004120!9.40e-07!448;UBERON:0006603!9.40e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.16e-09,371;UBERON:0002204,5.57e-09,167;UBERON:0002371,1.40e-08,76;UBERON:0001434,1.83e-08,100;UBERON:0001474,3.61e-08,82;UBERON:0000926,3.92e-08,315;UBERON:0004120,3.92e-08,315;UBERON:0006603,3.92e-08,315;UBERON:0004765,2.22e-07,90;UBERON:0002405,8.41e-07,93 | |||
|phase1_expression=1.09007027562334,2.78330681058278,1.26858963686374,4.00293193412522,0.446961094427288,2.61701557230111,0,0.631719873426831,0,0.245733936501509,0,0.655324116390517,0.527533956456907,0.123766352960047,1.32558950291166,1.34465029290355,1.80808358407193,0.730310090387373,0.975865597581014,0.492484232307152,0,0.313454721478088,0,0.821246550437305,0.627713197974014,0,0,0,0,0,0.464448369948228,0,0,0.739508020333575,0,0,0,0,0.601633342410425,0,0.223915474239924,0.32389366601898,0,1.89017710413434,1.51150377475524,1.69808842831471,1.85943229524548,2.87817521615278,4.02618282163635,4.02769349251011,2.0492856522328,3.31075121844019,1.37898272294647,1.29096936716765,1.35426486594342,4.51781614902251,1.36453075028923,0.674170453335254,2.44867113896722,0.320929027076094,3.83602275479425,3.29851300186716,3.98927315243264,1.70489900213078,2.32167390902867,0,3.73693349397345,7.03496262718881,6.25779502104242,2.17188844705117,1.21079900526674,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0.722878304769133,0.50133791063589,2.31754430337318,0,0,0.0945348171640679,0.221729397462564,0.351339142772504,0,0,0.370784442784429,0,0.174129737299267,0.26591592103773,0,0,0,0,0.860234595106124,0.694281003215189,0,0,2.47606237746061,1.25396979922086,1.55050055501597,0.35576626268671,1.00416183829401,0,0,0.732186172644509,0,0.81014194788176,0.267899184852239,0.673588117878509,0.112611480483322,0,0,1.09921046358244,0,0,0,1.49091585508596,0.379891534993739,0.264818361626438,1.14734648299525,0.354668382198357,0,0,0,0,1.21239604862719,1.14423332179421,0.151357427644931,0,0.234321431833797,2.18512053781224,1.1409436430889,4.63290909710583,1.64408298101271,1.61872944368132,0.98315564691574,2.04154171254893,1.84251475967652,1.44656093646072,0,1.48360157567134,0.910161361938026,0,0.505008341862199,2.12701483782339,0.277064115484183,0.877955241761676,1.22595118319608,0,0.226864366320042,0.717558542755448,0.85422955527427,1.05965950579781,0.600182192168805,0.618315175430633,0.515281080091258,0.744467425326359,1.35021065793013,0.876933046450788,0.252433774244115,0.828449087780694,0.646584227275248,0,0.403008392910561,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,3.85944562915731,0,4.17931135228781,0.721879481669586,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0.134831308160164,0,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0.122988438543114,0,0,1.1240175325762,0.804231779293047,0.185176890317059,0,0,0,0.231860809950154,0,0.577465791044295,0,0.761016608938393,0,0,0.492434012174795,0.468008530278475,0.594524649154913,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0.144119953416961,0.12624243342638,0.317489471460845,0.381988425558278,0,1.71072446022705,1.64523988325318,0.300343057843917,1.42913216315289,0.224262168690721,0.87192013766656,0.5867062865676,0,0,1.690605505112,0.531876233169741,0,0.514414748524284,0,0,0.142977993658148,1.08524321078289,0.823240336780769,0.325736184293735,0,0.791951872933429,0,0,0.299918973546171,1.2162378064119,0.502257091432126,6.32501818449095,0,0,0,0.723906533337896,2.67119219315498,0.179060963239896,0,0,0,0,1.01637849688985,0,2.31986643833309,0.335032530668698,6.37938751653163,0,0,0,0.36807447515742,0,0.271265023699736,1.03985430765404,3.39015078714607,0.315404830067869,0.937131319941706,0,0,2.0694614258501,0,0.368738337083406,0.868836144680828,0,0,0,0,0.106727557803444,0.303127571446259,0,1.20956117331872,1.48864684691266,0.306923946576125,3.08726103876381,1.15325234330131,0.511707249066704,1.28683136914886,1.48418066444991,1.54209693802656,1.24293207719189,0.164254312027618,1.55776328755086,1.74315567689939,0,0,0.644566922551274,0.34444334449382,1.82091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.211103257785751,2.27466768141793,1.36074964221213,0,0,0,0,0.764628819135115,1.66215201785745,0,0,0,0,0,0.650756789328606,0,0,0,0,0,0,0.096670718292122,1.84858340537573,1.68854042198743,2.75673144969061,0.859361958946189,1.59518363305651,1.61930592090592,0.267096106940212,0,0,0,0,0,0.94443704049192,0.6970372701606,0.308033580176089,0,0,0.18532421910392,0.429374660225974,0.372158369359667,0,0.190630193923825,0,0.42793898803392,0.95460974377781,2.35484592059769,0.179872457583315,0.54907405947211,0.589062011728432,0,0,0.421258456238981,0,2.92456187557541,2.11300293513511,0.272999822815972,0.282810863907425,2.26016233240486,0,0.66343897524122,0.438450885253763,0,1.9676842561399,0.405820753925408,0,1.12678241012897,0,0,0.35667105148125,0,1.89996871767898,2.96365403663912,0,0.699869440489966,0.0962221127255121,0,0,0.188287601553558,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,5.12755541411871,1.92495971052672,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.439524537815682,0,0,0.568272293612826,5.25237866422918,0.296964680832639,4.60741053148848,0.994147647766298,0.140669416410513,0.77916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| |||
|short_description=p@chr12:13367773..13367789,+ | |||
}} |
Revision as of 12:21, 11 January 2014
Short description: | p@chr12:13367773..13367789, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:13367773..13367789, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.72e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.72e-16 | 42 |
defensive cell | 3.41e-16 | 48 |
phagocyte | 3.41e-16 | 48 |
multi fate stem cell | 1.15e-13 | 427 |
somatic stem cell | 1.39e-13 | 433 |
stem cell | 8.04e-13 | 441 |
monopoietic cell | 2.44e-12 | 59 |
monocyte | 2.44e-12 | 59 |
monoblast | 2.44e-12 | 59 |
promonocyte | 2.44e-12 | 59 |
macrophage dendritic cell progenitor | 1.13e-11 | 61 |
mesenchymal cell | 3.05e-10 | 354 |
myeloid lineage restricted progenitor cell | 3.36e-10 | 66 |
connective tissue cell | 4.55e-10 | 361 |
granulocyte monocyte progenitor cell | 6.20e-10 | 67 |
motile cell | 3.77e-09 | 386 |
myeloid leukocyte | 1.01e-08 | 72 |
preadipocyte | 1.04e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.16e-09 | 371 |
musculoskeletal system | 5.57e-09 | 167 |
bone marrow | 1.40e-08 | 76 |
skeletal system | 1.83e-08 | 100 |
bone element | 3.61e-08 | 82 |
mesoderm | 3.92e-08 | 315 |
mesoderm-derived structure | 3.92e-08 | 315 |
presumptive mesoderm | 3.92e-08 | 315 |
skeletal element | 2.22e-07 | 90 |
immune system | 8.41e-07 | 93 |