FFCP PHASE1:Hg19::chr12:16737244..16737274,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:16737244..16737274,- | |||
|id=chr12:16737244..16737274,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.50e-14;1!UBERON:0010122;6.35e-08;2!UBERON:0007297;6.35e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;1.50e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,2.41e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0002020!1.55e-36!34;UBERON:0003528!1.55e-36!34;UBERON:0001893!2.27e-33!34;UBERON:0001869!7.24e-33!32;UBERON:0002791!8.00e-32!33;UBERON:0002780!4.09e-29!41;UBERON:0001890!4.09e-29!41;UBERON:0006240!4.09e-29!41;UBERON:0003080!2.90e-28!42;UBERON:0002619!1.36e-26!22;UBERON:0001049!2.11e-26!57;UBERON:0005068!2.11e-26!57;UBERON:0006241!2.11e-26!57;UBERON:0007135!2.11e-26!57;UBERON:0001950!4.77e-26!20;UBERON:0007023!9.95e-26!115;UBERON:0002616!3.07e-25!59;UBERON:0000955!1.72e-23!69;UBERON:0006238!1.72e-23!69;UBERON:0001017!2.47e-23!82;UBERON:0000956!5.84e-23!25;UBERON:0000203!5.84e-23!25;UBERON:0002346!1.69e-22!90;UBERON:0005743!7.83e-22!86;UBERON:0000073!2.85e-20!94;UBERON:0001016!2.85e-20!94;UBERON:0003075!5.16e-19!86;UBERON:0007284!5.16e-19!86;UBERON:0003056!2.21e-17!61;UBERON:0002420!1.87e-16!9;UBERON:0007245!1.87e-16!9;UBERON:0010009!1.87e-16!9;UBERON:0010011!1.87e-16!9;UBERON:0000454!1.87e-16!9;UBERON:0002308!1.11e-15!9;UBERON:0000125!1.11e-15!9;UBERON:0001871!2.84e-14!7;UBERON:0000153!2.06e-12!129;UBERON:0007811!2.06e-12!129;UBERON:0009663!5.40e-12!7;UBERON:0000033!1.48e-11!123;UBERON:0000924!6.89e-11!173;UBERON:0006601!6.89e-11!173;UBERON:0004121!6.61e-09!169;UBERON:0002771!2.51e-08!3;UBERON:0002021!4.35e-08!5;UBERON:0000349!4.77e-08!5;UBERON:0000025!5.14e-08!194;UBERON:0006331!3.65e-07!3;UBERON:0004111!8.81e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;2.73e-27;2!UBERON:0000998;1.50e-14;1!UBERON:0006868;1.50e-14;1!UBERON:0002346;3.60e-14;4!UBERON:0000923;3.60e-14;4!UBERON:0010316;3.60e-14;4!UBERON:0005291;3.60e-14;4!UBERON:0002050;1.58e-11;5!UBERON:0005423;1.58e-11;5!UBERON:0001950;1.67e-10;20!UBERON:0000200;9.25e-10;6!UBERON:0002619;1.30e-09;22!UBERON:0003528;5.62e-09;34!UBERON:0002020;5.62e-09;34!UBERON:0000956;1.58e-08;25!UBERON:0000203;1.58e-08;25!UBERON:0001871;1.71e-08;6!UBERON:0000922;2.39e-08;49!UBERON:0002791;6.03e-08;32!UBERON:0001873;6.35e-08;2!UBERON:0001869;7.41e-08;32!UBERON:0001893;4.27e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,5.34e-27,2;UBERON:0000998,1.23e-14,1;UBERON:0006868,1.23e-14,1;UBERON:0001950,1.91e-10,20;UBERON:0002791,4.22e-10,32;UBERON:0001869,4.22e-10,32;UBERON:0000200,1.15e-09,6;UBERON:0002619,1.48e-09,22;UBERON:0003528,1.61e-09,34;UBERON:0002020,1.61e-09,34;UBERON:0001893,1.61e-09,34;UBERON:0000956,1.77e-08,25;UBERON:0000203,1.77e-08,25;UBERON:0001871,2.07e-08,6;UBERON:0001873,4.69e-08,2;UBERON:0010122,4.69e-08,2;UBERON:0002780,6.39e-08,41;UBERON:0001890,6.39e-08,41;UBERON:0003080,6.39e-08,41;UBERON:0006240,6.39e-08,41;UBERON:0001017,2.35e-07,81;UBERON:0002346,5.92e-07,86 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0,0,0,0,0,0,0,0.773288812777695,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11481905075431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0.984685914873589,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.583209226766509,0,0,1.32656082487949,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0.600420288709789,0.684526894459965,0,0,0,0,0.458320848023367,0.717873024576814,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.427149650270779,0,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,1.22026264901963,0.250381861413,0,0.221858103073705,0.0620964029413835,2.49027542885215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.678930119816101,1.2754495206101,1.23935764259002,0,0,0,0,0,0,0.128458450192919,0,0.957803154342908,0.615349092722265,4.78936222821264,0.0691572524642179,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0.620060389503552,0,2.18789923607288,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0.590969204419841,0,0,0.785577949580009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980593287015622,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,1.74540276136151,0,0,0,0,0,0,0.633492505057185,0,0,0,0.250707539292375,0.0757786982182394,0,0,0.310298987585686,0,0.23806443146374,0,0.124149428591716,0,0.190941474834495,1.0105859447911,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr12:16737244..16737274,- | |||
}} |
Revision as of 12:29, 11 January 2014
Short description: | p@chr12:16737244..16737274, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:16737244..16737274, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 5.34e-27 | 2 |
seminal vesicle | 1.23e-14 | 1 |
seminal fluid secreting gland | 1.23e-14 | 1 |
neocortex | 1.91e-10 | 20 |
regional part of telencephalon | 4.22e-10 | 32 |
cerebral hemisphere | 4.22e-10 | 32 |
gyrus | 1.15e-09 | 6 |
regional part of cerebral cortex | 1.48e-09 | 22 |
brain grey matter | 1.61e-09 | 34 |
gray matter | 1.61e-09 | 34 |
telencephalon | 1.61e-09 | 34 |
cerebral cortex | 1.77e-08 | 25 |
pallium | 1.77e-08 | 25 |
temporal lobe | 2.07e-08 | 6 |
caudate nucleus | 4.69e-08 | 2 |
future caudate nucleus | 4.69e-08 | 2 |
regional part of forebrain | 6.39e-08 | 41 |
forebrain | 6.39e-08 | 41 |
anterior neural tube | 6.39e-08 | 41 |
future forebrain | 6.39e-08 | 41 |
central nervous system | 2.35e-07 | 81 |
neurectoderm | 5.92e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 2.41e-14 | 1 |