FFCP PHASE1:Hg19::chr12:24737089..24737109,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144360 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=26557 | |||
|TSSclassifier=strong | |||
|UniProt=Q96M19 | |||
|association_with_transcript=0bp_to_ENST00000483544,NR_029451,uc001rgb.1_5end | |||
|coexpression_cluster_id=C132 | |||
|description=CAGE_peak_1_at_LINC00477_5end | |||
|id=chr12:24737089..24737109,- | |||
|ontology_enrichment_celltype=CL:0001014!6.31e-07!2;CL:0001016!6.31e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0001014;1.55e-36;2!CL:0001016;1.55e-36;2!CL:0000453;2.80e-15;5!CL:0000840;6.70e-13;5!CL:0000990;6.48e-09;8!CL:0000451;1.87e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.70e-36,2;CL:0001016,1.70e-36,2;CL:0000453,2.90e-15,5;CL:0000840,6.90e-13,5;CL:0001029,6.90e-13,5;CL:0000990,6.61e-09,8;CL:0000763,7.85e-08,108;CL:0000049,7.85e-08,108;CL:0000451,1.90e-07,10;CL:0002009,2.20e-07,61;CL:0000557,9.88e-07,67 | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.28e-19;1!UBERON:0009117;3.97e-08;10!UBERON:0005564;3.97e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;2.77e-14;31!DOID:1240;2.46e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.70e-15,31;DOID:1240,8.12e-12,39;DOID:2531,4.76e-09,51;DOID:0060083,4.76e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.49e-35!115;UBERON:0002780!8.90e-24!41;UBERON:0001890!8.90e-24!41;UBERON:0006240!8.90e-24!41;UBERON:0003080!4.41e-23!42;UBERON:0001049!5.99e-23!57;UBERON:0005068!5.99e-23!57;UBERON:0006241!5.99e-23!57;UBERON:0007135!5.99e-23!57;UBERON:0002616!4.76e-20!59;UBERON:0001893!6.63e-19!34;UBERON:0001869!5.30e-18!32;UBERON:0000955!1.50e-17!69;UBERON:0006238!1.50e-17!69;UBERON:0002791!1.81e-17!33;UBERON:0003075!7.32e-17!86;UBERON:0007284!7.32e-17!86;UBERON:0005743!1.06e-16!86;UBERON:0001017!1.61e-16!82;UBERON:0002346!8.80e-16!90;UBERON:0003056!1.28e-15!61;UBERON:0001950!5.02e-15!20;UBERON:0002020!8.53e-15!34;UBERON:0003528!8.53e-15!34;UBERON:0000073!1.94e-14!94;UBERON:0001016!1.94e-14!94;UBERON:0002619!1.79e-13!22;UBERON:0000956!1.34e-11!25;UBERON:0000203!1.34e-11!25;UBERON:0000200!2.43e-10!6;UBERON:0000153!9.93e-09!129;UBERON:0007811!9.93e-09!129;UBERON:0000033!1.22e-08!123;UBERON:0004121!7.33e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;4.28e-19;1!UBERON:0001153;4.28e-19;1!UBERON:0009854;4.28e-19;1!UBERON:0000473;6.20e-10;8!UBERON:0003135;1.81e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,5.62e-19,1;UBERON:0001153,5.62e-19,1;UBERON:0001045,5.62e-19,1;UBERON:0000473,6.06e-10,8;UBERON:0003135,1.78e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0.112328631146495,0,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.9766204991099,0.687010689511529,26.4227057305274,23.7096674365961,21.85723756426,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,13.3008816258987,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0.202203398942031,0,0.702793337176017,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.633107959558787,0,0.881747022766871,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,2.32140586367385,0.485996453264197,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.3755727921195,0,0.776503360757966,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.642292250964595,0,0.319267718114302,0.82046545696302,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.339848664884159,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,1.21245917149183,3.21556956187414,0.829169439458779,0.413731983447581,0.213233981900981,0,0,0,0,0,0,0,0,0.134704106029175,0.0717222053926763,0.99798106963804,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p1@LINC00477 | |||
}} |
Revision as of 12:40, 11 January 2014
Short description: | p1@LINC00477 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINC00477_5end |
Coexpression cluster: | C132_acute_small_Dendritic_Macrophage_CD14_Neutrophils_Monocytederived |
Association with transcript: | 0bp_to_ENST00000483544, NR_029451, uc001rgb.1_5end |
EntrezGene: | LINC00477 |
HGNC: | 26557 |
UniProt: | Q96M19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.70e-36 | 2 |
immature CD1a-positive Langerhans cell | 1.70e-36 | 2 |
Langerhans cell | 2.90e-15 | 5 |
immature conventional dendritic cell | 6.90e-13 | 5 |
common dendritic progenitor | 6.90e-13 | 5 |
conventional dendritic cell | 6.61e-09 | 8 |
myeloid cell | 7.85e-08 | 108 |
common myeloid progenitor | 7.85e-08 | 108 |
dendritic cell | 1.90e-07 | 10 |
macrophage dendritic cell progenitor | 2.20e-07 | 61 |
granulocyte monocyte progenitor cell | 9.88e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 5.62e-19 | 1 |
caecum | 5.62e-19 | 1 |
midgut | 5.62e-19 | 1 |
testis | 6.06e-10 | 8 |
male reproductive organ | 1.78e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.70e-15 | 31 |
leukemia | 8.12e-12 | 39 |
hematologic cancer | 4.76e-09 | 51 |
immune system cancer | 4.76e-09 | 51 |