FFCP PHASE1:Hg19::chr12:28124161..28124192,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5744 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9607 | |||
|TSSclassifier=strong | |||
|UniProt=P12272 | |||
|association_with_transcript=-290bp_to_J03580_5end | |||
|coexpression_cluster_id=C1359 | |||
|description=CAGE_peak_9_at_PTHLH_5end | |||
|id=chr12:28124161..28124192,- | |||
|ontology_enrichment_celltype=CL:0002076!3.88e-11!43;CL:0002159!4.91e-10!13;CL:0002368!1.09e-09!13;CL:0000223!3.69e-08!59;CL:0002166!8.67e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002368;4.39e-21;13!CL:0002166;2.78e-19;3!CL:0002621;1.06e-18;3!CL:0002159;3.24e-15;14!CL:0002076;2.22e-13;42!CL:0002202;1.41e-10;9!CL:0002632;1.41e-10;9!CL:0000307;6.33e-09;3!CL:0002328;1.50e-08;3!CL:0002591;1.31e-07;1!CL:0000244;6.79e-07;4!CL:0000731;6.79e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,5.22e-21,13;CL:0002166,2.12e-19,3;CL:0002621,9.67e-19,3;CL:0002076,6.67e-18,42;CL:0002159,3.01e-15,14;CL:0000223,2.52e-12,58;CL:0002202,1.37e-10,9;CL:0002632,1.37e-10,9;CL:0000066,1.24e-09,253;CL:0000068,6.86e-09,3;CL:0000069,6.86e-09,3;CL:0000307,6.86e-09,3;CL:0000377,6.86e-09,3;CL:0002328,1.34e-08,3;CL:0002591,1.27e-07,1;CL:0000244,5.86e-07,4;CL:0000731,5.86e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000377;6.33e-09;3!CL:0000223;2.58e-08;58!UBERON:0006242;2.29e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.29e-07;1!DOID:1357;2.29e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.52e-07,1;DOID:1357,2.52e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000475!4.70e-11!365;UBERON:0000153!4.58e-10!129;UBERON:0007811!4.58e-10!129;UBERON:0000033!1.17e-09!123;UBERON:0000467!1.23e-08!625;UBERON:0000480!1.42e-08!626;UBERON:0000468!1.49e-08!659;UBERON:0004121!2.48e-08!169;UBERON:0002619!6.58e-08!22;UBERON:0000924!7.02e-08!173;UBERON:0006601!7.02e-08!173;UBERON:0000161!7.14e-08!35;UBERON:0000956!9.37e-08!25;UBERON:0000203!9.37e-08!25;UBERON:0001869!1.62e-07!32;UBERON:0001950!1.73e-07!20;UBERON:0000922!2.04e-07!612;UBERON:0004119!4.44e-07!169;UBERON:0000925!4.44e-07!169;UBERON:0006595!4.44e-07!169;UBERON:0001004!5.23e-07!72;UBERON:0000923!5.34e-07!604;UBERON:0005291!5.34e-07!604;UBERON:0006598!5.34e-07!604;UBERON:0002532!5.34e-07!604;UBERON:0002050!6.07e-07!605;UBERON:0005423!6.07e-07!605;UBERON:0001893!7.10e-07!34;UBERON:0007023!9.44e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.06e-18;3!UBERON:0001708;1.35e-14;4!UBERON:0008895;1.35e-14;4!UBERON:0000486;2.39e-12;12!UBERON:0011159;8.89e-12;5!UBERON:0005911;1.22e-10;36!UBERON:0004807;3.25e-09;22!UBERON:0011137;5.00e-09;11!UBERON:0010323;5.00e-09;11!UBERON:0010371;8.51e-09;31!UBERON:0004815;1.50e-08;3!UBERON:0002031;1.50e-08;3!UBERON:0003929;2.67e-08;7!UBERON:0001764;2.29e-07;1!UBERON:0001825;2.29e-07;1!UBERON:0003350;2.58e-07;8!UBERON:0001828;2.58e-07;8!UBERON:0002135;5.03e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,9.67e-19,3;UBERON:0010188,6.43e-17,6;UBERON:0002539,6.43e-17,6;UBERON:0008816,6.43e-17,6;UBERON:0001708,1.10e-14,4;UBERON:0008895,1.10e-14,4;UBERON:0011159,7.56e-12,5;UBERON:0001004,6.38e-11,74;UBERON:0004807,1.14e-09,28;UBERON:0004119,2.75e-09,160;UBERON:0000925,2.75e-09,160;UBERON:0006595,2.75e-09,160;UBERON:0010323,4.41e-09,11;UBERON:0004815,1.34e-08,3;UBERON:0002031,1.34e-08,3;UBERON:0005911,3.66e-08,82;UBERON:0003102,1.12e-07,99;UBERON:0000065,2.21e-07,54;UBERON:0003350,2.50e-07,8;UBERON:0001828,2.50e-07,8;UBERON:0001764,2.52e-07,1;UBERON:0001825,2.52e-07,1;UBERON:0000033,2.65e-07,56;UBERON:0011137,3.78e-07,14;UBERON:0002135,3.85e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,1.204823675113,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35214253015937,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0,2.12586938479627,2.72746120590835,2.58124135850103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49976170175365,2.24803506515239,0.201057944823262,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68669169933885,3.35964256397719,2.83550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0.248107807818777,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,2.6065841139427,0.920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0,0,0,2.14870389969272,0.960950336825531,1.65896526242959,1.0115778085555,0,0,0,0.616067160352178,0,0,0,0.143124886741991,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,1.46228093778771,0,0,0.141405431953713,3.39024349860728,1.10273068709225,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,1.34060455107157,3.26672954583968,0,1.72202149068492,3.36942951335251,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14870036263921,0,0.921482106297696,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0.409074730008619,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.316553979779393,0,0.721429382263803,2.34798294213288,3.59657297247834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,1.27668251554036,0,0,0,0,2.19875734750328,0,0.244052529803926,0.250381861413,0,0.221858103073705,0.124192805882767,0,0.624902039810533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0.414706207840855,0,0,0.150257608997218,0,0.406870733204662,0,0.214821114084977,0.464033759878494,0.796191777397232,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.839277046316667,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.615349092722265,0,0.138314504928436,0,0,0,0.943757786781923,0.917142992608395,0.115525666150338,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0,0.126831620387814,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0.197318320688547,0,1.11231401892069,0,0,0,0,2.15927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0.0852134047591577,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84016678932464,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0.0939839179798536,0,0,0.357107877211315,0,0,0,0,0,0.473314686579554,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0,0.217716747896961,0,0.202056159043763,0.0717222053926763,0.332660356546013,0.162806537221949,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |||
|short_description=p9@PTHLH | |||
}} |
Revision as of 12:49, 11 January 2014
Short description: | p9@PTHLH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PTHLH_5end |
Coexpression cluster: | C1359_acantholytic_Mallassezderived_maxillary_renal_gastric_amniotic_Prostate |
Association with transcript: | -290bp_to_J03580_5end |
EntrezGene: | PTHLH |
HGNC: | 9607 |
UniProt: | P12272 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 5.22e-21 | 13 |
epithelial cell of Malassez | 2.12e-19 | 3 |
gingival epithelial cell | 9.67e-19 | 3 |
endo-epithelial cell | 6.67e-18 | 42 |
general ecto-epithelial cell | 3.01e-15 | 14 |
endodermal cell | 2.52e-12 | 58 |
epithelial cell of tracheobronchial tree | 1.37e-10 | 9 |
epithelial cell of lower respiratory tract | 1.37e-10 | 9 |
epithelial cell | 1.24e-09 | 253 |
duct epithelial cell | 6.86e-09 | 3 |
branched duct epithelial cell | 6.86e-09 | 3 |
tracheal epithelial cell | 6.86e-09 | 3 |
tracheoblast | 6.86e-09 | 3 |
bronchial epithelial cell | 1.34e-08 | 3 |
smooth muscle cell of the pulmonary artery | 1.27e-07 | 1 |
transitional epithelial cell | 5.86e-07 | 4 |
urothelial cell | 5.86e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 9.67e-19 | 3 |
protuberance | 6.43e-17 | 6 |
pharyngeal arch | 6.43e-17 | 6 |
embryonic head | 6.43e-17 | 6 |
jaw skeleton | 1.10e-14 | 4 |
splanchnocranium | 1.10e-14 | 4 |
primary subdivision of cranial skeletal system | 7.56e-12 | 5 |
respiratory system | 6.38e-11 | 74 |
respiratory system epithelium | 1.14e-09 | 28 |
endoderm-derived structure | 2.75e-09 | 160 |
endoderm | 2.75e-09 | 160 |
presumptive endoderm | 2.75e-09 | 160 |
cranial skeletal system | 4.41e-09 | 11 |
lower respiratory tract epithelium | 1.34e-08 | 3 |
epithelium of bronchus | 1.34e-08 | 3 |
endo-epithelium | 3.66e-08 | 82 |
surface structure | 1.12e-07 | 99 |
respiratory tract | 2.21e-07 | 54 |
epithelium of mucosa | 2.50e-07 | 8 |
gingiva | 2.50e-07 | 8 |
maxillary sinus | 2.52e-07 | 1 |
paranasal sinus | 2.52e-07 | 1 |
head | 2.65e-07 | 56 |
axial skeletal system | 3.78e-07 | 14 |
mitral valve | 3.85e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.52e-07 | 1 |
maxillary sinus cancer | 2.52e-07 | 1 |