FFCP PHASE1:Hg19::chr12:50616353..50616362,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51474 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24636 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-85bp_to_uc001rwh.3_5end | |||
|description=CAGE_peak_5_at_LIMA1_5end | |||
|id=chr12:50616353..50616362,- | |||
|ontology_enrichment_celltype=CL:0000057!4.64e-13!75;CL:0000055!9.25e-12!180;CL:0002620!9.92e-10!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.18e-13;23!CL:0000057;7.77e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.80e-17,76;CL:0002620,1.36e-13,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.97e-10;5!DOID:450;5.97e-10;5!DOID:66;5.97e-10;5!DOID:423;5.97e-10;5!DOID:0080000;5.97e-10;5!DOID:11722;5.97e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.55e-10,5;DOID:450,6.55e-10,5;DOID:66,6.55e-10,5;DOID:423,6.55e-10,5;DOID:0080000,6.55e-10,5;DOID:11722,6.55e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!3.41e-13!95;UBERON:0002199!8.56e-10!45;UBERON:0002416!8.56e-10!45;UBERON:0002097!6.86e-09!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;3.95e-09;46!UBERON:0002416;3.95e-09;46!UBERON:0002097;1.10e-08;41!UBERON:0001828;2.50e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.03e-13,99;UBERON:0002199,1.18e-11,46;UBERON:0002416,1.18e-11,46;UBERON:0002097,2.89e-11,41;UBERON:0001828,1.10e-07,8 | |||
|phase1_expression=0.181678379270557,0.428201047781966,1.26858963686374,2.00146596706261,0,0,0,0.631719873426831,1.04474251279935,0,0,0,0.263766978228454,0.990130823680373,0.662794751455832,1.34465029290355,1.20538905604795,0,0.975865597581014,0.123121058076788,0,0,0.572471974262113,0.136874425072884,0.627713197974014,0.0764134057479513,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.25618263945135,0.130059347559878,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0.255973222308837,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.639312809217652,1.0843174571537,0,2.02785126545153,0,1.45990461090791,0.0945348171640679,0.221729397462564,0.175669571386252,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0,0,0,0.71153252537342,0,0.402829317109147,0.760272105718513,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,1.49091585508596,0.506522046658319,9.40105183773854,1.72101972449288,0.354668382198357,0.560677600142307,0,1.48000529050296,2.17847724779836,0,0,0,0,0,0.312160076830321,0,0.448346041655403,0,0.161872944368132,0.280901613404497,1.63323337003915,0.122834317311768,0.413303124703062,11.8800285728205,3.95627086845691,0,0,0.336672227908132,0.125118519871964,1.93944880838928,0.438977620880838,1.22595118319608,2.25357088359895,0.340296549480063,4.12596162084383,3.84403299873421,2.33125091275518,2.10063767259082,5.46178404963726,1.8034837803194,2.04728541964749,2.70042131586026,1.65642908774038,4.03894038790583,4.41839513483037,1.61646056818812,1.06502877754984,0.201504196455281,1.01736355386293,1.54608682530637,1.90922284413584,2.86804595389004,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,2.3218396401599,1.44375896333917,0.236613600079688,0,0,0.330881918197182,0.217879444092406,0,0,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0.686271241194102,2.19500570817251,1.1240175325762,0.603173834469785,0.185176890317059,0,0,0,0,0.117408694235822,0.288732895522148,0,0.380508304469197,0,0,0,0,0,1.87467667973554,0.671928512795438,1.84307626415102,0.716468181622786,0.581267877027924,0.383382679165211,0.492663237895943,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0.1466765716419,1.80980402060889,0,0.845302752556,1.06375246633948,0,0,0,0,0.714889968290738,0,0,0.65147236858747,0,0,6.02878754119172,1.74306691720059,3.09916272664377,0,0,0,0.718874566474748,1.14861935834114,0,1.59259437334337,0.61642896765115,0.895304816199478,0,0,0,0,1.27047312111232,0,0,0,0,0,0,0,0.981531933753119,0,0.813795071099207,1.66376689224646,3.56857977594324,3.6271555457805,1.17141414992713,2.10662269809403,0,0,1.32845119707087,0.184369168541703,2.17209036170207,0,0,0,0,0,0,0,0.30239029332968,1.48864684691266,1.99500565274481,0.841980283299221,1.28139149255701,3.58195074346692,0.160853921143607,1.48418066444991,1.69630663182921,0.532685175939381,0.574890092096664,0,0.581051892299796,0,1.80455823272956,0.368323955743585,0.918515585316854,2.91345868810747,1.44236856455367,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0.165018999841176,0.574265537996172,1.30012049207304,3.21367859688319,0.96670718292122,0,0,0.137836572484531,0.537101224341368,0,0,1.4245125703478,0.991709492165869,1.53752053892085,1.02090169995667,0.4046311234222,0,3.1481234683064,0,1.54016790088044,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0.632758849437452,0.762520775695299,0,1.71175595213568,0,0,2.33834194858309,0,0.824686816419805,0.606547444719948,0,0.421258456238981,0.48763373908959,1.46228093778771,0,0.682499557039929,0.565621727814851,0,0,0,0,0,1.31178950409327,0.608731130888112,0,0,0.286822704408103,0.491245205065606,0.35667105148125,0.354761064070598,1.89996871767898,1.97576935775941,0,0.349934720244983,0.384888450902048,1.34060455107157,0,0,0,0,0,2.29723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0,0,0,0,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,3.69376990848337,0.23874448473769,0,0.307160702099232,0,0,0.890469640183247,0,0,0,0,0,0.715880777515084,0,0.622079175323615,0,0,0.511572370226872,0.887790650732402,0,3.33410970433911,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0.139423744278603,1.38510465306835,1.25336261431701,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0.421996129056054,0.326465616318295,0,0.649165919226273,0,0.176915129006678,0,0.889563386041866,0.123563938946503,0.208843899010911,0,0,0,0,0.391329237864179,0.242780379534093,0,0,0.30607276163049,1.0741718536843,0.150323419414493,0,0,0,0,0,0,0,0,0.391969589657511,0.957651272384428,0.17472666824203,0.687944129886466,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0,0.586654148204409,0,0.213452994739353,0,0,0,0,0,0.745515213392595,0,0,0.313808538937,0.4079928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| |||
|short_description=p5@LIMA1 | |||
}} |
Revision as of 13:24, 11 January 2014
Short description: | p5@LIMA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LIMA1_5end |
Coexpression cluster: | NA |
Association with transcript: | -85bp_to_uc001rwh.3_5end |
EntrezGene: | LIMA1 |
HGNC: | 24636 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.80e-17 | 76 |
skin fibroblast | 1.36e-13 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.03e-13 | 99 |
integument | 1.18e-11 | 46 |
integumental system | 1.18e-11 | 46 |
skin of body | 2.89e-11 | 41 |
gingiva | 1.10e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.55e-10 | 5 |
myotonic disease | 6.55e-10 | 5 |
muscle tissue disease | 6.55e-10 | 5 |
myopathy | 6.55e-10 | 5 |
muscular disease | 6.55e-10 | 5 |
myotonic dystrophy | 6.55e-10 | 5 |