FFCP PHASE1:Hg19::chr12:68726030..68726051,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56890 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29917 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000541087,ENST00000545724_5end | |||
|description=CAGE_peak_3_at_MDM1_5end | |||
|id=chr12:68726030..68726051,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000875;3.34e-13;3!CL:0002396;3.34e-13;3!CL:0000123;6.30e-10;2!CL:0000242;6.30e-10;2!CL:0000775;9.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,1.66e-13,3;CL:0002396,1.66e-13,3;CL:0002393,2.15e-11,9;CL:0002397,2.15e-11,9;CL:0000242,5.19e-10,2;CL:0000775,9.02e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.63e-11!115;UBERON:0005743!1.18e-07!86;UBERON:0000073!2.25e-07!94;UBERON:0001016!2.25e-07!94;UBERON:0001049!3.35e-07!57;UBERON:0005068!3.35e-07!57;UBERON:0006241!3.35e-07!57;UBERON:0007135!3.35e-07!57;UBERON:0001017!9.10e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.55e-22;15!UBERON:0000179;1.55e-22;15!UBERON:0000463;1.55e-22;15!UBERON:0002390;2.41e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.73e-22,15;UBERON:0000179,1.73e-22,15;UBERON:0000463,1.73e-22,15 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0.408001382488506,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0.164201178899891,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0,0,1.70427841276664,0.284338464974843,0.587200878669695,1.10799081706375,0,0.651032612147555,0,0,0.257575567634187,0,0,0.242584061187816,0.464858073811369,0,0.929119112685311,0,0,0.47296445977717,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,1.05627643155971,0,0.209658645508376,0.336985893439485,0.150176892841506,0.48217676009124,1.42506371870624,1.59133341759272,1.64397738388171,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0,0.289803085735052,0,0,0,0.226618685395132,0,0.34362744548263,0,0,0.651083453856419,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,1.30979075497713,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0.183201743930407,1.31780417436063,0,0,0,0.12663051166458,0.264818361626438,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0.453728732640084,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0,0,0.243947412259191,0.795178609928912,0.464775771478074,0.414644220061482,0.756962552626885,0,0,0,0,0,0,0.236613600079688,0,0,0.220587945464788,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,1.7658523976586,0.122988438543114,0.514703430895577,0,0,0,0,0,0,0,0.34779121492523,0.117408694235822,0,0.462985512576611,0.190254152234598,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0.179117045405697,0,0,0.492663237895943,0.44024217006613,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,1.14861935834114,1.42636905040718,0,0,0.179060963239896,0.336255431980582,0.394061520403854,0,0.256686072559497,0,0,0,0.502548796003046,0.637938751653163,1.49801404789436,0,2.07207756718018,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0,0.195801157462741,0,1.86091223510599,0.215714200818617,0,0,0,0,0,0,0,0.256278298511402,0,0.321707842287215,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0,0.262248829918848,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0.522870902049801,0.256450125116389,0.328014645699706,0.325378394664303,0.206082023295445,0.183138929636687,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0.214840489736547,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0.573645408816206,0.0982490410131212,0,0,0.211107635297664,0.658589785919804,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,4.56702848308952,2.29391162142713,1.13929437434833,1.19115887728894,0.822724546172388,2.59389324477087,4.32025149790492,2.37937552888281,0.106824071127473,14.4371978289504,0,0.185803175125719,0.28853842595289,0.355709216742071,0.637705090915289,0.59873811429845,0.191505370132367,0.635020748171649,0.324621940274555,0.280797178113459,0.228234679033192,0.156679895773023,0,0.846458889008016,0,0.403599414382095,0.425846237690326,0,0,0,0,0.19538809540204,0.556812347790485,0,2.16364542780786,0,0,0,0.293016358543788,0.121360521749513,0,0,0.23874448473769,0,0,0.994147647766298,0.140669416410513,0.111308705022906,0.494411622680279,0.422250816255987,0,0,0.251932747854276,0.306806047506464,0,0,0,0,0,0.690503839458535,4.7896618469388,0,0,0.649376687132959,0,0,0.262379999988587,0,0,0,0,0,0,0.520874984799877,0,0.241192877250816,0,0.110579259931225,0,0,0,0.139423744278603,0.307801034015188,0.113942055847001,0.46112780877612,0,0.434589487688032,0.31900115973192,0.183195186803725,0,1.02193298195737,0.470940769185074,0.831058409500782,0,0,0.503464760927528,0.189753732724185,0.476809736941136,0,0,0.565412285735763,0.649165919226273,1.99052386215701,0.973033209536731,0,0,0,0.104421949505455,0.741412462787447,0,0.702793337176017,0,0,0.242780379534093,0,0,0,0,0.450970258243478,0.207376382794494,0,0,0,0,0,0.277349346026277,0,0,0.0870592065804026,0,0,0.19351266257817,0.146178634172371,0,0.290967049465258,8.03130752892652,0.225980740780532,0,0,0.316553979779393,0.977756913674015,0.0801588202515337,0.426905989478705,0,0.144090417154106,2.74887830798198,0.171594997861965,0,0.124252535565433,0,0,0,0.101998217636322,0.577901179803038,0,0.547621515567972,0,0,0,0.279282401272254,0,0,0.199679000498991,0.429226048136571,0,0.268733889946905,0,0,0.315132729228895,0.164831716762333,0.202210631562555,0.393709926058995,0.254019996197353,2.38568906942791,0.272406812223151,0.321506296930038,0.825236619583403,0.83088067605837,0.2249738915515,0,0.303747783290123,0,0.236417121897595,0.104909176269996,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0.738832686744051,0.340776043570843,0.113312091520126,0,0,1.29282956361551,0.52893040697076,0.171086837884329,0.704815022316672,0,0.157204305099666,0,0.496166021811951,1.97611631897944,0.852548188666271,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0.500763722825999,1.14681839138014,0.665574309221114,0.434674820589684,0.691743174681154,0,0.303298235083296,0,0,11.2400377393652,1.44921028610825,0,0,0.554805861502613,0,0,0,0.228840068396924,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0.59996218756479,0.106691729694141,0,0,0,0.139879507719444,0,0.383683113910955,1.29389773676018,0.629063767423586,0.109209638192014,0.169732529954025,0.212574920101683,0.247871528518004,0,0,0.788617450012533,0,0,0,0.385375350578757,0,0,0.41023272848151,0,0.138314504928436,0.484426936895553,0,0,0,0,0,0.381382095467167,0,0.397832444232549,0.150420656698515,0,0,0.523813388962845,0.327543835020193,0,0.135075169236789,0,0.206686796501184,0.380494861163441,0,0,0,0,0,0.535701835878287,0.672567444437648,0,1.13831095675649,0.266107110487916,0.230467975111559,0,0.679697329768317,0.131545547125698,0.118193840883968,0.222462803784138,0.235479278551542,0,0,1.82631744101899,0.215927591218621,0,0.285906176706625,0.790068058663633,4.76589844009314,12.8655121503909,0,0,0.3414369541879,0,0,0,0,0.423387050190929,0,0,0,0,0,0.121917924982269,0,0.102662806856247,0,0.485710993059139,1.16969731731053,0.397901550322736,0.118920090777569,0.11294608203896,0,0.452888530700021,0.308696632431779,0.437119121007915,1.41095188908457,0.490296643507811,1.17838273550813,0.588925401344836,0.891139200981258,1.6906229103336,0,0.563903507879121,0.257831551894309,0.299823467774787,0,0.352894871715692,0,0,0,0.430018749454354,1.41994405973866,0.203974470572744,0.436350690340377,0.5290268405154,0,0,0,0.504665699340316,0.218531143927391,0.506794004045748,0.509944148709909,0.801652215796681,0.18378979906969,0.50141507858475,2.8795905322931,2.94760543171796,0.829169439458779,0.517164979309476,0,0.23806443146374,0.258355639344024,0.620747142958579,0.224263725161227,0,0,0,0,0.0673520530145875,0.286888821570705,0.665320713092027,0.0814032686109745,0.106727345877715,0,0,0,0,0.813792356631477,0,0.402547587182052,0 | |||
|short_description=p3@MDM1 | |||
}} |
Revision as of 14:30, 11 January 2014
Short description: | p3@MDM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MDM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000541087, ENST00000545724_5end |
EntrezGene: | MDM1 |
HGNC: | 29917 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 1.66e-13 | 3 |
CD14-low, CD16-positive monocyte | 1.66e-13 | 3 |
intermediate monocyte | 2.15e-11 | 9 |
CD14-positive, CD16-positive monocyte | 2.15e-11 | 9 |
Merkel cell | 5.19e-10 | 2 |
neutrophil | 9.02e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.73e-22 | 15 |
haemolymphatic fluid | 1.73e-22 | 15 |
organism substance | 1.73e-22 | 15 |