FFCP PHASE1:Hg19::chr12:70760380..70760395,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27345 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6289 | |||
|TSSclassifier=strong | |||
|UniProt=Q86W47 | |||
|association_with_transcript=318bp_to_NM_014505,uc001svx.2_5end | |||
|coexpression_cluster_id=C1367 | |||
|description=CAGE_peak_6_at_KCNMB4_5end | |||
|id=chr12:70760380..70760395,+ | |||
|ontology_enrichment_celltype=CL:0000540!4.67e-07!6;CL:0000031!4.67e-07!6;CL:0000404!4.67e-07!6;CL:0000047!9.24e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;6.68e-18;6!CL:0000404;6.68e-18;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.47e-18,8;CL:0000540,4.17e-18,6;CL:0000031,4.17e-18,6;CL:0000404,4.17e-18,6 | |||
|ontology_enrichment_development_v019=CL:0000031;6.68e-18;6!UBERON:0006601;9.63e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.61e-31!94;UBERON:0001016!1.61e-31!94;UBERON:0001017!1.63e-31!82;UBERON:0005743!3.57e-31!86;UBERON:0001049!5.41e-29!57;UBERON:0005068!5.41e-29!57;UBERON:0006241!5.41e-29!57;UBERON:0007135!5.41e-29!57;UBERON:0002346!1.58e-25!90;UBERON:0003075!4.08e-25!86;UBERON:0007284!4.08e-25!86;UBERON:0002616!3.36e-24!59;UBERON:0000955!5.05e-23!69;UBERON:0006238!5.05e-23!69;UBERON:0007023!1.76e-21!115;UBERON:0002780!1.19e-20!41;UBERON:0001890!1.19e-20!41;UBERON:0006240!1.19e-20!41;UBERON:0001893!2.42e-20!34;UBERON:0002020!4.29e-20!34;UBERON:0003528!4.29e-20!34;UBERON:0003080!7.83e-20!42;UBERON:0002791!1.92e-19!33;UBERON:0001869!1.60e-18!32;UBERON:0000924!3.12e-18!173;UBERON:0006601!3.12e-18!173;UBERON:0004121!1.15e-17!169;UBERON:0000025!5.11e-17!194;UBERON:0003056!2.81e-16!61;UBERON:0001950!4.71e-16!20;UBERON:0002619!7.83e-16!22;UBERON:0000956!2.68e-14!25;UBERON:0000203!2.68e-14!25;UBERON:0000033!2.30e-13!123;UBERON:0000153!6.36e-13!129;UBERON:0007811!6.36e-13!129;UBERON:0004111!6.99e-13!241;UBERON:0000477!2.20e-11!286;UBERON:0003076!2.06e-10!15;UBERON:0003057!2.06e-10!15;UBERON:0004732!4.01e-09!13;UBERON:0000483!2.95e-08!309;UBERON:0000119!3.53e-08!312;UBERON:0004733!3.69e-08!12;UBERON:0002028!3.69e-08!12;UBERON:0007277!3.69e-08!12;UBERON:0002420!1.76e-07!9;UBERON:0007245!1.76e-07!9;UBERON:0010009!1.76e-07!9;UBERON:0010011!1.76e-07!9;UBERON:0000454!1.76e-07!9;UBERON:0002308!2.51e-07!9;UBERON:0000125!2.51e-07!9;UBERON:0000468!4.80e-07!659;UBERON:0000922!5.00e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.95e-47;34!UBERON:0002791;2.89e-45;32!UBERON:0003528;6.27e-45;34!UBERON:0002020;6.27e-45;34!UBERON:0001869;1.52e-44;32!UBERON:0002619;2.15e-43;22!UBERON:0001950;6.00e-43;20!UBERON:0002780;1.44e-41;41!UBERON:0001890;1.44e-41;41!UBERON:0000073;9.95e-39;53!UBERON:0002616;9.95e-39;53!UBERON:0000956;8.93e-38;25!UBERON:0000203;8.93e-38;25!UBERON:0001017;9.93e-25;75!UBERON:0000955;2.83e-24;68!UBERON:0001016;3.82e-22;83!UBERON:0002420;3.86e-20;9!UBERON:0007245;3.86e-20;9!UBERON:0010009;3.86e-20;9!UBERON:0010011;3.86e-20;9!UBERON:0000454;3.86e-20;9!UBERON:0000125;9.16e-20;9!UBERON:0002308;9.16e-20;9!UBERON:0002021;1.10e-15;5!UBERON:0001871;2.07e-15;6!UBERON:0009663;5.19e-15;7!UBERON:0004732;5.49e-13;13!UBERON:0000200;2.30e-12;6!UBERON:0002298;1.04e-11;6!UBERON:0004733;1.30e-10;12!UBERON:0002028;1.30e-10;12!UBERON:0007023;2.71e-10;114!UBERON:0001872;6.90e-10;5!UBERON:0000349;8.41e-10;5!UBERON:0011216;2.26e-09;132!UBERON:0000988;6.81e-09;3!UBERON:0005162;7.34e-08;2!UBERON:0000122;7.34e-08;2!UBERON:0001875;1.58e-07;2!UBERON:0006514;1.58e-07;2!UBERON:0002680;1.74e-07;9!UBERON:0001895;1.74e-07;9!UBERON:0002771;5.25e-07;2!UBERON:0001897;5.25e-07;2!UBERON:0010225;5.25e-07;2!UBERON:0000369;5.77e-07;4!UBERON:0002435;5.77e-07;4!UBERON:0000204;5.77e-07;4!UBERON:0001876;6.77e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.54e-77,81;UBERON:0001016,2.06e-71,89;UBERON:0001049,8.05e-71,56;UBERON:0005068,8.05e-71,56;UBERON:0006241,8.05e-71,56;UBERON:0007135,8.05e-71,56;UBERON:0000073,1.34e-67,53;UBERON:0002616,1.34e-67,53;UBERON:0002780,2.44e-58,41;UBERON:0001890,2.44e-58,41;UBERON:0003080,2.44e-58,41;UBERON:0006240,2.44e-58,41;UBERON:0001893,3.00e-57,34;UBERON:0003528,1.69e-56,34;UBERON:0002020,1.69e-56,34;UBERON:0000955,2.40e-56,68;UBERON:0006238,2.40e-56,68;UBERON:0001869,9.81e-52,32;UBERON:0002791,1.23e-51,32;UBERON:0003075,3.23e-48,82;UBERON:0007284,3.23e-48,82;UBERON:0002346,1.66e-45,86;UBERON:0002619,1.25e-43,22;UBERON:0001950,3.95e-43,20;UBERON:0003056,9.30e-40,61;UBERON:0000956,5.53e-38,25;UBERON:0000203,5.53e-38,25;UBERON:0010371,7.16e-36,104;UBERON:0004121,2.47e-33,171;UBERON:0000924,2.47e-33,171;UBERON:0006601,2.47e-33,171;UBERON:0007023,2.23e-30,114;UBERON:0010314,2.07e-29,132;UBERON:0011216,3.62e-29,223;UBERON:0002420,1.71e-20,9;UBERON:0007245,1.71e-20,9;UBERON:0010009,1.71e-20,9;UBERON:0010011,1.71e-20,9;UBERON:0000454,1.71e-20,9;UBERON:0000125,5.10e-20,9;UBERON:0002308,5.10e-20,9;UBERON:0000025,1.19e-16,192;UBERON:0002021,1.16e-15,5;UBERON:0001871,1.67e-15,6;UBERON:0009663,3.67e-15,7;UBERON:0003076,1.33e-13,15;UBERON:0003057,1.33e-13,15;UBERON:0004732,4.53e-13,13;UBERON:0000200,2.18e-12,6;UBERON:0004111,4.09e-12,240;UBERON:0002298,7.57e-12,6;UBERON:0004733,1.09e-10,12;UBERON:0002028,1.09e-10,12;UBERON:0007277,1.09e-10,12;UBERON:0000349,4.98e-10,5;UBERON:0001872,6.61e-10,5;UBERON:0000988,5.14e-09,3;UBERON:0005162,7.36e-08,2;UBERON:0000122,7.36e-08,2;UBERON:0002680,1.55e-07,9;UBERON:0001895,1.55e-07,9;UBERON:0010092,1.55e-07,9;UBERON:0001875,1.79e-07,2;UBERON:0006514,1.79e-07,2;UBERON:0000483,2.03e-07,306;UBERON:0000119,2.97e-07,309;UBERON:0001876,4.01e-07,2;UBERON:0000369,4.11e-07,4;UBERON:0002435,4.11e-07,4;UBERON:0000204,4.11e-07,4;UBERON:0010082,4.11e-07,4;UBERON:0001897,4.66e-07,2;UBERON:0010225,4.66e-07,2;UBERON:0002771,6.30e-07,2 | |||
|phase1_expression=0.54503513781167,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0,0,0.331397375727916,0,0,0,0.487932798790507,0.369363174230364,0.204000691244253,0.313454721478088,0,0.273748850145768,0,0,0,0,0,0,0.154816123316076,0,0,0,0.232401601740905,1.27952309238679,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.767175371061182,0,0,0,0,0,0.567208902984407,0.221729397462564,0.614843499851882,0.392937226493138,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0.311211035399766,0.942974704487816,1.14423332179421,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0.302256294682921,0,0,0,0,0.975789649036763,0.795178609928912,1.16193942869518,1.0366105501537,1.51392510525377,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,5.20559415430487,3.86644406388848,4.69045542936177,5.10351001322531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.979352392114111,0,0,0,0,0,0.31481234683064,0.6970372701606,0.616067160352178,0,0,0.18532421910392,0.286249773483982,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0.66343897524122,0.876901770507525,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0.0711418433484141,0.478278818186467,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0.47748896947538,0.593929361665277,0.614321404198464,1.9882952955326,3.93874365949436,0.222617410045812,0,0,0.19924798825107,0,0,0.20453736500431,0,0.311039587661807,0.179736702294654,0,0,0.197286811273867,0,0,0,3.6179558283122,15.9691038400955,0.260427761085233,0,0,0,0.762760950878299,0,0,0,0.347249989866585,0,1.80894657938112,0,1.54810963903714,1.47773809476774,3.51016635446356,0,0.278847488557207,0.230850775511391,0.341826167541004,0,0,0,0,0.732780747214898,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0.123563938946503,0,7.07711896297109,0,3.98249557733077,0.547364367646998,0,0.485560759068186,0.394584402849391,0,4.28501866282686,0.189559738885464,0,0.311064574191741,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,12.2676016101185,0.677942222341597,0.137041924646751,0,3.22885059374981,0,0,0,0.999048047910651,0.144090417154106,0,0.343189995723929,0.14405479798815,0,0.235694034616795,0,0.104602846312333,0,0,5.4037825983881,3.01191833562385,0,0,0.262887354279314,0.279282401272254,0.458320848023367,0,0.199679000498991,0.429226048136571,0,0.806201669840715,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0,0,0,2.99647493445466,1.76828463311521,1.65047323916681,2.49264202817511,0,0,3.82722206945555,0,0.236417121897595,0.367182116944987,0.211200673038813,0.35857467866569,0.383830394638891,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0,0,0,1.42211251997706,1.98348902614035,0,0,0.640724475406168,1.10043013569766,0.414239055347196,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0.314108192500469,0,2.07444650333337,1.8778639605975,1.72022758707021,0.998361463831671,3.41530216177609,0.415045904808692,0,0,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0.295710299979268,0,0.449803112163605,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.358177682162975,0,0,0.353378291891762,0,0,0.256241518587947,0,0,2.48865185073115,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,1.24415452006595,0.383683113910955,0,0.157265941855896,0.327628914576042,0.169732529954025,0.212574920101683,0,0.558644917973244,0,1.41951141002256,1.60114149657094,0,0,2.376481328569,2.8339315265117,2.07524016774297,3.89721092057435,5.04143392443436,3.38870537074668,5.00574501458738,19.9877188362816,0,0.235939446695481,0,0,0,0,0,0.225630985047772,0,0,0,0,0.295712172434091,3.57949198477492,0.781078098613847,2.68692835451539,2.09272173639893,2.7348740450911,0,0,0.175871244359621,0.383287282918786,0,0,0,0.227662191351298,0,0.115233987555779,0.171488009437418,1.56330385846713,2.36781984826257,0,0,0.156986185701028,1.72827148907602,0,0,0,0,0.285906176706625,0,4.99838129082939,1.73858272302579,0,0,0,0.691259661814092,0,0,0,0.423387050190929,0,0,0,0,0,0.121917924982269,0,0,0,0,0.233939463462106,0,0,0.45178432815584,0,0,0.154348316215889,0.218559560503957,0,0.245148321753905,0.235676547101626,1.17785080268967,0.891139200981258,1.6906229103336,0,0.0939839179798536,0.0644578879735772,0,0,0,0.401206833445841,0.730336388246517,0,2.58011249672612,0,4.01149792126397,5.67255897442491,1.0580536810308,0,0,0,1.38783067318587,2.07604586731021,0,0.203977659483963,0.26721740526556,0,0,0.227336094654718,0,1.65833887891756,4.3441858261996,0,0.23806443146374,0,0.248298857183432,0.112131862580613,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0.407016343054873,0,0,0,0,0.122241444182866,0,1.99727032255654,0.201273793591026,0 | |||
|short_description=p6@KCNMB4 | |||
}} |
Revision as of 14:38, 11 January 2014
Short description: | p6@KCNMB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KCNMB4_5end |
Coexpression cluster: | C1367_optic_extraskeletal_brain_rhabdomyosarcoma_substantia_corpus_thalamus |
Association with transcript: | 318bp_to_NM_014505, uc001svx.2_5end |
EntrezGene: | KCNMB4 |
HGNC: | 6289 |
UniProt: | Q86W47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.47e-18 | 8 |
neuron | 4.17e-18 | 6 |
neuroblast | 4.17e-18 | 6 |
electrically signaling cell | 4.17e-18 | 6 |