FFCP PHASE1:Hg19::chr12:132338046..132338047,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:132338046..132338047,+ | |||
|id=chr12:132338046..132338047,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002566;4.27e-34;1!CL:0000148;2.64e-30;10!CL:0000147;6.44e-22;14!CL:0000710;1.32e-15;20!CL:0002567;2.45e-12;3!CL:0000075;9.11e-12;27!CL:0002077;4.49e-09;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,3.61e-34,1;CL:0000148,3.39e-30,10;CL:0000541,3.39e-30,10;CL:0000147,7.70e-22,14;CL:0000710,1.50e-15,20;CL:0002567,3.24e-12,3;CL:0000075,9.99e-12,27;CL:0002077,1.82e-09,34;CL:0000333,1.25e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.61e-29!34;UBERON:0003528!1.61e-29!34;UBERON:0001893!3.36e-29!34;UBERON:0002791!1.35e-27!33;UBERON:0001869!3.94e-26!32;UBERON:0002780!1.37e-25!41;UBERON:0001890!1.37e-25!41;UBERON:0006240!1.37e-25!41;UBERON:0001049!1.99e-25!57;UBERON:0005068!1.99e-25!57;UBERON:0006241!1.99e-25!57;UBERON:0007135!1.99e-25!57;UBERON:0003080!7.86e-25!42;UBERON:0000955!2.54e-24!69;UBERON:0006238!2.54e-24!69;UBERON:0002616!2.67e-24!59;UBERON:0001017!2.78e-22!82;UBERON:0005743!7.86e-21!86;UBERON:0002619!5.83e-20!22;UBERON:0000956!1.60e-19!25;UBERON:0000203!1.60e-19!25;UBERON:0001950!1.98e-19!20;UBERON:0000073!3.00e-19!94;UBERON:0001016!3.00e-19!94;UBERON:0002346!4.65e-17!90;UBERON:0003075!7.39e-17!86;UBERON:0007284!7.39e-17!86;UBERON:0003056!1.01e-16!61;UBERON:0000033!7.34e-14!123;UBERON:0000153!1.03e-13!129;UBERON:0007811!1.03e-13!129;UBERON:0007023!1.19e-12!115;UBERON:0002420!2.81e-12!9;UBERON:0007245!2.81e-12!9;UBERON:0010009!2.81e-12!9;UBERON:0010011!2.81e-12!9;UBERON:0000454!2.81e-12!9;UBERON:0002308!9.53e-12!9;UBERON:0000125!9.53e-12!9;UBERON:0000924!6.10e-10!173;UBERON:0006601!6.10e-10!173;UBERON:0000200!9.24e-10!6;UBERON:0004121!1.24e-09!169;UBERON:0009663!3.32e-08!7;UBERON:0000349!7.50e-08!5;UBERON:0001871!1.89e-07!7;UBERON:0006331!3.09e-07!3;UBERON:0000988!5.34e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001876;8.34e-18;2!UBERON:0002702;8.34e-18;2!UBERON:0001870;2.45e-12;3!UBERON:0000349;6.33e-08;5!UBERON:0001950;2.77e-07;20!UBERON:0000200;8.25e-07;6!UBERON:0002619;9.95e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001876,5.48e-18,2;UBERON:0002702,6.48e-18,2;UBERON:0001870,2.07e-12,3;UBERON:0000349,5.35e-08,5;UBERON:0001950,2.44e-07,20;UBERON:0000200,7.58e-07,6;UBERON:0002619,8.87e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0.426730222566507,0.800791974072025,0.574752439954483,1.32208974556972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52394946301206,0.381988425558278,1.17217447210047,0,0.514137463516618,0,1.42913216315289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.281338832821026,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0.0882561266915003,0,0,0.397429223405979,0.253243183823515,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0.104602846312333,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0.415440338029185,0,0,0.242998226632099,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0,0.250381861413,0,0.110929051536852,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.192687675289379,0,0.638535436228605,0.205116364240755,0,0.276629009856872,0.322951291263702,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.253663240775627,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0.0679697329768317,0.394636641377094,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.475940431336403,0.872701380680755,0,0,0,0,0.126166424835079,0.546327859818478,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:132338046..132338047,+ | |||
}} |
Revision as of 16:45, 11 January 2014
Short description: | p@chr12:132338046..132338047, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:132338046..132338047, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 3.61e-34 | 1 |
melanocyte | 3.39e-30 | 10 |
melanoblast | 3.39e-30 | 10 |
pigment cell | 7.70e-22 | 14 |
neurecto-epithelial cell | 1.50e-15 | 20 |
light melanocyte | 3.24e-12 | 3 |
columnar/cuboidal epithelial cell | 9.99e-12 | 27 |
ecto-epithelial cell | 1.82e-09 | 34 |
migratory neural crest cell | 1.25e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
amygdala | 5.48e-18 | 2 |
middle frontal gyrus | 6.48e-18 | 2 |
frontal cortex | 2.07e-12 | 3 |
limbic system | 5.35e-08 | 5 |
neocortex | 2.44e-07 | 20 |
gyrus | 7.58e-07 | 6 |
regional part of cerebral cortex | 8.87e-07 | 22 |