FFCP PHASE1:Hg19::chr13:49077016..49077033,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C203 | |||
|description=CAGE_peak_at_chr13:49077016..49077033,- | |||
|id=chr13:49077016..49077033,- | |||
|ontology_enrichment_celltype=CL:0002032!5.61e-20!165;CL:0000837!5.61e-20!165;CL:0000037!6.90e-19!172;CL:0000566!6.90e-19!172;CL:0000763!4.92e-18!112;CL:0000049!4.92e-18!112;CL:0000988!1.78e-17!182;CL:0000738!4.56e-12!140;CL:0002031!2.03e-11!124;CL:0002057!4.41e-11!42;CL:0002087!8.04e-11!119;CL:0000860!3.36e-10!45;CL:0000839!1.09e-09!70;CL:0000557!1.63e-09!71;CL:0002194!1.71e-09!63;CL:0000576!1.71e-09!63;CL:0000040!1.71e-09!63;CL:0000559!1.71e-09!63;CL:0002009!4.00e-09!65;CL:0000766!1.05e-08!76;CL:0000134!1.28e-07!358;CL:0002320!2.47e-07!365;CL:0000219!5.46e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.84e-34;1!CL:0000911;1.84e-34;1!CL:0000814;1.84e-34;1!CL:0000084;1.09e-12;25!CL:0000235;9.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.84e-34,1;CL:0000914,1.84e-34,1;CL:0000911,1.84e-34,1;CL:0000814,1.84e-34,1;CL:0002042,1.84e-34,1;CL:0002039,1.84e-34,1;CL:0002040,1.84e-34,1;CL:0002041,1.84e-34,1;CL:0000893,5.48e-18,2;CL:0002489,5.48e-18,2;CL:0000809,5.48e-18,2;CL:0000808,5.48e-18,2;CL:0000894,5.48e-18,2;CL:0000806,5.48e-18,2;CL:0000807,5.48e-18,2;CL:0000805,5.48e-18,2;CL:0002425,5.48e-18,2;CL:0000084,1.09e-12,25;CL:0000827,1.09e-12,25;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0000037,2.00e-07,168;CL:0000988,4.60e-07,177;CL:0000235,9.49e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002425;5.48e-18;2 | |||
|ontology_enrichment_disease=DOID:2531!6.95e-15!51;DOID:0060083!6.95e-15!51;DOID:1240!8.21e-15!39;DOID:8692!2.53e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;2.64e-15;51!DOID:0060083;2.64e-15;51!DOID:1240;4.28e-15;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.30e-21,39;DOID:2531,1.16e-16,51;DOID:0060083,1.16e-16,51 | |||
|ontology_enrichment_uberon=UBERON:0002371!3.91e-08!80;UBERON:0002390!6.35e-08!102;UBERON:0003061!6.35e-08!102;UBERON:0001474!2.24e-07!86;UBERON:0002384!6.02e-07!375;UBERON:0002193!6.27e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.12e-09,4;UBERON:0005058,1.12e-09,4;UBERON:0009113,1.12e-09,4;UBERON:0003295,1.12e-09,4;UBERON:0005562,1.12e-09,4;UBERON:0003351,7.17e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581592955118259,0.377875943688809,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0.398927315243264,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0.552700035571697,0,0,0,0,0.566546713487831,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,59.2930411725759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0.199579371432817,1.7235483311913,52.2833749327991,0,0.280797178113459,0,0,0,0.169291777801603,0.1605880751037,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0,0,2.34031106982705,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.8334533143799,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.797189041880179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:49077016..49077033,- | |||
}} |
Revision as of 17:44, 11 January 2014
Short description: | p@chr13:49077016..49077033, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:49077016..49077033, - |
Coexpression cluster: | C203_acute_NK_chronic_CD133_lymphoma_immature_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.84e-34 | 1 |
immature NK T cell | 1.84e-34 | 1 |
effector T cell | 1.84e-34 | 1 |
mature NK T cell | 1.84e-34 | 1 |
immature NK T cell stage IV | 1.84e-34 | 1 |
immature NK T cell stage I | 1.84e-34 | 1 |
immature NK T cell stage II | 1.84e-34 | 1 |
immature NK T cell stage III | 1.84e-34 | 1 |
thymocyte | 5.48e-18 | 2 |
double negative thymocyte | 5.48e-18 | 2 |
double-positive, alpha-beta thymocyte | 5.48e-18 | 2 |
DN4 thymocyte | 5.48e-18 | 2 |
DN1 thymic pro-T cell | 5.48e-18 | 2 |
DN2 thymocyte | 5.48e-18 | 2 |
DN3 thymocyte | 5.48e-18 | 2 |
immature single positive thymocyte | 5.48e-18 | 2 |
early T lineage precursor | 5.48e-18 | 2 |
T cell | 1.09e-12 | 25 |
pro-T cell | 1.09e-12 | 25 |
hematopoietic oligopotent progenitor cell | 9.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.83e-08 | 161 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic cell | 4.60e-07 | 177 |
macrophage | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.12e-09 | 4 |
hemolymphoid system gland | 1.12e-09 | 4 |
thymic region | 1.12e-09 | 4 |
pharyngeal gland | 1.12e-09 | 4 |
thymus primordium | 1.12e-09 | 4 |
pharyngeal epithelium | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.30e-21 | 39 |
hematologic cancer | 1.16e-16 | 51 |
immune system cancer | 1.16e-16 | 51 |