FFCP PHASE1:Hg19::chr13:100084351..100084362,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr13:100084351..100084362,- | |||
|id=chr13:100084351..100084362,- | |||
|ontology_enrichment_celltype=CL:0002057!3.37e-85!42;CL:0000860!3.91e-79!45;CL:0002009!2.64e-56!65;CL:0002194!6.43e-54!63;CL:0000576!6.43e-54!63;CL:0000040!6.43e-54!63;CL:0000559!6.43e-54!63;CL:0000557!4.09e-51!71;CL:0000839!5.00e-48!70;CL:0002087!3.09e-46!119;CL:0002031!3.34e-44!124;CL:0000766!7.90e-44!76;CL:0000738!6.54e-41!140;CL:0000037!4.39e-32!172;CL:0000566!4.39e-32!172;CL:0002032!1.28e-31!165;CL:0000837!1.28e-31!165;CL:0000763!2.18e-30!112;CL:0000049!2.18e-30!112;CL:0000988!5.88e-30!182;CL:0000134!7.66e-12!358;CL:0002320!1.77e-11!365;CL:0000219!3.36e-10!390;CL:0000034!5.45e-09!444;CL:0000048!1.15e-08!430;CL:0000723!1.90e-08!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.90e-55;33!CL:0002057;3.90e-55;33!CL:0000473;1.60e-37;39!CL:0000234;1.60e-37;39!CL:0000576;8.45e-27;48!CL:0000766;9.54e-15;69!CL:0002087;2.93e-11;104!CL:0000763;6.45e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.26e-48,42;CL:0002057,3.26e-48,42;CL:0000473,5.12e-42,48;CL:0000234,5.12e-42,48;CL:0002194,2.46e-33,59;CL:0000576,2.46e-33,59;CL:0000040,2.46e-33,59;CL:0000559,2.46e-33,59;CL:0002009,3.26e-32,61;CL:0000839,1.06e-29,66;CL:0000557,3.04e-29,67;CL:0000766,3.85e-27,72;CL:0002087,2.28e-19,115;CL:0002031,1.68e-18,120;CL:0000763,1.13e-17,108;CL:0000049,1.13e-17,108;CL:0000738,3.81e-16,136;CL:0002032,2.17e-13,161;CL:0000837,2.17e-13,161;CL:0000037,9.18e-13,168;CL:0000988,4.98e-12,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.86e-32;42 | |||
|ontology_enrichment_disease=DOID:2355!5.90e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:2355;3.28e-14;1!DOID:74;9.55e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,3.50e-14,1;DOID:74,9.87e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!9.05e-45!80;UBERON:0002390!1.82e-42!102;UBERON:0003061!1.82e-42!102;UBERON:0001474!2.87e-41!86;UBERON:0002193!3.84e-38!112;UBERON:0004765!2.58e-34!101;UBERON:0001434!2.58e-34!101;UBERON:0002405!5.95e-32!115;UBERON:0002204!1.84e-18!167;UBERON:0003081!9.08e-17!216;UBERON:0002384!5.52e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.18e-25,76;UBERON:0002405,3.09e-24,93;UBERON:0001474,1.08e-23,82;UBERON:0002390,6.23e-23,98;UBERON:0003061,6.23e-23,98;UBERON:0004765,1.78e-21,90;UBERON:0002193,1.11e-20,108;UBERON:0001434,3.38e-19,100;UBERON:0002204,6.79e-11,167;UBERON:0003081,2.99e-10,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.464858073811369,0.411167888021826,1.54853185447552,1.43846196161075,0.512321413058201,0.709446689665756,1.72372840368309,0,0,0.376484679085209,0.545812300115692,0.224723484445085,1.22433556948361,2.56743221660875,3.19668562899521,0,0.398927315243264,0.426224750532694,1.7412554317715,0,2.4912889959823,0.251248665256743,2.08593167368081,1.3031330682307,1.81619850790011,2.20966581592539,4.43047342417238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14899327122344,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09876427442351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:100084351..100084362,- | |||
}} |
Revision as of 18:27, 11 January 2014
Short description: | p@chr13:100084351..100084362, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:100084351..100084362, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.26e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.26e-48 | 42 |
defensive cell | 5.12e-42 | 48 |
phagocyte | 5.12e-42 | 48 |
monopoietic cell | 2.46e-33 | 59 |
monocyte | 2.46e-33 | 59 |
monoblast | 2.46e-33 | 59 |
promonocyte | 2.46e-33 | 59 |
macrophage dendritic cell progenitor | 3.26e-32 | 61 |
myeloid lineage restricted progenitor cell | 1.06e-29 | 66 |
granulocyte monocyte progenitor cell | 3.04e-29 | 67 |
myeloid leukocyte | 3.85e-27 | 72 |
nongranular leukocyte | 2.28e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 1.68e-18 | 120 |
myeloid cell | 1.13e-17 | 108 |
common myeloid progenitor | 1.13e-17 | 108 |
leukocyte | 3.81e-16 | 136 |
hematopoietic oligopotent progenitor cell | 2.17e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.17e-13 | 161 |
hematopoietic stem cell | 9.18e-13 | 168 |
hematopoietic cell | 4.98e-12 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.18e-25 | 76 |
immune system | 3.09e-24 | 93 |
bone element | 1.08e-23 | 82 |
hematopoietic system | 6.23e-23 | 98 |
blood island | 6.23e-23 | 98 |
skeletal element | 1.78e-21 | 90 |
hemolymphoid system | 1.11e-20 | 108 |
skeletal system | 3.38e-19 | 100 |
musculoskeletal system | 6.79e-11 | 167 |
lateral plate mesoderm | 2.99e-10 | 203 |
Ontology term | p-value | n |
---|---|---|
anemia | 3.50e-14 | 1 |
hematopoietic system disease | 9.87e-08 | 2 |