FFCP PHASE1:Hg19::chr13:109328178..109328195,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_at_chr13:109328178..109328195,+ | |||
|id=chr13:109328178..109328195,+ | |||
|ontology_enrichment_celltype=CL:0002274!7.82e-39!5;CL:0000457!7.82e-39!5;CL:0002191!7.82e-39!5;CL:0000097!7.82e-39!5;CL:0000831!7.82e-39!5;CL:0002028!7.82e-39!5;CL:0000163!1.53e-21!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.65e-140;5!CL:0000163;1.98e-78;9!CL:0000151;2.45e-18;36!CL:0000766;6.90e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.65e-140,5;CL:0002028,1.65e-140,5;CL:0000163,1.98e-78,9;CL:0000151,4.78e-20,36;CL:0002031,1.14e-11,120;CL:0000839,5.98e-11,66;CL:0000557,8.57e-11,67;CL:0000738,2.51e-10,136;CL:0000766,4.48e-10,72;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177;CL:0000763,7.91e-07,108;CL:0000049,7.91e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!1.53e-10!3;UBERON:0004854!1.53e-10!3;UBERON:0009034!1.53e-10!3;UBERON:0002095!1.53e-10!3;UBERON:0004782!1.53e-10!3;UBERON:0003281!1.53e-10!3;UBERON:0009664!1.53e-10!3;UBERON:0002296!1.53e-10!3;UBERON:0005602!1.53e-10!3;UBERON:0001179!1.53e-10!3;UBERON:0006293!1.53e-10!3;UBERON:0001871!7.27e-09!7;UBERON:0001301!7.75e-09!1;UBERON:0006834!1.05e-08!1;UBERON:0007190!1.91e-08!1;UBERON:0001882!2.22e-08!1;UBERON:0005403!2.22e-08!1;UBERON:0001869!1.71e-07!32;UBERON:0001893!4.89e-07!34;UBERON:0007023!5.84e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.44e-09,76;UBERON:0001474,6.78e-09,82;UBERON:0004765,3.90e-08,90;UBERON:0002405,6.96e-08,93;UBERON:0002390,1.70e-07,98;UBERON:0003061,1.70e-07,98;UBERON:0001434,2.36e-07,100;UBERON:0002193,7.91e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75750833220288,1.23150884174919,0.944529375764151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.6331618947972,42.3512967603617,10.3664057770386,17.2943944100354,14.1391525437546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953619473882272,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr13:109328178..109328195,+ | |||
}} |
Revision as of 18:37, 11 January 2014
Short description: | p@chr13:109328178..109328195, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:109328178..109328195, + |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.65e-140 | 5 |
basophil mast progenitor cell | 1.65e-140 | 5 |
endocrine cell | 1.98e-78 | 9 |
secretory cell | 4.78e-20 | 36 |
hematopoietic lineage restricted progenitor cell | 1.14e-11 | 120 |
myeloid lineage restricted progenitor cell | 5.98e-11 | 66 |
granulocyte monocyte progenitor cell | 8.57e-11 | 67 |
leukocyte | 2.51e-10 | 136 |
myeloid leukocyte | 4.48e-10 | 72 |
hematopoietic oligopotent progenitor cell | 9.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.40e-09 | 161 |
hematopoietic stem cell | 2.15e-08 | 168 |
hematopoietic cell | 5.65e-08 | 177 |
myeloid cell | 7.91e-07 | 108 |
common myeloid progenitor | 7.91e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.44e-09 | 76 |
bone element | 6.78e-09 | 82 |
skeletal element | 3.90e-08 | 90 |
immune system | 6.96e-08 | 93 |
hematopoietic system | 1.70e-07 | 98 |
blood island | 1.70e-07 | 98 |
skeletal system | 2.36e-07 | 100 |
hemolymphoid system | 7.91e-07 | 108 |