FFCP PHASE1:Hg19::chr15:22545599..22545612,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-476bp_to_ENST00000553429_5end | |||
|description=CAGE_peak_2_at_ENST00000553429_5end | |||
|id=chr15:22545599..22545612,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.38e-16!42;CL:0000860!3.64e-15!45;CL:0000557!6.05e-12!71;CL:0000839!2.10e-11!70;CL:0000766!1.51e-10!76;CL:0002009!3.36e-10!65;CL:0002194!5.73e-10!63;CL:0000576!5.73e-10!63;CL:0000040!5.73e-10!63;CL:0000559!5.73e-10!63 | |||
|ontology_enrichment_celltype_v019=CL:0000228;1.05e-08;1!CL:0002372;1.05e-08;1!CL:0000860;2.80e-07;33!CL:0002057;2.80e-07;33!CL:0000333;3.54e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,9.02e-09,1;CL:0002372,9.02e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.05e-08;1!DOID:3165;1.05e-08;1!DOID:0060121;1.05e-08;1!DOID:2438;1.05e-08;1!DOID:4418;1.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,6.65e-09,1;DOID:3165,6.65e-09,1;DOID:0060121,6.65e-09,1;DOID:2438,6.65e-09,1;DOID:4418,6.65e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.97e-10!80;UBERON:0001474!1.35e-09!86;UBERON:0004765!3.01e-07!101;UBERON:0001434!3.01e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002420;6.52e-08;9!UBERON:0000125;6.52e-08;9!UBERON:0007245;6.52e-08;9!UBERON:0002308;6.52e-08;9!UBERON:0010009;6.52e-08;9!UBERON:0010011;6.52e-08;9!UBERON:0000454;6.52e-08;9!UBERON:0000013;3.54e-07;5!UBERON:0002410;3.54e-07;5!UBERON:0003528;5.17e-07;34!UBERON:0002020;5.17e-07;34!UBERON:0000349;8.40e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.73e-10,53;UBERON:0002616,9.73e-10,53;UBERON:0001049,3.74e-09,56;UBERON:0005068,3.74e-09,56;UBERON:0006241,3.74e-09,56;UBERON:0007135,3.74e-09,56;UBERON:0002420,4.90e-08,9;UBERON:0007245,4.90e-08,9;UBERON:0010009,4.90e-08,9;UBERON:0010011,4.90e-08,9;UBERON:0000454,4.90e-08,9;UBERON:0001016,6.38e-08,89;UBERON:0002780,6.50e-08,41;UBERON:0001890,6.50e-08,41;UBERON:0003080,6.50e-08,41;UBERON:0006240,6.50e-08,41;UBERON:0000125,7.91e-08,9;UBERON:0002308,7.91e-08,9;UBERON:0000955,3.34e-07,68;UBERON:0006238,3.34e-07,68;UBERON:0000013,3.55e-07,5;UBERON:0002410,3.55e-07,5;UBERON:0003528,3.75e-07,34;UBERON:0002020,3.75e-07,34;UBERON:0000349,5.09e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0.919421224478927,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0.436194716338694,0.755751887377619,0.970336244751265,0,0,1.23882548358041,2.3015391385772,0.768482119587302,0.709446689665756,1.37898272294647,3.22742341791913,0,0.188242339542605,0.818718450173537,0,0.612167784741805,0.320929027076094,0.639337125799041,0,0.398927315243264,1.27867425159808,0.290209238628584,0,0,1.25624332628372,0.521482918420201,0.868755378820466,0,0.736555271975129,0,0.211255286311942,0.212604299965044,0,0.112328631146495,0.300353785683013,0.16072558669708,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0.668745981562712,0,0.473447805734733,0,0.222820913770347,0.294605907474837,0.221533894583621,0.541607727530031,0,0.260118695119756,0,0.276350017785848,0,0.444859689486181,0,1.04535523804977,0,0,0.34362744548263,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0.435758888184812,0,0,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,1.24396869324463,0.288239906833923,0.25248486685276,0.190493682876507,0,0,0,0,0.300343057843917,0.571652865261156,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6557641036396,0,0,0,0,0,0,0,0,0,1.36940807419915,0.156679895773023,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09224469574562,0,0,0.23874448473769,0,0,1.9882952955326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,1.77148277162768,0,1.52581736317083,0,0.886642856860642,0,0,0,0,0.341826167541004,0.23056390438806,0,0.325942115766024,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0.728341138602278,0,0,0.30607276163049,0.063186579628488,0,0,0.664653872707185,0,0,0,0,0,0,0.685946781900644,0,0,0,0,0,0.0821154570532092,0,0,0,0.137041924646751,1.58971689362392,0,0,0,0,0.19980960958213,0.144090417154106,0.458146384663663,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,1.59045937961861,0,0.321506296930038,0.137539436597234,0.415440338029185,0.2249738915515,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0.76280561296425,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,1.0342636508924,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0.886068179966986,0.976210119215705,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0.686791410365586,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0.279759015438889,0,4.09261988171685,0.107824811396682,0,3.60391806033646,0,0.212574920101683,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0.115525666150338,0.381382095467167,0,0.397832444232549,0,0,0,0,0,0,0,1.56215619722769,0.206686796501184,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,1.21393120847326,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0.813689977576877,0,0,0,0,0,0,0.354996002191696,0.170426809518315,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0.233939463462106,0,1.54596118010839,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.509944148709909,0.26721740526556,0.735159196278759,0.250707539292375,0.151557396436479,1.33982065078089,1.65833887891756,0.20686599172379,0,0.23806443146374,0,0,0.560659312903067,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0.665756774185513,0,0 | |||
|short_description=p2@ENST00000553429 | |||
}} |
Revision as of 22:25, 11 January 2014
Short description: | p2@ENST00000553429 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000553429_5end |
Coexpression cluster: | NA |
Association with transcript: | -476bp_to_ENST00000553429_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 9.02e-09 | 1 |
myotube | 9.02e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 9.73e-10 | 53 |
regional part of brain | 9.73e-10 | 53 |
neural tube | 3.74e-09 | 56 |
neural rod | 3.74e-09 | 56 |
future spinal cord | 3.74e-09 | 56 |
neural keel | 3.74e-09 | 56 |
basal ganglion | 4.90e-08 | 9 |
nuclear complex of neuraxis | 4.90e-08 | 9 |
aggregate regional part of brain | 4.90e-08 | 9 |
collection of basal ganglia | 4.90e-08 | 9 |
cerebral subcortex | 4.90e-08 | 9 |
nervous system | 6.38e-08 | 89 |
regional part of forebrain | 6.50e-08 | 41 |
forebrain | 6.50e-08 | 41 |
anterior neural tube | 6.50e-08 | 41 |
future forebrain | 6.50e-08 | 41 |
neural nucleus | 7.91e-08 | 9 |
nucleus of brain | 7.91e-08 | 9 |
brain | 3.34e-07 | 68 |
future brain | 3.34e-07 | 68 |
sympathetic nervous system | 3.55e-07 | 5 |
autonomic nervous system | 3.55e-07 | 5 |
brain grey matter | 3.75e-07 | 34 |
gray matter | 3.75e-07 | 34 |
limbic system | 5.09e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 6.65e-09 | 1 |
skin benign neoplasm | 6.65e-09 | 1 |
integumentary system benign neoplasm | 6.65e-09 | 1 |
dermis tumor | 6.65e-09 | 1 |
cutaneous fibrous histiocytoma | 6.65e-09 | 1 |