FFCP PHASE1:Hg19::chr16:68867668..68867683,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2385 | |||
|description=CAGE_peak_at_chr16:68867668..68867683,+ | |||
|id=chr16:68867668..68867683,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.08e-17!254;CL:0002076!4.22e-16!43;CL:0000039!2.17e-14!7;CL:0000586!2.17e-14!7;CL:0000223!4.77e-14!59;CL:0002251!6.88e-09!21 | |||
|ontology_enrichment_celltype_v019=CL:0000039;6.84e-11;7!CL:0000586;6.84e-11;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.76e-11,7;CL:0000586,9.76e-11,7;CL:0000066,4.41e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.05e-27!106;DOID:1749!4.83e-22!14;DOID:0050687!4.71e-21!143;DOID:162!1.47e-11!235;DOID:14566!4.99e-11!239;DOID:299!2.37e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.02e-14;14!DOID:1799;1.21e-09;1!DOID:10165;1.21e-09;1!DOID:1798;1.21e-09;1!DOID:0050619;1.62e-09;1!DOID:3111;1.62e-09;1!DOID:1357;1.62e-09;1!DOID:3603;1.62e-09;1!DOID:299;7.00e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.92e-19,106;DOID:0050687,6.31e-17,143;DOID:1749,2.30e-14,14;DOID:162,8.32e-13,235;DOID:14566,1.84e-12,239;DOID:1799,1.21e-09,1;DOID:10165,1.21e-09,1;DOID:1798,1.21e-09,1;DOID:0050619,1.69e-09,1;DOID:1357,1.69e-09,1;DOID:3111,1.84e-09,1;DOID:3603,1.84e-09,1;DOID:299,7.32e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.18e-17!169;UBERON:0000925!5.18e-17!169;UBERON:0006595!5.18e-17!169;UBERON:0001007!7.16e-15!155;UBERON:0001555!7.16e-15!155;UBERON:0007026!7.16e-15!155;UBERON:0004921!2.51e-12!129;UBERON:0004185!2.51e-12!129;UBERON:0005911!4.90e-10!82;UBERON:0005409!3.65e-09!35;UBERON:0000344!4.39e-09!12;UBERON:0005156!5.74e-09!59;UBERON:0000990!5.74e-09!59;UBERON:0000077!4.12e-08!130;UBERON:0000160!4.59e-08!27;UBERON:0005153!7.25e-08!37;UBERON:0002294!2.29e-07!7;UBERON:0001173!2.29e-07!7;UBERON:0004912!2.29e-07!7;UBERON:0003343!2.59e-07!4;UBERON:0004785!2.59e-07!4;UBERON:0003929!4.60e-07!54;UBERON:0000161!5.33e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;1.21e-09;1!UBERON:0005056;1.21e-09;1!UBERON:0004176;1.21e-09;1!UBERON:0001764;1.62e-09;1!UBERON:0001825;1.62e-09;1!UBERON:0004913;3.39e-09;1!UBERON:0003703;3.39e-09;1!UBERON:0001174;3.39e-09;1!UBERON:0004914;3.39e-09;1!UBERON:0002394;5.97e-09;4!UBERON:0003928;5.97e-09;4!UBERON:0001052;8.54e-09;4!UBERON:0004907;3.34e-07;5!UBERON:0000160;3.59e-07;17!UBERON:0000059;5.74e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,1.32e-09,1;UBERON:0005056,1.32e-09,1;UBERON:0001764,1.69e-09,1;UBERON:0001825,1.69e-09,1;UBERON:0004913,5.28e-09,1;UBERON:0003703,5.28e-09,1;UBERON:0001174,5.28e-09,1;UBERON:0004914,5.28e-09,1;UBERON:0001052,7.58e-09,4;UBERON:0004907,3.04e-07,5;UBERON:0000160,3.84e-07,17;UBERON:0000059,5.57e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0.243947412259191,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0,0,0.368965315629341,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.768760269460425,0.255225424989168,1.31505115112215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0,0,0,0.71623345421307,0,0.307160702099232,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0.269605053441981,2.68531762013414,0,0,0,0,0,0,0,11.198393726665,0,0,0.796554137998498,0.762760950878299,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0,5.53353370531344,0.538545866458633,1.08647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.794682894901893,0,0.163232808159148,1.13082457147153,0,0.995261931078505,0.353830258013357,1.22206028986725,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,1.99226682220855,0,0.694238953340524,3.03776431984571,0.261177619741208,0,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0.64127056201227,0,0,0.576361668616424,0,0,0,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,1.71086837884329,0,0.106787412567695,0.157204305099666,0.828478110694391,0,0,0,8.93677760878255,0,0,0,0,2.35581144375351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85994864474866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,2.11312123358627,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0.366857197043358,0.115525666150338,0,0,0,0,0,0,3.14288033377707,0,1.03499260351932,0,0,0,0,0,0,0,0,1.66091155931474,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.333694205676207,0.156986185701028,0,1.96190514319652,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0.68732060563215,0,0,0.559277158988962,0.098150233615243,0.365753774946808,0,0,0,0,0.233939463462106,0,0,0,0,0,0.771741581079447,0.218559560503957,0,0,0.471353094203252,0,0,0,0,0,0,0,5.53517209677539,1.05868461514708,1.28386186702669,0.730336388246517,0.917458566809082,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.407955318967927,0.801652215796681,0.36757959813938,1.0028301571695,0,0,0,0,0,0,0,0,0,0.12729431655633,0.606351566874658,0,0,0,0.143444410785353,0,0.325613074443898,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:68867668..68867683,+ | |||
}} |
Revision as of 12:02, 20 January 2014
Short description: | p@chr16:68867668..68867683, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr16:68867668..68867683, + |
Coexpression cluster: | C2385_breast_choriocarcinoma_squamous_pancreatic_malignant_mesothelioma_bronchioalveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.76e-11 | 7 |
germ cell | 9.76e-11 | 7 |
epithelial cell | 4.41e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 1.32e-09 | 1 |
external female genitalia | 1.32e-09 | 1 |
maxillary sinus | 1.69e-09 | 1 |
paranasal sinus | 1.69e-09 | 1 |
hepatopancreatic ampulla | 5.28e-09 | 1 |
extrahepatic bile duct | 5.28e-09 | 1 |
common bile duct | 5.28e-09 | 1 |
duodenal papilla | 5.28e-09 | 1 |
rectum | 7.58e-09 | 4 |
lower digestive tract | 3.04e-07 | 5 |
intestine | 3.84e-07 | 17 |
large intestine | 5.57e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.92e-19 | 106 |
cell type cancer | 6.31e-17 | 143 |
squamous cell carcinoma | 2.30e-14 | 14 |
cancer | 8.32e-13 | 235 |
disease of cellular proliferation | 1.84e-12 | 239 |
islet cell tumor | 1.21e-09 | 1 |
endocrine pancreas cancer | 1.21e-09 | 1 |
pancreatic endocrine carcinoma | 1.21e-09 | 1 |
paranasal sinus cancer | 1.69e-09 | 1 |
maxillary sinus cancer | 1.69e-09 | 1 |
cystadenocarcinoma | 1.84e-09 | 1 |
mucinous cystadenocarcinoma | 1.84e-09 | 1 |
adenocarcinoma | 7.32e-08 | 25 |