FFCP PHASE1:Hg19::chr17:73718353..73718380,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:73718353..73718380,+ | |||
|id=chr17:73718353..73718380,+ | |||
|ontology_enrichment_celltype=CL:0002076!7.92e-20!43;CL:0000223!4.32e-15!59;CL:0002251!3.20e-13!21;CL:0000066!2.20e-12!254;CL:0002368!2.78e-08!13;CL:0000622!2.94e-08!5;CL:0000076!5.31e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000622;2.42e-29;5!CL:0000154;1.96e-24;6!CL:0002623;7.63e-19;3!CL:0000150;3.12e-16;9!CL:0000317;2.71e-12;2!CL:1000448;2.71e-12;2!CL:0002308;2.71e-12;2!CL:0002140;2.71e-12;2!CL:0002251;4.10e-10;20!CL:0002076;8.55e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,9.01e-30,5;CL:0000154,8.68e-25,6;CL:0002623,8.65e-19,3;CL:0000150,1.82e-16,9;CL:0000317,9.00e-13,2;CL:1000448,9.00e-13,2;CL:0002308,9.00e-13,2;CL:0002140,9.00e-13,2;CL:0002251,4.21e-10,20;CL:0002076,1.20e-09,42;CL:0000223,3.46e-08,58;CL:0000066,3.35e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!5.52e-11!14;DOID:305!4.10e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:4929;2.71e-12;2!DOID:1749;6.36e-10;14!DOID:299;8.33e-08;25!DOID:3151;1.45e-07;1!DOID:3149;1.45e-07;1!DOID:3112;5.60e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,2.04e-12,2;DOID:1749,5.20e-10,14;DOID:299,7.89e-08,25;DOID:3151,1.46e-07,1;DOID:3149,1.46e-07,1;DOID:3112,8.67e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.25e-20!115;UBERON:0004119!5.68e-18!169;UBERON:0000925!5.68e-18!169;UBERON:0006595!5.68e-18!169;UBERON:0001007!1.14e-14!155;UBERON:0001555!1.14e-14!155;UBERON:0007026!1.14e-14!155;UBERON:0004121!4.57e-13!169;UBERON:0000924!2.36e-12!173;UBERON:0006601!2.36e-12!173;UBERON:0000077!2.58e-11!130;UBERON:0004921!3.08e-11!129;UBERON:0004185!3.08e-11!129;UBERON:0000062!3.47e-11!511;UBERON:0000161!4.56e-11!35;UBERON:0000166!6.54e-11!21;UBERON:0000033!9.81e-11!123;UBERON:0001004!1.12e-10!72;UBERON:0000153!2.96e-10!129;UBERON:0007811!2.96e-10!129;UBERON:0001041!6.28e-10!98;UBERON:0003075!1.08e-09!86;UBERON:0007284!1.08e-09!86;UBERON:0000481!1.15e-09!347;UBERON:0000064!1.15e-09!219;UBERON:0002075!1.21e-09!18;UBERON:0002346!8.15e-09!90;UBERON:0001049!1.26e-08!57;UBERON:0005068!1.26e-08!57;UBERON:0006241!1.26e-08!57;UBERON:0007135!1.26e-08!57;UBERON:0000165!3.31e-08!28;UBERON:0000930!3.31e-08!28;UBERON:0005157!4.70e-08!51;UBERON:0002050!6.62e-08!605;UBERON:0005423!6.62e-08!605;UBERON:0000467!8.13e-08!625;UBERON:0000475!8.90e-08!365;UBERON:0000922!9.00e-08!612;UBERON:0000480!9.60e-08!626;UBERON:0000464!9.99e-08!104;UBERON:0000923!1.46e-07!604;UBERON:0005291!1.46e-07!604;UBERON:0006598!1.46e-07!604;UBERON:0002532!1.46e-07!604;UBERON:0000468!1.47e-07!659;UBERON:0004111!1.60e-07!241;UBERON:0001045!5.58e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.71e-12;2!UBERON:0007771;2.71e-12;2!UBERON:0003297;2.71e-12;2!UBERON:0001821;2.71e-12;2!UBERON:0003487;2.71e-12;2!UBERON:0001820;2.71e-12;2!UBERON:0001044;1.14e-09;6!UBERON:0003293;1.14e-09;6!UBERON:0003294;1.14e-09;6!UBERON:0010047;1.14e-09;6!UBERON:0003408;1.14e-09;6!UBERON:0000167;1.14e-09;6!UBERON:0001264;2.07e-09;10!UBERON:0002075;8.73e-08;18!UBERON:0000161;1.47e-07;19!UBERON:0000166;1.47e-07;19!UBERON:0000996;2.29e-07;1!UBERON:0000997;5.60e-07;1!UBERON:0004913;5.60e-07;1!UBERON:0005056;5.60e-07;1!UBERON:0003703;5.60e-07;1!UBERON:0004176;5.60e-07;1!UBERON:0001174;5.60e-07;1!UBERON:0004914;5.60e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,9.00e-13,2;UBERON:0007771,9.00e-13,2;UBERON:0003297,9.00e-13,2;UBERON:0001821,9.00e-13,2;UBERON:0003487,9.00e-13,2;UBERON:0001820,9.00e-13,2;UBERON:0005089,9.00e-13,2;UBERON:0005088,9.00e-13,2;UBERON:0001044,1.22e-09,6;UBERON:0003293,1.22e-09,6;UBERON:0003294,1.22e-09,6;UBERON:0010047,1.22e-09,6;UBERON:0000167,1.22e-09,6;UBERON:0001264,1.54e-09,10;UBERON:0002075,8.25e-08,18;UBERON:0004119,1.03e-07,160;UBERON:0000925,1.03e-07,160;UBERON:0006595,1.03e-07,160;UBERON:0000996,2.37e-07,1;UBERON:0000161,4.54e-07,36;UBERON:0000997,4.57e-07,1;UBERON:0005056,4.57e-07,1;UBERON:0004913,7.73e-07,1;UBERON:0003703,7.73e-07,1;UBERON:0001174,7.73e-07,1;UBERON:0004914,7.73e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0,0,0,0,0,0,0,0,0,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,1.13061588384802,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,1.36373060295417,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98775256867763,0,0.100528972411631,0.462942225792648,0,0,0,0.34779121492523,0,0.144366447761074,0,0,1.58040879591855,0,0,0,0,0,0.503946384596579,0.708875486211932,0.358234090811393,0.290633938513962,0.766765358330422,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0.828728900423067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,1.72279661398852,1.95018073810956,0,0,0,0,0,0,0,0,0,0.826424576804891,1.72971060628596,0.382838137483752,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,1.08890984861323,0.188287601553558,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,1.19372242368845,0,1.22864280839693,0,0.281338832821026,0,0,0,0.597743964753209,0.552567831062295,0,0,0,0,0.269605053441981,0.358042349351218,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,1.365521379426,0.508507300585533,0,0,0,0,0,0.361789315876224,0,0.442317039724898,0,0.438770794307945,0,4.46155981691531,0.769502585037971,0,0,0.0897576444097721,0,1.27600463892768,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.265372693510018,0,0,0,0,0.337005664903385,0,0.234264445725339,0,0.586993856796269,0,0,0,0,0.31593289814244,0,0,0.664653872707185,1.65495977937749,1.2557316736289,3.58417289318877,0,0,0,1.46988596121566,0.261177619741208,0,0,0,0.0730893170861856,0.164230914106418,0.775912131907355,0,0.225980740780532,0,0,0.253243183823515,0.391102765469606,0,0.85381197895741,0.39961921916426,0.432271251462318,0,0,0,0.372757606696298,0.235694034616795,0,0,0,0,0,0.273810757783986,0,0,0.262887354279314,0.837847203816763,0.687481272035051,0.717873024576814,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0,5.03152031398899,0,0.157363764404994,0,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0.171086837884329,2.81926008926669,0.106787412567695,0.314408610199332,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0.500763722825999,0.573409195690071,0,0.310482014706917,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0.71635536432595,0,0.657852148736121,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.207471757392654,0.484426936895553,0,0.88332946650923,0.235939446695481,1.46742878817343,0.577628330751691,0,0,0,0.225630985047772,0,0,0.261906694481422,1.14640342257068,1.18284868973636,0.135075169236789,0.781078098613847,0,0.0634158101939068,0,0.548257766857182,0.496211178389294,0,2.04419884223352,0,0.672567444437648,0,0,0.354809480650555,0,0,0,0.131545547125698,0,0,0.78493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,2.69381013411948,2.56077715640925,4.14755797088455,0,0,0,0,0.4582137370881,0.31020638566432,0,0,0.392600934460972,4.99863492427305,0,0,0,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0.392616934229891,0,0.4226557275834,0,1.12780701575824,0.966868319603658,0,1.78553938605658,0.352894871715692,0.0802413666891683,0,0.458729283404541,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0.101988829741982,0,0.18378979906969,0,0.151557396436479,0,0.829169439458779,0.310298987585686,0.426467963801962,0,0,0,0.112131862580613,0.0636471582781649,0,0.217716747896961,0.342233301085281,0.404112318087525,1.29099969706817,0,0.325613074443898,0.320182037633146,0,1.79650404213174,0,0,0.406896178315738,2.66302709674205,0,0 | |||
|short_description=p@chr17:73718353..73718380,+ | |||
}} |
Revision as of 17:21, 20 January 2014
Short description: | p@chr17:73718353..73718380, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:73718353..73718380, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 9.01e-30 | 5 |
protein secreting cell | 8.68e-25 | 6 |
acinar cell of salivary gland | 8.65e-19 | 3 |
glandular epithelial cell | 1.82e-16 | 9 |
sebum secreting cell | 9.00e-13 | 2 |
epithelial cell of sweat gland | 9.00e-13 | 2 |
epithelial cell of skin gland | 9.00e-13 | 2 |
acinar cell of sebaceous gland | 9.00e-13 | 2 |
epithelial cell of alimentary canal | 4.21e-10 | 20 |
endo-epithelial cell | 1.20e-09 | 42 |
endodermal cell | 3.46e-08 | 58 |
epithelial cell | 3.35e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
skin gland | 9.00e-13 | 2 |
epidermis gland | 9.00e-13 | 2 |
gland of integumental system | 9.00e-13 | 2 |
sebaceous gland | 9.00e-13 | 2 |
skin sebaceous gland | 9.00e-13 | 2 |
sweat gland | 9.00e-13 | 2 |
sweat gland placode | 9.00e-13 | 2 |
sebaceous gland placode | 9.00e-13 | 2 |
saliva-secreting gland | 1.22e-09 | 6 |
gland of oral region | 1.22e-09 | 6 |
gland of foregut | 1.22e-09 | 6 |
oral gland | 1.22e-09 | 6 |
oral cavity | 1.22e-09 | 6 |
pancreas | 1.54e-09 | 10 |
viscus | 8.25e-08 | 18 |
endoderm-derived structure | 1.03e-07 | 160 |
endoderm | 1.03e-07 | 160 |
presumptive endoderm | 1.03e-07 | 160 |
vagina | 2.37e-07 | 1 |
orifice | 4.54e-07 | 36 |
mammalian vulva | 4.57e-07 | 1 |
external female genitalia | 4.57e-07 | 1 |
hepatopancreatic ampulla | 7.73e-07 | 1 |
extrahepatic bile duct | 7.73e-07 | 1 |
common bile duct | 7.73e-07 | 1 |
duodenal papilla | 7.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 2.04e-12 | 2 |
squamous cell carcinoma | 5.20e-10 | 14 |
adenocarcinoma | 7.89e-08 | 25 |
skin squamous cell carcinoma | 1.46e-07 | 1 |
keratoacanthoma | 1.46e-07 | 1 |
papillary adenocarcinoma | 8.67e-07 | 1 |