FFCP PHASE1:Hg19::chr18:56296157..56296169,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115701 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |||
|TSSclassifier=strong | |||
|UniProt=Q86TB3 | |||
|association_with_transcript=19bp_to_ENST00000361673,NM_052947,uc002lhj.3_5end | |||
|coexpression_cluster_id=C1057 | |||
|description=CAGE_peak_22_at_ALPK2_5end | |||
|id=chr18:56296157..56296169,- | |||
|ontology_enrichment_celltype=CL:0002195!8.20e-08!2;CL:0002571!8.20e-08!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.63e-12;1!UBERON:0001045;1.01e-11;1!UBERON:0010227;1.01e-11;1!UBERON:0005062;1.68e-11;4!UBERON:0007284;1.68e-11;4 | |||
|ontology_enrichment_disease=DOID:114!8.57e-09!2;DOID:1287!1.05e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:114;1.34e-22;2!DOID:178;3.64e-12;1!DOID:326;3.64e-12;1!DOID:3978;3.64e-12;1!DOID:3394;3.64e-12;1!DOID:5844;3.64e-12;1!DOID:1287;8.65e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.34e-22,2;DOID:178,3.65e-12,1;DOID:326,3.65e-12,1;DOID:3978,3.65e-12,1;DOID:3394,3.65e-12,1;DOID:5844,3.65e-12,1;DOID:1287,8.65e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.46e-12!7;UBERON:0002106!7.66e-11!3;UBERON:0004854!7.66e-11!3;UBERON:0009034!7.66e-11!3;UBERON:0002095!7.66e-11!3;UBERON:0004782!7.66e-11!3;UBERON:0003281!7.66e-11!3;UBERON:0009664!7.66e-11!3;UBERON:0002296!7.66e-11!3;UBERON:0005602!7.66e-11!3;UBERON:0001179!7.66e-11!3;UBERON:0006293!7.66e-11!3;UBERON:0003127!9.75e-08!2;UBERON:0007100!1.25e-07!27;UBERON:0005057!2.99e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.13e-21;2!UBERON:0005058;1.13e-21;2!UBERON:0009113;1.13e-21;2!UBERON:0007100;4.06e-20;25!UBERON:0003978;5.11e-15;3!UBERON:0000946;5.11e-15;3!UBERON:0002146;4.53e-12;1!UBERON:0005623;4.53e-12;1!UBERON:0002372;1.01e-11;1!UBERON:0002079;1.01e-11;1!UBERON:0001154;1.01e-11;1!UBERON:0002135;1.01e-11;1!UBERON:0001153;1.01e-11;1!UBERON:0009854;1.01e-11;1!UBERON:0001961;1.01e-11;1!UBERON:0001744;1.01e-11;1!UBERON:0001042;1.01e-11;1!UBERON:0001735;1.01e-11;1!UBERON:0004177;3.04e-09;5!UBERON:0005057;3.04e-09;5!UBERON:0000948;6.31e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.20e-18,27;UBERON:0003978,4.28e-15,3;UBERON:0009751,4.28e-15,3;UBERON:0000946,4.28e-15,3;UBERON:0002523,4.28e-15,3;UBERON:0005983,4.28e-15,3;UBERON:0002165,4.28e-15,3;UBERON:0002062,4.28e-15,3;UBERON:0007280,4.28e-15,3;UBERON:0002146,4.06e-12,1;UBERON:0005623,4.06e-12,1;UBERON:0002372,5.62e-12,1;UBERON:0001961,5.62e-12,1;UBERON:0001744,5.62e-12,1;UBERON:0001735,5.62e-12,1;UBERON:0002079,7.76e-12,1;UBERON:0002135,8.64e-12,1;UBERON:0001154,1.63e-11,1;UBERON:0001153,1.63e-11,1;UBERON:0001045,1.63e-11,1;UBERON:0002370,1.64e-11,4;UBERON:0005058,1.64e-11,4;UBERON:0009113,1.64e-11,4;UBERON:0003295,1.64e-11,4;UBERON:0005562,1.64e-11,4;UBERON:0001042,4.25e-10,10;UBERON:0009145,4.25e-10,10;UBERON:0006562,3.15e-09,11;UBERON:0003351,5.74e-08,6;UBERON:0007023,7.81e-08,114;UBERON:0000948,2.58e-07,24;UBERON:0005498,2.58e-07,24;UBERON:0004140,2.58e-07,24;UBERON:0009881,2.58e-07,24;UBERON:0004141,2.58e-07,24;UBERON:0003084,2.58e-07,24;UBERON:0007005,2.58e-07,24;UBERON:0004139,2.58e-07,24;UBERON:0004291,2.58e-07,24;UBERON:0003103,5.39e-07,68;UBERON:0004797,5.67e-07,7;UBERON:0004177,6.02e-07,7;UBERON:0005057,6.02e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,1.11443384277478,0,0,0.296964680832639,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.836822770498666,1.12198039399954,0.288950589901519,0,0,0,0,0,1.39641200636127,2.97908551215189,0,3.59422200898184,6.00916467391199,1.33902874465124,11.8914746301505,0,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,2.86859742932552,0,1.42939065274673,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0.988058159489721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0.265729680626726,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0.471797825567689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90603563420313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12929087541872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.386747327841463,0.999411559249289,0,0,0,0,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0.109265571963696,8.2354025657434,0,0,0,0,0,0,0,0,0.852935927603924,0,1.61472274590015,1.61394257169231,0,0,0,0.653150243690884,0,1.95320953742304,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p22@ALPK2 | |||
}} |
Revision as of 19:33, 20 January 2014
Short description: | p22@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_ALPK2_5end |
Coexpression cluster: | C1057_heart_teratocarcinoma_lymphangiectasia_plasma_adult_left_skeletal |
Association with transcript: | 19bp_to_ENST00000361673, NM_052947, uc002lhj.3_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.34e-22 | 2 |
vascular disease | 3.65e-12 | 1 |
ischemia | 3.65e-12 | 1 |
extrinsic cardiomyopathy | 3.65e-12 | 1 |
myocardial ischemia | 3.65e-12 | 1 |
myocardial infarction | 3.65e-12 | 1 |
cardiovascular system disease | 8.65e-12 | 4 |