FFCP PHASE1:Hg19::chr19:1826957..1826984,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:1826957..1826984,- | |||
|id=chr19:1826957..1826984,- | |||
|ontology_enrichment_celltype=CL:1000497!1.53e-10!18;CL:0002518!1.53e-10!18;CL:1000449!2.62e-10!16;CL:1000507!3.86e-08!12;CL:1000494!3.86e-08!12;CL:0002681!3.15e-07!13;CL:0002584!3.15e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000497;7.25e-32;17!CL:0002518;7.25e-32;17!CL:1000449;3.27e-29;15!CL:0002681;3.46e-22;12!CL:0002584;3.46e-22;12!CL:1000507;2.29e-20;10!CL:1000494;2.29e-20;10!CL:1000746;3.17e-20;7!CL:1000612;3.17e-20;7!CL:0000650;4.83e-13;2!CL:1000500;4.83e-13;2!CL:1000618;4.83e-13;2!CL:1001318;4.83e-13;2!CL:0002173;4.83e-13;2!CL:0002188;1.72e-10;5!CL:0000632;1.29e-08;3!CL:0000239;2.74e-08;3!CL:1000615;2.74e-08;3!CL:0002306;2.74e-08;3!CL:0000669;6.23e-07;4!CL:0000511;7.95e-07;1!CL:0002625;7.95e-07;1!CL:0000216;7.95e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,9.97e-32,17;CL:0002518,9.97e-32,17;CL:1000449,4.37e-29,15;CL:0002681,5.12e-22,12;CL:0002584,5.12e-22,12;CL:1000507,3.02e-20,10;CL:1000494,3.02e-20,10;CL:1000746,3.58e-20,7;CL:1000612,3.58e-20,7;CL:0000650,5.61e-13,2;CL:1000500,5.61e-13,2;CL:1000618,5.61e-13,2;CL:1001318,5.61e-13,2;CL:0002173,5.61e-13,2;CL:0002188,1.75e-10,5;CL:0000632,1.29e-08,3;CL:0000239,3.84e-08,3;CL:1000615,3.84e-08,3;CL:0002306,3.84e-08,3;CL:0000511,6.12e-07,1;CL:0002625,6.12e-07,1;CL:0000216,6.12e-07,1;CL:0000669,6.70e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.55e-10;10!UBERON:0005564;7.55e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;1.15e-11;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.22e-11,8 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002113;6.63e-32;24!UBERON:0011143;6.63e-32;24!UBERON:0006555;3.27e-29;15!UBERON:0004819;3.27e-29;15!UBERON:0001285;3.27e-29;15!UBERON:0007684;3.27e-29;15!UBERON:0000489;5.31e-26;29!UBERON:0005172;3.17e-25;52!UBERON:0005173;3.17e-25;52!UBERON:0006554;4.67e-25;30!UBERON:0001008;4.67e-25;30!UBERON:0001851;5.05e-23;15!UBERON:0000353;8.37e-23;15!UBERON:0001225;3.46e-22;12!UBERON:0008987;3.46e-22;12!UBERON:0004211;2.29e-20;10!UBERON:0009773;2.29e-20;10!UBERON:0001231;2.29e-20;10!UBERON:0004810;2.29e-20;10!UBERON:0000074;3.17e-20;7!UBERON:0001229;3.17e-20;7!UBERON:0002417;8.23e-17;58!UBERON:0000916;8.23e-17;58!UBERON:0003567;4.83e-13;2!UBERON:0003838;4.83e-13;2!UBERON:0003586;4.83e-13;2!UBERON:0005169;4.83e-13;2!UBERON:0002321;4.83e-13;2!UBERON:0005215;4.83e-13;2!UBERON:0002303;4.83e-13;2!UBERON:0002319;4.83e-13;2!UBERON:0000473;5.08e-12;8!UBERON:0005177;4.33e-10;99!UBERON:0002106;7.48e-09;3!UBERON:0003135;9.09e-09;11!UBERON:0006853;2.74e-08;3!UBERON:0007685;2.74e-08;3!UBERON:0004134;2.74e-08;3!UBERON:0003891;6.23e-07;4!UBERON:0003103;6.77e-07;61!UBERON:0000991;7.53e-07;21!UBERON:0001136;7.95e-07;1!UBERON:0001343;7.95e-07;1!UBERON:0004910;7.95e-07;1!UBERON:0004813;7.95e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,2.61e-34,54;UBERON:0005173,2.61e-34,54;UBERON:0002417,1.79e-30,60;UBERON:0000916,1.79e-30,60;UBERON:0002113,3.30e-29,26;UBERON:0003918,3.30e-29,26;UBERON:0011143,3.30e-29,26;UBERON:0005095,3.30e-29,26;UBERON:0007687,3.30e-29,26;UBERON:0004211,4.37e-29,15;UBERON:0009773,4.37e-29,15;UBERON:0001231,4.37e-29,15;UBERON:0001285,4.37e-29,15;UBERON:0007684,4.37e-29,15;UBERON:0004208,4.37e-29,15;UBERON:0006555,3.53e-27,16;UBERON:0004819,3.53e-27,16;UBERON:0000489,4.03e-24,31;UBERON:0001851,7.12e-23,15;UBERON:0000353,1.11e-22,15;UBERON:0003887,1.21e-22,12;UBERON:0001225,5.12e-22,12;UBERON:0008987,5.12e-22,12;UBERON:0004810,3.02e-20,10;UBERON:0010532,3.58e-20,7;UBERON:0000074,3.58e-20,7;UBERON:0001229,3.58e-20,7;UBERON:0001230,3.58e-20,7;UBERON:0003220,3.58e-20,7;UBERON:0005749,3.58e-20,7;UBERON:0004199,3.58e-20,7;UBERON:0004209,3.58e-20,7;UBERON:0004198,3.58e-20,7;UBERON:0004876,4.55e-18,11;UBERON:0005103,1.24e-17,8;UBERON:0000083,1.24e-17,8;UBERON:0009201,1.24e-17,8;UBERON:0006553,1.24e-17,8;UBERON:0003074,1.24e-17,8;UBERON:0003060,1.24e-17,8;UBERON:0005177,1.88e-16,101;UBERON:0000080,1.18e-15,9;UBERON:0002120,1.18e-15,9;UBERON:0004875,1.18e-15,9;UBERON:0005721,1.18e-15,9;UBERON:0005754,1.18e-15,9;UBERON:0007297,1.18e-15,9;UBERON:0006554,4.09e-15,47;UBERON:0001008,9.45e-15,48;UBERON:0009569,1.93e-14,112;UBERON:0000058,9.62e-14,19;UBERON:0003886,3.90e-13,54;UBERON:0003567,5.61e-13,2;UBERON:0003838,5.61e-13,2;UBERON:0003586,5.61e-13,2;UBERON:0005169,5.61e-13,2;UBERON:0002321,5.61e-13,2;UBERON:0005215,5.61e-13,2;UBERON:0002303,5.61e-13,2;UBERON:0002319,5.61e-13,2;UBERON:0000473,4.66e-12,8;UBERON:0002553,2.33e-11,61;UBERON:0003103,9.79e-10,68;UBERON:0003064,3.89e-09,28;UBERON:0002106,7.20e-09,3;UBERON:0004854,7.20e-09,3;UBERON:0009034,7.20e-09,3;UBERON:0002095,7.20e-09,3;UBERON:0004782,7.20e-09,3;UBERON:0003281,7.20e-09,3;UBERON:0009664,7.20e-09,3;UBERON:0002296,7.20e-09,3;UBERON:0005602,7.20e-09,3;UBERON:0001179,7.20e-09,3;UBERON:0006293,7.20e-09,3;UBERON:0003135,8.55e-09,11;UBERON:0006853,3.84e-08,3;UBERON:0007685,3.84e-08,3;UBERON:0004134,3.84e-08,3;UBERON:0003104,8.97e-08,160;UBERON:0009142,8.97e-08,160;UBERON:0002100,2.67e-07,199;UBERON:0001136,6.12e-07,1;UBERON:0001343,6.12e-07,1;UBERON:0004910,6.12e-07,1;UBERON:0005154,6.12e-07,1;UBERON:0005295,6.12e-07,1;UBERON:0004813,6.12e-07,1;UBERON:0005297,6.12e-07,1;UBERON:0005294,6.12e-07,1;UBERON:0010141,6.12e-07,1;UBERON:0005891,6.12e-07,1;UBERON:0003891,6.70e-07,4;UBERON:0000991,7.25e-07,21;UBERON:0009196,7.25e-07,21;UBERON:0009117,7.25e-07,21;UBERON:0005564,7.25e-07,21 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,1.35426486594342,0,0,0,0,0,0,0.329851300186716,0,0,0,0.56738522469114,0,0,0.521482918420201,0,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,7.59678637886733,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0.247266929278557,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,2.057870056657,2.94017422771084,0,0,0.590789906681404,0,0.368965315629341,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0.985326475791887,0.088048434013226,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0,0.179060963239896,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0,0,0,0,0,0,0.0868836144680828,0,0.686286847621712,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0.40101294060657,0.0920809889358963,0.229628896329213,0,0,0.902399225814824,0.462092022626489,4.70609861506113,2.92278449306521,0.844413031143006,1.13733384070897,0,1.29549549661284,1.54227252690289,6.23176806350862,3.01013864312912,1.01950509218015,0,1.11937377361089,0,0.261435451024901,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0.214840489736547,0.290033387828457,0.0852266274161009,0.0890320356467374,0.165284915360978,0.384380134730212,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0,0.19538809540204,1.9488432172667,0,0,0,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.179515288819544,0,0,0.366390373607449,1.06606955203727,0,0,0,2.70714792740617,2.35275041181287,3.18861015254101,1.3282761290693,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0.150323419414493,0.207376382794494,0,0,0,0,0.284609546029793,0,0,0,0,0.698906672968121,0,0,0,0.0821154570532092,0.193978032976839,0,0.225980740780532,0,0.397429223405979,0,0,0,0.640358984218058,0.19980960958213,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.98975697164723,0,0.164831716762333,0,0.0984274815147488,0,0,0.136203406111576,0.482259445395058,0.412618309791701,0,0,0,0.0607495566580247,0,3.94028536495991,1.36381929150995,0,0,0.191915197319445,0.714695326373367,0,0,0.542999601753713,0,0,0,0,0,0,0.293104467356165,0,0,0,0.342173675768659,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,3.43106546199881,0.260994291965212,0,0,0,0,0,0,0,0.192914038270915,0,2.81865670446741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,4.51261970095543,0,0,0.261906694481422,0.163771917510097,0,0,0,0.206686796501184,0.126831620387814,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0,0,0.131545547125698,0,0,0.078493092850514,0.314231179832004,0,0,6.0459725541214,0,0,0.158013611732727,0,0,0,0,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0.111855431797792,0,4.51096322434397,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,3.38342104727473,3.86747327841463,0,0,0,0.0802413666891683,0,0,0,0,0.339957450954573,0,0,0,0,0,0.252332849670158,0,0,0.61193297845189,0.26721740526556,2.29737248837112,0,10.457460354117,15.5419195490584,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0.342233301085281,0,0.143444410785353,0,0.0814032686109745,0.213454691755431,0,0,0,0.488965776731466,0.406896178315738,0,0,0 | |||
|short_description=p@chr19:1826957..1826984,- | |||
}} |
Revision as of 20:18, 20 January 2014
Short description: | p@chr19:1826957..1826984, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1826957..1826984, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 9.97e-32 | 17 |
kidney epithelial cell | 9.97e-32 | 17 |
epithelial cell of nephron | 4.37e-29 | 15 |
kidney cortical cell | 5.12e-22 | 12 |
renal cortical epithelial cell | 5.12e-22 | 12 |
kidney tubule cell | 3.02e-20 | 10 |
nephron tubule epithelial cell | 3.02e-20 | 10 |
glomerular cell | 3.58e-20 | 7 |
kidney corpuscule cell | 3.58e-20 | 7 |
mesangial cell | 5.61e-13 | 2 |
kidney interstitial cell | 5.61e-13 | 2 |
juxtaglomerular complex cell | 5.61e-13 | 2 |
renal interstitial pericyte | 5.61e-13 | 2 |
extraglomerular mesangial cell | 5.61e-13 | 2 |
glomerular endothelial cell | 1.75e-10 | 5 |
hepatic stellate cell | 1.29e-08 | 3 |
brush border epithelial cell | 3.84e-08 | 3 |
kidney cortex tubule cell | 3.84e-08 | 3 |
epithelial cell of proximal tubule | 3.84e-08 | 3 |
androgen binding protein secreting cell | 6.12e-07 | 1 |
seminiferous tubule epithelial cell | 6.12e-07 | 1 |
Sertoli cell | 6.12e-07 | 1 |
pericyte cell | 6.70e-07 | 4 |
Ontology term | p-value | n |
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