FFCP PHASE1:Hg19::chr19:43911262..43911269,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:43911262..43911269,+ | |||
|id=chr19:43911262..43911269,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.95e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.35e-09;32!CL:0000307;6.47e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.85e-09,32;CL:0000192,3.13e-08,43;CL:0000514,3.13e-08,43;CL:0000068,4.50e-07,3;CL:0000069,4.50e-07,3;CL:0000307,4.50e-07,3;CL:0000377,4.50e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;6.47e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;1.50e-07;56!UBERON:0001981;1.50e-07;56!UBERON:0004537;1.50e-07;56!UBERON:0003126;3.93e-07;7!UBERON:0001005;3.93e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007500,1.64e-10,59;UBERON:0001981,1.64e-10,59;UBERON:0004537,1.64e-10,59;UBERON:0006965,1.64e-10,59;UBERON:0001637,1.15e-09,42;UBERON:0003509,1.15e-09,42;UBERON:0004572,1.15e-09,42;UBERON:0000055,2.25e-08,68;UBERON:0003126,2.14e-07,7;UBERON:0001005,2.14e-07,7 | |||
|phase1_expression=0.908391896352783,1.2846031433459,0.845726424575827,0,0,0.872338524100369,0,0,0.522371256399677,0,0.697801167972428,0,0.791300934685361,0,0,0.672325146451775,0,0.730310090387373,0,0.123121058076788,0,0.313454721478088,0,0.547497700291537,0.251085279189606,0.0764134057479513,0,0.0787107813136792,0,0,0,0.919421224478927,1.50602959389125,2.58827807116751,0.154934401160603,0,0,0,1.40381113229099,0,0,0.32389366601898,0,0.581592955118259,0.377875943688809,0,0.929716147622738,1.23350366406548,0.309706370895104,0.28769239232215,2.30544635876191,0.236482229888585,2.06847408441971,1.93645405075148,2.70852973188684,2.25890807451126,0.545812300115692,0.674170453335254,0.306083892370903,0.962787081228281,1.27867425159808,0.329851300186716,0.598390972864896,0,0.580418477257168,1.70215567407342,1.86846674698672,1.00499466102697,1.0429658368404,0.217188844705117,1.21079900526674,0.368277635987565,1.58231193720442,0.422510572623884,0.212604299965044,0.209658645508376,0.336985893439485,0,0.964353520182481,0,0.79566670879636,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,2.35806457649499,0,0.334372990781356,0,0,0,0.668462741311041,0,0,0.812411591295047,0,0.130059347559878,0.164437904603676,0.276350017785848,0,0.741432815810302,0.802622484269139,1.04535523804977,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,1.06976078313403,0.144824403882799,0,0,0,0.361439152384566,3.00802746381534,0.144846518960824,0.795285947051099,2.43317435151318,0.189069634328136,0.665188192387692,0.087834785693126,0.261958150995425,0.364295288292542,0,0.324547393654683,0.696518949197069,0.398873881556595,0.476981248610684,0,0,1.19257444420023,0,0,2.26123176769604,0,0.550236083880135,2.08994966536811,0.258416759169329,0.35576626268671,0.33472061276467,0,1.52054421143703,0,0,0,0.0892997282840798,0,0,0,2.84779697870439,0.366403487860815,0,0,1.3082821564276,0,0.506522046658319,0.132409180813219,0,0.354668382198357,0.560677600142307,3.20246987189115,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0.516628905878827,0,0.989067717114227,0.910161361938026,0.718618141816238,0,0.250237039743928,0,0,0,0.300476117813194,0,0.358779271377724,0.213557388818567,0.423863802319124,0,0.103052529238439,0,0.37223371266318,0,0.0974370051611986,0,0.552299391853796,2.58633690910099,0.355009592516614,0,0.339121184620975,0.773043412653187,0.818238361772504,0.573609190778008,0,0.132529768321485,0,0,0,0,1.56449532329816,0.643240938192885,9.66944449467364,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0.134831308160164,0.392442930250692,0.38474715694639,1.4763109092493,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0.439001141634502,10.1161577931858,0,0,0,0,0,0,0.234817388471643,0.433099343283221,0.462985512576611,0.761016608938393,0.790204397959275,1.71697232418975,0.492434012174795,0.468008530278475,0.148631162288728,0,1.34385702559088,0.283550194484773,0.179117045405697,0,3.06706143332169,0,0.264145302039678,0.621984346622316,0,0.12624243342638,0,0.381988425558278,2.34434894420094,3.4214489204541,0,0.600686115687835,0.571652865261156,0.224262168690721,0.43596006883328,0.07333828582095,0.517086863031111,10.7296933755565,0.845302752556,0.531876233169741,0,0,0,0.266422179016099,0.142977993658148,1.08524321078289,0,0,0,0.791951872933429,0.301439377059586,0,0.399891964728228,0,0.502257091432126,8.43335757932127,0,0,0,0.289562613335158,1.43833425785268,0.179060963239896,0.224170287987055,0.394061520403854,0.646882724578552,0.513372145118994,0,0,0,0.167516265334349,0.637938751653163,1.49801404789436,2.99161459204025,0,0,0,0.271265023699736,0,0,0.157702415033935,0.117141414992713,3.31040709700491,15.9185252839189,2.0694614258501,0,1.29058417979192,0,0,0,0,0,0.106727557803444,0,0,0.30239029332968,1.48864684691266,0,1.12264037773229,1.66580894032411,2.04682899626681,0.804269605718038,1.48418066444991,0.308419387605311,0.177561725313127,0.0821271560138091,0.519254429183621,0.116210378459959,0,0.200506470303285,0.368323955743585,0.229628896329213,0.728364672026868,0,0.451199612907412,0,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0,0,0.541892875087706,0,0.764628819135115,0,0.223874754722178,0,0,0,0.656029291399411,0,1.23649213977267,0.0915694648183434,0.082509499920588,0.574265537996172,9.75090369054782,0,0,0,0,0.137836572484531,0.107420244868274,0.290033387828457,0,0.178064071293475,0.165284915360978,0,0.127612712494584,0.708104465988849,0.464845549297286,0,2.0911118104818,0.616067160352178,2.66153015158511,6.08953094452551,0.74129687641568,0,0,0.316379424718726,0.571890581771475,0,0.855877976067841,1.59101623962968,8.63443504219153,0.179872457583315,0.274537029736055,0.235624804691373,1.41527737101321,11.0957224821106,0,0,0,1.05650146756755,0.136499911407986,0.424216295861138,6.78048699721457,3.30819206127675,0.66343897524122,1.31535265576129,2.31510213706675,1.9676842561399,1.21746226177622,2.16876448669825,0,0,0.0982490410131212,2.49669736036875,0.354761064070598,0.211107635297664,0,0,0.349934720244983,1.73199802905922,5.3624182042863,2.17781969722645,0.0941438007767792,0.43050537267123,1.68471475667626,0.443430153536676,0,0.507447609232169,0,0,0.714695326373367,0.411362273086194,0,0,0.79312517629427,0.106824071127473,0,0.245040215981032,0.185803175125719,0,0,0.318852545457645,0,0,0,0,0,0.228234679033192,0,5.01268954180134,0.169291777801603,0.321176150207399,0.605399121573143,0,0.343505344755765,0,0.447352215784832,0,0,0.278406173895242,0,1.08182271390393,0,0,0,1.31857361344705,0,0.445773537109913,0,0.47748896947538,0,0.614321404198464,0,0.140669416410513,0.333926115068718,0.16480387422676,0,0.19924798825107,0.552567831062295,0.251932747854276,0.20453736500431,0.123084805461069,0.622079175323615,0.179736702294654,0.895105873378046,0.511572370226872,0.789147245095469,0,0,0,0.278304294485554,0,0.260427761085233,0.0874599999961957,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0.658156191461918,0.21787692703798,0.139423744278603,0.307801034015188,0.455768223388005,0,0.359030577639089,0,0.957003479195758,0.274792780205587,2.13213910407454,0,0,0,0,0,0,0.37950746544837,0,0.632994193584081,0.326465616318295,0.141353071433941,0.216388639742091,0,1.76915129006678,0.611030144933625,0,0.741383633679017,0.208843899010911,0.067401132980677,0,0.234264445725339,0.182454789215666,0.391329237864179,0.242780379534093,0.789168805698781,0,0.30607276163049,0.252746318513952,0.450970258243478,1.03688191397247,0,0.330991955875499,0.313932918407225,0,0.284609546029793,1.24807205711825,0.347119476670262,0.0979923974143777,0,0.698906672968121,0.343972064943233,0.0967563312890851,0,0.0821154570532092,0.678923115418936,0.353024506766001,0,0,0,0.253243183823515,0.195551382734803,0.320635281006135,0.85381197895741,0.599428828746391,0.144090417154106,0,0.171594997861965,1.1524383839052,0.124252535565433,0.471388069233591,0.271808412147228,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0.525774708558629,1.39641200636127,0,1.43574604915363,0,0.429226048136571,2.4548860318606,0.201550417460179,0,0,0.0787831823072236,0,0.13480708770837,0.0984274815147488,0,0,0.272406812223151,0.160753148465019,0.137539436597234,0,0.449947783103001,0,0,0,0.788057072991982,0.157363764404994,0.105600336519406,0.35857467866569,0,0.714695326373367,0.662091970365432,0,1.62899880526114,0,0.326587360109409,0,0.246277562248017,0.340776043570843,0.226624183040251,1.61207457045891,0,0.646414781807753,0.13223260174269,0.171086837884329,0,1.49502377594773,0,0.828478110694391,0,0.592834895693833,0.121792598380896,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0.310482014706917,0,0.124980407962107,0,0.570930667089935,0.470531639396343,3.74667924645505,0.434763085832475,0,0.233713309847224,0.554805861502613,0.189403005275089,0.754703705257725,0.889811221596536,0.457680136793847,0,0.15543720058278,0.443565449968902,0,0,0,1.24411862352257,0,1.5652351854352,0.601030435988874,1.14241563650639,0.406870733204662,0.363697318405119,0.107410557042488,0,0,0.800055529326307,0,0.336749488765919,0,0.192619830407303,0.428883182749851,0.521988583930423,0.453411851024545,0,0,0.179088841081487,0.617602894321944,0,0,0.192914038270915,0.337884881306145,0.512483037175893,0.345430341731199,0.607719912354764,0.276516872303462,1.36402216187572,0.930053882193542,0.327130788511688,6.55219697692825,0.491545817507439,0,0,0,0.688859918643263,0,0.184105950251841,0.279759015438889,0,0,0.107824811396682,0,0,0.169732529954025,0.212574920101683,0.247871528518004,0,0,0.0788617450012534,0,0.352675943690684,2.4499638188256,0.0642292250964595,0,0,0.41023272848151,0,0.0691572524642179,0.161475645631851,4.28308260777463,0.0981477185010256,0,0,0.231051332300676,1.1441462864015,0,0.198916222116275,0.150420656698515,0,0.781514011233092,0,0,0.147856086217045,0.135075169236789,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,2.97726707033577,0.175871244359621,0,0.535701835878287,0,0,0.227662191351298,0.266107110487916,0,0.342976018874837,0.271878931907327,0.0657727735628491,0.472775363535873,0,0.78493092850514,0.157115589916002,0,1.82631744101899,0.431855182437243,2.38875843943525,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0.430227358820278,0,0.255640214277473,4.23387050190929,0.22910686854405,0.93061915699296,0,0.447421727191169,0.098150233615243,0.121917924982269,0.647428837187895,0.615976841137482,1.1598144313382,0.485710993059139,0,0.198950775161368,0,0.11294608203896,0.329821550236287,0.150962843566674,0.694567422971502,0,0,0,0,0,0,0.4226557275834,0.339854229375634,0.563903507879121,0.322289439867886,0.0999411559249289,0,0,0.160482733378337,0,0.458729283404541,0.143339583151451,0,0.339957450954573,0.436350690340377,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0.829169439458779,0.310298987585686,0.639701945702943,0,0.387533459016037,0.248298857183432,0,0.190941474834495,0.202117188958219,0.435433495793923,0,0.202056159043763,0.215166616178029,0.665320713092027,0.325613074443898,0.640364075266293,0,0.179650404213174,0,0,1.22068853494722,1.33151354837103,0,0 | |||
|short_description=p@chr19:43911262..43911269,+ | |||
}} |
Revision as of 23:39, 20 January 2014
Short description: | p@chr19:43911262..43911269, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:43911262..43911269, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.85e-09 | 32 |
smooth muscle cell | 3.13e-08 | 43 |
smooth muscle myoblast | 3.13e-08 | 43 |
duct epithelial cell | 4.50e-07 | 3 |
branched duct epithelial cell | 4.50e-07 | 3 |
tracheal epithelial cell | 4.50e-07 | 3 |
tracheoblast | 4.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelial tube open at both ends | 1.64e-10 | 59 |
blood vessel | 1.64e-10 | 59 |
blood vasculature | 1.64e-10 | 59 |
vascular cord | 1.64e-10 | 59 |
artery | 1.15e-09 | 42 |
arterial blood vessel | 1.15e-09 | 42 |
arterial system | 1.15e-09 | 42 |
vessel | 2.25e-08 | 68 |
trachea | 2.14e-07 | 7 |
respiratory airway | 2.14e-07 | 7 |