FFCP PHASE1:Hg19::chr19:57183322..57183358,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-391bp_to_FJ997633_5end | |||
|coexpression_cluster_id=C3818 | |||
|description=CAGE_peak_1_at_FJ997633_5end | |||
|id=chr19:57183322..57183358,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.58e-09!7;CL:0000586!1.58e-09!7 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.23e-15;82!UBERON:0006215;3.22e-15;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.61e-66!115;UBERON:0001049!3.29e-60!57;UBERON:0005068!3.29e-60!57;UBERON:0006241!3.29e-60!57;UBERON:0007135!3.29e-60!57;UBERON:0002616!1.11e-49!59;UBERON:0003080!1.60e-45!42;UBERON:0003075!9.32e-45!86;UBERON:0007284!9.32e-45!86;UBERON:0002780!3.73e-44!41;UBERON:0001890!3.73e-44!41;UBERON:0006240!3.73e-44!41;UBERON:0000955!1.24e-43!69;UBERON:0006238!1.24e-43!69;UBERON:0001017!2.44e-43!82;UBERON:0005743!1.92e-42!86;UBERON:0002346!5.62e-42!90;UBERON:0000073!5.70e-42!94;UBERON:0001016!5.70e-42!94;UBERON:0002020!2.02e-36!34;UBERON:0003528!2.02e-36!34;UBERON:0001893!2.31e-36!34;UBERON:0002791!7.33e-35!33;UBERON:0001869!2.69e-33!32;UBERON:0003056!7.57e-33!61;UBERON:0001950!1.25e-29!20;UBERON:0002619!1.29e-29!22;UBERON:0000153!7.03e-27!129;UBERON:0007811!7.03e-27!129;UBERON:0000033!7.59e-27!123;UBERON:0000956!2.35e-25!25;UBERON:0000203!2.35e-25!25;UBERON:0004121!7.36e-25!169;UBERON:0000924!7.73e-24!173;UBERON:0006601!7.73e-24!173;UBERON:0003076!3.28e-15!15;UBERON:0003057!3.28e-15!15;UBERON:0000025!5.63e-14!194;UBERON:0002298!1.11e-13!8;UBERON:0001871!1.35e-13!7;UBERON:0004732!1.25e-12!13;UBERON:0002420!1.44e-12!9;UBERON:0007245!1.44e-12!9;UBERON:0010009!1.44e-12!9;UBERON:0010011!1.44e-12!9;UBERON:0000454!1.44e-12!9;UBERON:0002308!1.53e-12!9;UBERON:0000125!1.53e-12!9;UBERON:0004111!4.83e-12!241;UBERON:0000477!1.68e-11!286;UBERON:0004733!4.36e-11!12;UBERON:0002028!4.36e-11!12;UBERON:0007277!4.36e-11!12;UBERON:0000200!5.51e-11!6;UBERON:0000064!1.22e-09!219;UBERON:0009663!1.64e-09!7;UBERON:0001894!4.50e-09!7;UBERON:0006222!4.50e-09!7;UBERON:0002021!8.62e-09!5;UBERON:0000483!3.04e-08!309;UBERON:0000475!3.15e-08!365;UBERON:0000062!3.60e-08!511;UBERON:0000119!5.32e-08!312;UBERON:0002680!5.16e-07!9;UBERON:0001895!5.16e-07!9;UBERON:0010092!5.16e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.57e-63;53!UBERON:0002616;1.57e-63;53!UBERON:0002780;3.67e-61;41!UBERON:0001890;3.67e-61;41!UBERON:0003528;2.23e-59;34!UBERON:0002020;2.23e-59;34!UBERON:0002791;1.91e-58;32!UBERON:0001893;1.14e-57;34!UBERON:0001869;3.83e-57;32!UBERON:0002619;4.84e-49;22!UBERON:0001950;3.53e-47;20!UBERON:0000956;5.87e-43;25!UBERON:0000203;5.87e-43;25!UBERON:0000955;5.03e-35;68!UBERON:0004732;1.92e-34;13!UBERON:0001017;6.75e-33;75!UBERON:0000125;3.19e-32;9!UBERON:0002308;3.19e-32;9!UBERON:0004733;4.48e-30;12!UBERON:0002028;4.48e-30;12!UBERON:0001016;2.11e-28;83!UBERON:0000200;1.13e-27;6!UBERON:0002298;3.81e-27;6!UBERON:0002420;2.82e-25;9!UBERON:0007245;2.82e-25;9!UBERON:0010009;2.82e-25;9!UBERON:0010011;2.82e-25;9!UBERON:0000454;2.82e-25;9!UBERON:0009663;5.85e-24;7!UBERON:0002680;2.60e-18;9!UBERON:0001895;2.60e-18;9!UBERON:0001871;9.90e-17;6!UBERON:0001870;7.97e-15;3!UBERON:0007023;1.25e-14;114!UBERON:0001896;1.28e-14;3!UBERON:0005290;1.28e-14;3!UBERON:0000988;2.69e-14;3!UBERON:0002784;1.21e-11;4!UBERON:0003296;2.64e-11;4!UBERON:0010133;2.64e-11;4!UBERON:0001894;3.25e-11;7!UBERON:0000369;3.50e-11;4!UBERON:0002435;3.50e-11;4!UBERON:0000204;3.50e-11;4!UBERON:0001905;1.01e-10;2!UBERON:0002757;1.01e-10;2!UBERON:0010134;1.01e-10;2!UBERON:0005408;1.01e-10;2!UBERON:0001899;1.01e-10;2!UBERON:0011216;1.16e-10;132!UBERON:0002702;1.23e-10;2!UBERON:0005162;1.23e-10;2!UBERON:0000122;1.23e-10;2!UBERON:0001875;1.49e-10;2!UBERON:0006514;1.49e-10;2!UBERON:0002771;1.98e-10;2!UBERON:0002148;4.20e-10;2!UBERON:0006331;4.20e-10;2!UBERON:0009662;4.20e-10;2!UBERON:0000349;2.36e-09;5!UBERON:0001872;3.13e-09;5!UBERON:0002021;4.14e-09;5!UBERON:0010314;7.13e-09;132!UBERON:0002037;7.84e-08;6!UBERON:0005383;2.63e-07;3!UBERON:0005382;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.63e-112,53;UBERON:0002616,4.63e-112,53;UBERON:0001049,6.45e-112,56;UBERON:0005068,6.45e-112,56;UBERON:0006241,6.45e-112,56;UBERON:0007135,6.45e-112,56;UBERON:0000955,9.16e-85,68;UBERON:0006238,9.16e-85,68;UBERON:0002780,6.48e-82,41;UBERON:0001890,6.48e-82,41;UBERON:0003080,6.48e-82,41;UBERON:0006240,6.48e-82,41;UBERON:0003075,5.10e-79,82;UBERON:0007284,5.10e-79,82;UBERON:0002346,4.87e-75,86;UBERON:0001017,1.58e-74,81;UBERON:0003528,3.37e-72,34;UBERON:0002020,3.37e-72,34;UBERON:0001893,4.67e-72,34;UBERON:0001016,1.50e-70,89;UBERON:0002791,2.78e-64,32;UBERON:0001869,4.32e-64,32;UBERON:0010371,7.06e-61,104;UBERON:0003056,8.56e-58,61;UBERON:0007023,1.93e-49,114;UBERON:0010314,2.76e-49,132;UBERON:0002619,1.08e-48,22;UBERON:0001950,7.74e-47,20;UBERON:0000956,1.19e-42,25;UBERON:0000203,1.19e-42,25;UBERON:0004732,2.32e-34,13;UBERON:0004121,1.07e-33,171;UBERON:0000924,1.07e-33,171;UBERON:0006601,1.07e-33,171;UBERON:0000125,7.79e-33,9;UBERON:0002308,7.79e-33,9;UBERON:0004733,5.39e-30,12;UBERON:0002028,5.39e-30,12;UBERON:0007277,5.39e-30,12;UBERON:0003076,2.66e-29,15;UBERON:0003057,2.66e-29,15;UBERON:0000025,1.03e-27,192;UBERON:0000200,1.14e-27,6;UBERON:0011216,2.41e-27,223;UBERON:0002298,4.85e-27,6;UBERON:0002420,1.14e-25,9;UBERON:0007245,1.14e-25,9;UBERON:0010009,1.14e-25,9;UBERON:0010011,1.14e-25,9;UBERON:0000454,1.14e-25,9;UBERON:0009663,2.23e-24,7;UBERON:0004111,1.18e-20,240;UBERON:0002680,1.81e-18,9;UBERON:0001895,1.81e-18,9;UBERON:0010092,1.81e-18,9;UBERON:0001871,1.69e-16,6;UBERON:0000483,1.05e-15,306;UBERON:0000119,1.78e-15,309;UBERON:0001870,3.40e-15,3;UBERON:0000988,1.55e-14,3;UBERON:0001896,2.83e-14,3;UBERON:0005290,2.83e-14,3;UBERON:0010096,2.83e-14,3;UBERON:0002784,9.44e-12,4;UBERON:0000369,2.22e-11,4;UBERON:0002435,2.22e-11,4;UBERON:0000204,2.22e-11,4;UBERON:0010082,2.22e-11,4;UBERON:0003296,3.27e-11,4;UBERON:0010133,3.27e-11,4;UBERON:0001894,3.63e-11,7;UBERON:0006222,3.63e-11,7;UBERON:0001905,7.96e-11,2;UBERON:0002757,7.96e-11,2;UBERON:0010134,7.96e-11,2;UBERON:0005408,7.96e-11,2;UBERON:0001899,7.96e-11,2;UBERON:0001875,8.36e-11,2;UBERON:0006514,8.36e-11,2;UBERON:0002702,9.21e-11,2;UBERON:0005162,1.29e-10,2;UBERON:0000122,1.29e-10,2;UBERON:0002771,1.98e-10,2;UBERON:0002148,2.64e-10,2;UBERON:0006331,2.64e-10,2;UBERON:0009662,2.64e-10,2;UBERON:0000349,1.78e-09,5;UBERON:0001872,4.39e-09,5;UBERON:0002021,5.33e-09,5;UBERON:0002037,7.86e-08,6;UBERON:0006215,7.86e-08,6;UBERON:0005383,2.39e-07,3;UBERON:0005382,2.39e-07,3;UBERON:0000923,9.62e-07,560;UBERON:0010316,9.62e-07,560;UBERON:0005291,9.62e-07,560;UBERON:0006598,9.62e-07,560;UBERON:0010317,9.62e-07,560;UBERON:0002532,9.62e-07,560 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77901850772711,0,0.800791974072025,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0.994147647766298,4.3607519087259,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.556608588971108,0,0,0,0.724999575434793,0,0,0,0,0,0,0,3.37670028151142,1.52581736317083,6.85591411573593,2.36438095162838,0,0,0,0.230850775511391,0.341826167541004,0.46112780877612,0.269272933229316,0.325942115766024,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,1.48282492557489,0.802577647298789,0.937057782901357,0.182454789215666,0,0,0,1.20990716048664,1.22429104652196,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0.90392296312213,0,0,1.96263467463224,0.782205530939212,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,3.69644523008381,0,0,0,0.558564802544508,0.687481272035051,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,3.26888174667781,0,0.275078873194468,0,0,0.77380195455795,1.39723980313457,0,0.157611414598396,0.367182116944987,0.211200673038813,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,1.68067843270016,1.58679122091228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.46431517882356,4.00610978260799,1.14681839138014,2.10765197920019,1.36612086471044,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62691028688288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0.558644917973244,0,0,0,0,0,1.79841830270087,1.41696576325585,5.10828348982884,0.41023272848151,1.26035848110859,0.622415272177961,2.90656162137332,4.28308260777463,0,0,0,0,0,0,0,0.526472298444801,0.20170506870352,0,0.261906694481422,0,0,1.55336444622308,0.781078098613847,3.10030194751776,2.09272173639893,0,0,0,0,0,1.60710550763486,8.4070930554706,0,1.13831095675649,0,0,0,1.56330385846713,1.24968269769413,0,0,0.39246546425257,1.57115589916002,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0.301925687133347,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.981542335574726,1.78227840196252,0.8453114551668,0,0.281951753939561,0.193373663920732,0,0,0,0,0,0,2.15009374727177,0,0.339957450954573,2.61810414204226,0,0,0,0,0,0.546327859818478,0,0.203977659483963,0.26721740526556,0.459474497674225,0.250707539292375,0.0757786982182394,0.267964130156178,0.829169439458779,3.72358785102823,0,0,0.0645889098360061,0.124149428591716,0,0.381882949668989,0,0.217716747896961,0.342233301085281,0.26940821205835,0.143444410785353,0,0,0,0,0,0,1.1001729976458,0.406896178315738,0.665756774185513,0.201273793591026,0 | |||
|short_description=p1@FJ997633 | |||
}} |
Revision as of 01:19, 21 January 2014
Short description: | p1@FJ997633 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FJ997633_5end |
Coexpression cluster: | C3818_pineal_cerebellum_thalamus_optic_occipital_globus_pituitary |
Association with transcript: | -391bp_to_FJ997633_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data