FFCP PHASE1:Hg19::chr2:27301661..27301672,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11117 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19880 | |||
|TSSclassifier=strong | |||
|UniProt=Q96IH6 | |||
|association_with_transcript=-89bp_to_ENST00000544143_5end | |||
|coexpression_cluster_id=C1901 | |||
|description=CAGE_peak_4_at_EMILIN1_5end | |||
|id=chr2:27301661..27301672,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.89e-36!180;CL:0000680!7.90e-21!57;CL:0000056!7.90e-21!57;CL:0000355!7.90e-21!57;CL:0000057!2.02e-20!75;CL:0000187!7.44e-20!54;CL:0000183!5.26e-19!59;CL:0000393!9.32e-18!60;CL:0000211!9.32e-18!60;CL:0000192!2.38e-14!42;CL:0000514!2.38e-14!42;CL:0000048!1.16e-12!430;CL:0000723!1.55e-11!436;CL:0000034!5.98e-11!444;CL:0000359!1.13e-09!32;CL:0002620!3.30e-09!23;CL:0002494!6.30e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000134;7.38e-12;55!CL:0000187;9.78e-12;55!CL:0000723;3.50e-11;61!CL:0000192;9.12e-11;43!CL:0000048;1.03e-10;58!CL:0002620;3.07e-10;23!CL:0002320;8.38e-09;188!CL:0000393;8.98e-09;61!CL:0000211;8.98e-09;61!CL:0000057;2.69e-08;73!CL:0000034;3.69e-08;69!CL:0002494;4.54e-08;16!CL:0000359;7.03e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.49e-23,76;CL:0000680,1.25e-21,58;CL:0000056,1.25e-21,58;CL:0000355,1.25e-21,58;CL:0000187,1.83e-20,55;CL:0000048,1.39e-17,427;CL:0000393,1.19e-16,61;CL:0000211,1.19e-16,61;CL:0000723,1.58e-16,433;CL:0000034,3.49e-15,441;CL:0000192,4.50e-14,43;CL:0000514,4.50e-14,43;CL:0002620,3.99e-10,23;CL:0002494,3.38e-08,16;CL:0000359,3.99e-08,32;CL:0002320,1.87e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000355;1.27e-11;58!CL:0000514;9.12e-11;43 | |||
|ontology_enrichment_disease=DOID:2394!1.01e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.13e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.56e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.40e-25!83;UBERON:0002329!4.40e-25!83;UBERON:0003077!4.40e-25!83;UBERON:0003059!4.40e-25!83;UBERON:0007282!4.40e-25!83;UBERON:0009618!4.40e-25!83;UBERON:0007285!4.40e-25!83;UBERON:0004290!5.70e-24!70;UBERON:0002385!6.11e-22!63;UBERON:0001015!6.11e-22!63;UBERON:0000383!6.11e-22!63;UBERON:0001134!2.84e-21!61;UBERON:0002036!2.84e-21!61;UBERON:0003082!2.84e-21!61;UBERON:0000486!5.33e-18!82;UBERON:0005256!2.51e-17!143;UBERON:0004872!2.72e-11!84;UBERON:0000468!2.49e-10!659;UBERON:0000475!2.00e-09!365;UBERON:0002100!2.33e-09!216;UBERON:0000481!5.49e-09!347;UBERON:0002049!7.51e-09!79;UBERON:0007798!7.51e-09!79;UBERON:0000479!1.93e-08!787;UBERON:0000948!2.19e-08!24;UBERON:0005498!2.19e-08!24;UBERON:0004140!2.19e-08!24;UBERON:0009881!2.19e-08!24;UBERON:0004141!2.19e-08!24;UBERON:0003084!2.19e-08!24;UBERON:0007005!2.19e-08!24;UBERON:0004139!2.19e-08!24;UBERON:0004291!2.19e-08!24;UBERON:0001009!2.26e-08!113;UBERON:0007100!2.67e-08!27;UBERON:0000490!3.37e-08!138;UBERON:0004535!3.47e-08!110;UBERON:0001981!1.54e-07!60;UBERON:0007500!1.54e-07!60;UBERON:0004537!1.54e-07!60;UBERON:0006965!1.54e-07!60;UBERON:0003102!1.94e-07!95;UBERON:0002199!1.96e-07!45;UBERON:0002416!1.96e-07!45;UBERON:0003914!1.97e-07!118;UBERON:0004573!4.52e-07!33;UBERON:0004571!4.52e-07!33;UBERON:0003104!4.70e-07!238;UBERON:0009142!4.70e-07!238;UBERON:0001637!5.11e-07!42;UBERON:0003509!5.11e-07!42;UBERON:0004572!5.11e-07!42;UBERON:0000055!7.89e-07!69;UBERON:0001013!8.38e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.68e-12;31!UBERON:0001015;1.68e-12;31!UBERON:0000383;1.68e-12;31!UBERON:0002204;8.16e-09;70!UBERON:0002384;3.54e-08;198!UBERON:0004573;2.33e-07;33!UBERON:0004571;2.33e-07;33!UBERON:0001134;3.39e-07;16!UBERON:0002036;3.39e-07;16!UBERON:0000948;3.74e-07;22!UBERON:0001013;4.08e-07;14!UBERON:0001135;4.32e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,2.02e-24,71;UBERON:0003059,2.02e-24,71;UBERON:0007282,2.02e-24,71;UBERON:0004290,2.02e-24,71;UBERON:0009618,2.02e-24,71;UBERON:0007524,2.45e-24,73;UBERON:0003077,9.41e-24,72;UBERON:0007285,9.41e-24,72;UBERON:0002385,1.43e-22,64;UBERON:0001015,1.43e-22,64;UBERON:0000383,1.43e-22,64;UBERON:0001134,8.88e-22,62;UBERON:0002036,8.88e-22,62;UBERON:0003082,8.88e-22,62;UBERON:0007503,1.62e-21,78;UBERON:0000486,1.84e-19,83;UBERON:0003104,4.13e-19,160;UBERON:0009142,4.13e-19,160;UBERON:0005256,2.13e-18,122;UBERON:0000926,3.45e-14,315;UBERON:0004120,3.45e-14,315;UBERON:0006603,3.45e-14,315;UBERON:0002100,7.68e-10,199;UBERON:0004872,1.01e-09,83;UBERON:0000490,1.06e-09,148;UBERON:0002199,2.28e-09,46;UBERON:0002416,2.28e-09,46;UBERON:0003102,6.80e-09,99;UBERON:0000479,1.53e-08,773;UBERON:0002204,1.81e-08,167;UBERON:0004573,4.02e-08,33;UBERON:0004571,4.02e-08,33;UBERON:0000948,4.27e-08,24;UBERON:0005498,4.27e-08,24;UBERON:0004140,4.27e-08,24;UBERON:0009881,4.27e-08,24;UBERON:0004141,4.27e-08,24;UBERON:0003084,4.27e-08,24;UBERON:0007005,4.27e-08,24;UBERON:0004139,4.27e-08,24;UBERON:0004291,4.27e-08,24;UBERON:0001637,1.54e-07,42;UBERON:0003509,1.54e-07,42;UBERON:0004572,1.54e-07,42;UBERON:0002097,1.66e-07,41;UBERON:0002384,1.79e-07,371;UBERON:0001013,3.33e-07,14;UBERON:0007100,3.81e-07,27;UBERON:0001135,3.89e-07,15 | |||
|phase1_expression=1.63510541343501,11.5614282901131,3.38290569830331,6.00439790118782,14.3027550216732,12.2127393374052,5.06599756336621,1.89515962028049,3.3954131665979,1.22866968250754,1.39560233594486,0.218441372130172,0.791300934685361,6.43585035392242,7.95353701746998,31.5992818832334,16.8754467846714,15.3365118981348,12.6862527685532,1.96993692922861,7.75202626728161,10.657460530255,0.85870796139317,0.684372125364421,1.88313959392204,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,114.589227167562,33.5350429851818,1.91793842765295,0.361439152384566,1.00267582127178,4.34539556882471,2.3858578411533,4.37971383272372,0.661743720148475,1.77383517970051,0.614843499851882,1.11332214173056,0,0,0,0.174129737299267,0.664789802594326,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0.402829317109147,0,2.4406205754817,0,0,1.60739510911344,0.673588117878509,0.563057402416611,0,0,0,0,0,0,5.4666914686485,9.87717990983722,2.78059279707759,24.0942761429004,8.51204117276057,6.16745360156538,0,2.96001058100592,4.66816553099649,8.62148301246004,11.2788713148287,4.38936540170301,8.06646294271999,0.234321431833797,2.18512053781224,0.570471821544449,2.39117888882882,4.81481444439436,3.56120477609889,6.17983549489893,3.0623125688234,7.12439040408254,4.54633437173368,1.18800285728205,10.8797448882565,0.910161361938026,10.0606539854273,2.52504170931099,8.00758527180571,0.277064115484183,3.95079858792754,19.3087311353382,9.91571188783539,4.53728732640084,13.6336123123535,4.48470516518992,3.39091041855299,7.50227740211006,6.59536187126009,9.27505944164265,4.28068769562657,5.40084263172052,6.13853132515551,8.58274832429989,3.03764665519588,9.69876340912871,16.6854508482809,7.05264687593482,4.0694542154517,0,0,0,0.243947412259191,0.397589304964456,0.232387885739037,0.310983165046111,0,0.36497735907583,7.8224766164908,27.6593603422941,2.76269842704961,7.89425477654364,7.21879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,2.80483547606892,3.2925920906512,36.7521778463855,0,0.982827216677626,5.90789906681404,0,0,0.343135620597051,0,0,0,0,0.977424915930974,4.15973914111831,0,0.115930404975077,0,0.433099343283221,1.38895653772983,1.14152491340759,0,0,0.984868024349589,4.68008530278475,3.71577905721821,0,0,0,0,0,0,0,0.968532774145487,0.207328115540772,1.29707958075265,0.75745460055828,0.190493682876507,0,0,1.71072446022705,0.411309970813294,0.600686115687835,0,0.784917590417525,1.30788020649984,0.8800594298514,3.74887975697556,10.7296933755565,5.917119267892,5.58470044828228,3.12022310734098,2.82928111688356,4.25547396069835,7.99266537048298,7.29187767656553,11.9376753186117,12.3486050517115,1.62868092146868,8.88479871856365,8.71147060226772,1.20575750823834,0,1.89948683245908,0,1.00451418286425,4.21667878966063,2.63587341040741,4.59447743336456,8.5582143024431,3.76431397335706,12.7395319981238,1.25342674267927,0,0,0,0,0.254094624222463,0,0.773288812777695,0.335032530668698,0,0,0,0,6.25726607767613,11.5039219843726,4.6115054028955,6.03115498439341,5.88815663030634,2.52323864054295,4.91993942969395,2.40756879782175,20.4666753650386,3.10419213877515,2.65690239414175,3.87175253937577,6.0818530127658,7.44044398358414,5.83343820478455,0,0,0,0,0,2.11673205330776,2.23297027036899,1.53461973288062,9.82310330515758,2.30650468660262,1.02341449813341,2.41280881715411,10.3892646511494,9.40679132196199,10.8312652441008,1.72467027628999,12.9813607295905,9.52925103371666,0,0,0,8.03701137152247,19.4837549767187,14.5548100604961,0,0,0,0,0,1.13733384070897,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,1.23649213977267,0.0915694648183434,0,0,0.650060246036521,1.6068392984416,1.83674364755032,8.93481979264937,10.5917535561029,5.09995318192763,10.204923262486,16.3868864123078,6.05109054654316,3.02708921198907,0,0,0,0,0.464845549297286,11.6480568327337,1.3940745403212,3.08033580176089,1.59691809095107,0,2.40921484835096,5.86812035642164,0.744316738719335,0.632758849437452,5.71890581771475,4.60616024360401,18.8293154734925,1.59101623962968,9.41938368239076,9.713112709499,25.8064807951891,12.7237394533341,2.02182481573316,6.34041284692033,2.94880919367287,11.7032097381502,8.77368562672624,10.5650146756755,1.77449884830381,25.4529777516683,6.78048699721457,1.10273068709225,11.941901554342,9.20746859032902,2.89387767133344,9.18252652865286,0.608731130888112,4.3375289733965,9.57765048609621,0.860468113224309,2.06322986127554,0.7133421029625,8.51426553769435,4.43326034125095,7.90307743103764,1.13841952129715,15.3971276907792,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,2.3949524571938,1.1490322207942,0,0,0,0,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,7.99372723194768,0,0,0.586032717087576,0,0,0,0.23874448473769,0,0.921482106297696,0.994147647766298,0.562677665642051,0,0,0,6.37593562403423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| |||
|short_description=p4@EMILIN1 | |||
}} |
Revision as of 02:13, 21 January 2014
Short description: | p4@EMILIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EMILIN1_5end |
Coexpression cluster: | C1901_Cardiac_tridermal_Mesenchymal_sacrococcigeal_Hepatic_Smooth_Myoblast |
Association with transcript: | -89bp_to_ENST00000544143_5end |
EntrezGene: | EMILIN1 |
HGNC: | 19880 |
UniProt: | Q96IH6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.49e-23 | 76 |
muscle precursor cell | 1.25e-21 | 58 |
myoblast | 1.25e-21 | 58 |
multi-potent skeletal muscle stem cell | 1.25e-21 | 58 |
muscle cell | 1.83e-20 | 55 |
multi fate stem cell | 1.39e-17 | 427 |
electrically responsive cell | 1.19e-16 | 61 |
electrically active cell | 1.19e-16 | 61 |
somatic stem cell | 1.58e-16 | 433 |
stem cell | 3.49e-15 | 441 |
smooth muscle cell | 4.50e-14 | 43 |
smooth muscle myoblast | 4.50e-14 | 43 |
skin fibroblast | 3.99e-10 | 23 |
cardiocyte | 3.38e-08 | 16 |
vascular associated smooth muscle cell | 3.99e-08 | 32 |
connective tissue cell | 1.87e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.56e-09 | 14 |